RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 APOA5Q6Q788 366 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 TMEM139Q8IV31 216 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 FAM71BQ8TC56 605 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 SGSM3Q96HU1 749 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 MYL10Q9BUA6 226 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 ARMT1Q9H993 441 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 FAM169AQ9Y6X4 670 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 UBN2Q6ZU65 1347 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 BCL9O00512 1426 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 CDC27P30260 824 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 ATP2B2Q01814 1243 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 LRCH2Q5VUJ6 765 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 SUSD4Q5VX71 490 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 GBP6Q6ZN66 633 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.63□□□□□ -1.03
TRIM6-201ENST00000278302 SRGAP1Q7Z6B7 1085 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 ZNF34Q8IZ26 560 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 IFNL3Q8IZI9 196 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 HSD3B7Q9H2F3 369 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 MRPL44Q9H9J2 332 aaKnown RBP8.63□□□□□ -1.03
TRIM6-201ENST00000278302 SENP2Q9HC62 589 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 SLC12A7Q9Y666 1083 aa8.63□□□□□ -1.03
TRIM6-201ENST00000278302 ERLIN1O75477 346 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 SSRP1Q08945 709 aaKnown RBP8.62□□□□□ -1.03
TRIM6-201ENST00000278302 TTC19Q6DKK2 380 aaPredicted RBP8.62□□□□□ -1.03
TRIM6-201ENST00000278302 AFAP1L1Q8TED9 768 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 BAG1Q99933 345 aaPredicted RBP8.62□□□□□ -1.03
TRIM6-201ENST00000278302 SLC26A6Q9BXS9 759 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 CD248Q9HCU0 757 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 SEC31BQ9NQW1 1179 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 FANCLQ9NW38 375 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 NEDD4P46934 1319 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 TCRBV5S4A2TA0A5A2 114 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 MYO1FO00160 1098 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 ARHGAP6O43182 974 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 PFKFB1P16118 471 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 CMA1P23946 247 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 IGHMBP2P38935 993 aaKnown RBP8.62□□□□□ -1.03
TRIM6-201ENST00000278302 MFSD6Q6ZSS7 791 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 VPS37DQ86XT2 251 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 JMYQ8N9B5 988 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 GIMAP7Q8NHV1 300 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 NKX2-3Q8TAU0 364 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 HNRNPLLQ8WVV9 542 aaKnown RBP8.62□□□□□ -1.03
TRIM6-201ENST00000278302 NACAP1Q9BZK3 213 aa8.62□□□□□ -1.03
TRIM6-201ENST00000278302 FGFR2P21802 821 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 SYKP43405 635 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 RASGRF1Q13972 1273 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 SLC39A14Q15043 492 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 IGSF22Q8N9C0 903 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 IGDCC4Q8TDY8 1250 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 ACSBG1Q96GR2 724 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 ZSWIM5Q9P217 1185 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 LRP2BPQ9P2M1 347 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 SAMM50Q9Y512 469 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 SLC4A4Q9Y6R1 1079 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 MYH7P12883 1935 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 ABCA3Q99758 1704 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 ERICH2A1L162 156 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 BCAMP50895 628 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 NLRP12P59046 1061 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 ALX1Q15699 326 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 CCDC152Q4G0S7 254 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 ZKSCAN3Q9BRR0 538 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 KRT23Q9C075 422 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 CNNM2Q9H8M5 875 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 LY9Q9HBG7 655 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 NEBLO76041 1014 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 SYF2O95926 243 aaKnown RBP8.61□□□□□ -1.03
TRIM6-201ENST00000278302 PAX7P23759 505 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 USP5P45974 858 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 AKNAD1Q5T1N1 836 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 FAM43BQ6ZT52 329 aaPredicted RBP8.61□□□□□ -1.03
TRIM6-201ENST00000278302 CCDC82Q8N4S0 544 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 SMARCC1Q92922 1105 aaPredicted RBP8.61□□□□□ -1.03
TRIM6-201ENST00000278302 CCDC87Q9NVE4 849 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 RAB21Q9UL25 225 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 CAPN7Q9Y6W3 813 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 ITGB4P16144 1822 aa8.61□□□□□ -1.03
TRIM6-201ENST00000278302 FRMD3A2A2Y4 597 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 H0YHG0 523 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 EBAG9O00559 213 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 PRKAB2O43741 272 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 ATRNO75882 1429 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 BIRC2Q13490 618 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 SAFBQ15424 915 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM6-201ENST00000278302 VSTM4Q8IW00 320 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 NOA1Q8NC60 698 aaKnown RBP8.6□□□□□ -1.03
TRIM6-201ENST00000278302 WASF1Q92558 559 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 KAT14Q9H8E8 782 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 NIP7Q9Y221 180 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM6-201ENST00000278302 AKAP11Q9UKA4 1901 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 IRF6O14896 467 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 INPP5BP32019 993 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 WTAPQ15007 396 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 KIF4BQ2VIQ3 1234 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 MAP9Q49MG5 647 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 NAIF1Q69YI7 327 aaPredicted RBP8.6□□□□□ -1.03
TRIM6-201ENST00000278302 TRIM22Q8IYM9 498 aa8.6□□□□□ -1.03
TRIM6-201ENST00000278302 MIGA1Q8NAN2 632 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms