RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 OSBPL5Q9H0X9 879 aaPredicted RBP12.74□□□□□ -0.37
GGPS1-201ENST00000282841 VAT1LQ9HCJ6 419 aa12.74□□□□□ -0.37
GGPS1-201ENST00000282841 FAM205CA6NFA0 338 aa12.74□□□□□ -0.37
GGPS1-201ENST00000282841 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
GGPS1-201ENST00000282841 EGFRP00533 1210 aa12.74□□□□□ -0.37
GGPS1-201ENST00000282841 IFNAR1P17181 557 aa12.74□□□□□ -0.37
GGPS1-201ENST00000282841 USP17L2Q6R6M4 530 aa12.74□□□□□ -0.37
GGPS1-201ENST00000282841 HHIPL2Q6UWX4 724 aa12.74□□□□□ -0.37
GGPS1-201ENST00000282841 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
GGPS1-201ENST00000282841 KIF3AQ9Y496 699 aa12.74□□□□□ -0.37
GGPS1-201ENST00000282841 MYH1P12882 1939 aa12.74□□□□□ -0.37
GGPS1-201ENST00000282841 NAV1Q8NEY1 1877 aa12.74□□□□□ -0.37
GGPS1-201ENST00000282841 NFKBIEO00221 500 aa12.73□□□□□ -0.37
GGPS1-201ENST00000282841 CDKL5O76039 1030 aa12.73□□□□□ -0.37
GGPS1-201ENST00000282841 PTGER2P43116 358 aa12.73□□□□□ -0.37
GGPS1-201ENST00000282841 PRELPP51888 382 aa12.73□□□□□ -0.37
GGPS1-201ENST00000282841 KIF23Q02241 960 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-201ENST00000282841 CXCL9Q07325 125 aa12.73□□□□□ -0.37
GGPS1-201ENST00000282841 ZDHHC15Q96MV8 337 aa12.73□□□□□ -0.37
GGPS1-201ENST00000282841 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.73□□□□□ -0.37
GGPS1-201ENST00000282841 VEZTQ9HBM0 779 aa12.73□□□□□ -0.37
GGPS1-201ENST00000282841 ISY1Q9ULR0 285 aaKnown RBP12.73□□□□□ -0.37
GGPS1-201ENST00000282841 GOLGA6L3A6NEY3 463 aa12.73□□□□□ -0.37
GGPS1-201ENST00000282841 TRIM22Q8IYM9 498 aa12.73□□□□□ -0.37
GGPS1-201ENST00000282841 IPO4Q8TEX9 1081 aaKnown RBP12.73□□□□□ -0.37
GGPS1-201ENST00000282841 GPKOWQ92917 476 aaPredicted RBP eCLIP12.73□□□□□ -0.37
GGPS1-201ENST00000282841 DNAJC18Q9H819 358 aa12.73□□□□□ -0.37
GGPS1-201ENST00000282841 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-201ENST00000282841 SERPINB13Q9UIV8 391 aa12.73□□□□□ -0.37
GGPS1-201ENST00000282841 FRMPD2Q68DX3 1309 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-201ENST00000282841 GDF11O95390 407 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 MARCKSP29966 332 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-201ENST00000282841 SLC35G1Q2M3R5 365 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 NIM1KQ8IY84 436 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 RNF214Q8ND24 703 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 SUPT20HQ8NEM7 779 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 CTCFLQ8NI51 663 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-201ENST00000282841 GOLGA6L4A6NEF3 574 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 UBE2HP62256 183 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 FUT2Q10981 343 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 TRIM29Q14134 588 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 PKN1Q16512 942 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 CC2D2BQ6DHV5 1058 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 RSBN1LQ6PCB5 846 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-201ENST00000282841 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 TAOK3Q9H2K8 898 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 ZSCAN16Q9H4T2 348 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-201ENST00000282841 SUGT1Q9Y2Z0 365 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 GJA3Q9Y6H8 435 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 DDX60LQ5H9U9 1706 aaKnown RBP12.72□□□□□ -0.37
GGPS1-201ENST00000282841 LAMB1P07942 1786 aa12.72□□□□□ -0.37
GGPS1-201ENST00000282841 ME1P48163 572 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 NBPF9Q3BBW0 867 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 HOMER1Q86YM7 354 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 FAM43AQ8N2R8 423 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 BICD2Q8TD16 824 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 ERCC4Q92889 916 aaPredicted RBP12.71□□□□□ -0.37
GGPS1-201ENST00000282841 CLIP2Q9UDT6 1046 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 MRVI1Q9Y6F6 885 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 SHMT1P34896 483 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 TGFB2P61812 414 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 AKAP17AQ02040 695 aaKnown RBP12.71□□□□□ -0.37
GGPS1-201ENST00000282841 EARS2Q5JPH6 523 aaKnown RBP12.71□□□□□ -0.37
GGPS1-201ENST00000282841 TMTC3Q6ZXV5 915 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 DIS3L2Q8IYB7 885 aaKnown RBP12.71□□□□□ -0.37
GGPS1-201ENST00000282841 PSMD1Q99460 953 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 PRDM4Q9UKN5 801 aa12.71□□□□□ -0.37
GGPS1-201ENST00000282841 A0A087WWV3 80 aa12.71□□□□□ -0.38
GGPS1-201ENST00000282841 USP17L5A8MUK1 530 aa12.71□□□□□ -0.38
GGPS1-201ENST00000282841 ZBTB22O15209 634 aa12.71□□□□□ -0.38
GGPS1-201ENST00000282841 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.38
GGPS1-201ENST00000282841 JAG1P78504 1218 aa12.71□□□□□ -0.38
GGPS1-201ENST00000282841 MYSM1Q5VVJ2 828 aa12.71□□□□□ -0.38
GGPS1-201ENST00000282841 MIGA2Q7L4E1 593 aa12.71□□□□□ -0.38
GGPS1-201ENST00000282841 ZNRF3Q9ULT6 936 aa12.71□□□□□ -0.38
GGPS1-201ENST00000282841 ASTN2O75129 1339 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-201ENST00000282841 CCDC196A0A1B0GTZ2 297 aa12.7□□□□□ -0.38
GGPS1-201ENST00000282841 NR1I2O75469 434 aa12.7□□□□□ -0.38
GGPS1-201ENST00000282841 PCP11498 1178 aaKnown RBP12.7□□□□□ -0.38
GGPS1-201ENST00000282841 PTMSP20962 102 aa12.7□□□□□ -0.38
GGPS1-201ENST00000282841 GABPAQ06546 454 aa12.7□□□□□ -0.38
GGPS1-201ENST00000282841 TMEM87AQ8NBN3 555 aa12.7□□□□□ -0.38
GGPS1-201ENST00000282841 CYTH3O43739 400 aa12.7□□□□□ -0.38
GGPS1-201ENST00000282841 MBD3O95983 291 aa12.7□□□□□ -0.38
GGPS1-201ENST00000282841 CKAP2LQ8IYA6 745 aa12.7□□□□□ -0.38
GGPS1-201ENST00000282841 OGFOD1Q8N543 542 aa12.7□□□□□ -0.38
GGPS1-201ENST00000282841 SCAND2PQ9GZW5 306 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-201ENST00000282841 DACT1Q9NYF0 836 aa12.7□□□□□ -0.38
GGPS1-201ENST00000282841 MAD2L2Q9UI95 211 aa12.7□□□□□ -0.38
GGPS1-201ENST00000282841 PCNTO95613 3336 aa12.7□□□□□ -0.38
GGPS1-201ENST00000282841 ROBO3Q96MS0 1386 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 DEXIO95424 95 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 RRP1BQ14684 758 aaKnown RBP12.69□□□□□ -0.38
GGPS1-201ENST00000282841 DLGAP5Q15398 846 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 SPECC1Q5M775 1068 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 NEDD1Q8NHV4 660 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 RASGRP4Q8TDF6 673 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 JDP2Q8WYK2 163 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms