RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 U2AF2P26368 475 aaKnown RBP eCLIP25.58■■□□□ 1.69
CCDC7-201ENST00000277657 NOVP48745 357 aa25.58■■□□□ 1.69
CCDC7-201ENST00000277657 DALRD3Q5D0E6 543 aaKnown RBP25.58■■□□□ 1.69
CCDC7-201ENST00000277657 MYSM1Q5VVJ2 828 aa25.58■■□□□ 1.69
CCDC7-201ENST00000277657 VIL1P09327 827 aaKnown RBP25.57■■□□□ 1.68
CCDC7-201ENST00000277657 L1TD1Q5T7N2 865 aaKnown RBP25.57■■□□□ 1.68
CCDC7-201ENST00000277657 RSBN1LQ6PCB5 846 aaPredicted RBP25.57■■□□□ 1.68
CCDC7-201ENST00000277657 PGBD1Q96JS3 809 aa25.57■■□□□ 1.68
CCDC7-201ENST00000277657 FTOQ9C0B1 505 aaKnown RBP eCLIP25.57■■□□□ 1.68
CCDC7-201ENST00000277657 RTEL1Q9NZ71 1219 aa25.57■■□□□ 1.68
CCDC7-201ENST00000277657 SWAP70Q9UH65 585 aa25.57■■□□□ 1.68
CCDC7-201ENST00000277657 SERPINB13Q9UIV8 391 aa25.57■■□□□ 1.68
CCDC7-201ENST00000277657 KIF5BP33176 963 aa25.57■■□□□ 1.68
CCDC7-201ENST00000277657 RBM5P52756 815 aaKnown RBP eCLIP25.57■■□□□ 1.68
CCDC7-201ENST00000277657 PKN1Q16512 942 aa25.57■■□□□ 1.68
CCDC7-201ENST00000277657 FER1L6Q2WGJ9 1857 aa25.56■■□□□ 1.68
CCDC7-201ENST00000277657 MMP1P03956 469 aa25.56■■□□□ 1.68
CCDC7-201ENST00000277657 SRBD1Q8N5C6 995 aaKnown RBP25.56■■□□□ 1.68
CCDC7-201ENST00000277657 UPF1Q92900 1129 aaKnown RBP eCLIP25.56■■□□□ 1.68
CCDC7-201ENST00000277657 GMLQ99445 158 aa25.56■■□□□ 1.68
CCDC7-201ENST00000277657 TMEM47Q9BQJ4 181 aa25.56■■□□□ 1.68
CCDC7-201ENST00000277657 EHD4Q9H223 541 aa25.56■■□□□ 1.68
CCDC7-201ENST00000277657 CNTNAP5Q8WYK1 1306 aa25.56■■□□□ 1.68
CCDC7-201ENST00000277657 MYH8P13535 1937 aa25.56■■□□□ 1.68
CCDC7-201ENST00000277657 AKAP17AQ02040 695 aaKnown RBP25.55■■□□□ 1.68
CCDC7-201ENST00000277657 CEBPZQ03701 1054 aaKnown RBP25.55■■□□□ 1.68
CCDC7-201ENST00000277657 CCDC183Q5T5S1 534 aa25.55■■□□□ 1.68
CCDC7-201ENST00000277657 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.55■■□□□ 1.68
CCDC7-201ENST00000277657 POLR3EQ9NVU0 708 aa25.55■■□□□ 1.68
CCDC7-201ENST00000277657 FAM198AQ9UFP1 575 aa25.55■■□□□ 1.68
CCDC7-201ENST00000277657 CD2APQ9Y5K6 639 aa25.55■■□□□ 1.68
CCDC7-201ENST00000277657 PSMD14O00487 310 aa25.55■■□□□ 1.68
CCDC7-201ENST00000277657 HLA-DOAP06340 250 aa25.55■■□□□ 1.68
CCDC7-201ENST00000277657 GRM4Q14833 912 aa25.55■■□□□ 1.68
CCDC7-201ENST00000277657 ZFPM1Q8IX07 1006 aa25.55■■□□□ 1.68
CCDC7-201ENST00000277657 DHX36Q9H2U1 1008 aaKnown RBP25.55■■□□□ 1.68
CCDC7-201ENST00000277657 STX8Q9UNK0 236 aa25.55■■□□□ 1.68
CCDC7-201ENST00000277657 V9GY48 417 aaPredicted RBP25.55■■□□□ 1.68
CCDC7-201ENST00000277657 CFAP100Q494V2 611 aa25.54■■□□□ 1.68
CCDC7-201ENST00000277657 ZNRF3Q9ULT6 936 aa25.54■■□□□ 1.68
CCDC7-201ENST00000277657 SYCE3A1L190 88 aa25.53■■□□□ 1.68
CCDC7-201ENST00000277657 GOLGA6L4A6NEF3 574 aa25.53■■□□□ 1.68
CCDC7-201ENST00000277657 RAD17O75943 681 aa25.53■■□□□ 1.68
CCDC7-201ENST00000277657 CEP95Q96GE4 821 aa25.53■■□□□ 1.68
CCDC7-201ENST00000277657 SIPA1L1O43166 1804 aa25.53■■□□□ 1.68
CCDC7-201ENST00000277657 SHMT1P34896 483 aa25.53■■□□□ 1.68
CCDC7-201ENST00000277657 NASPP49321 788 aaPredicted RBP25.53■■□□□ 1.68
CCDC7-201ENST00000277657 MRE11P49959 708 aa25.53■■□□□ 1.68
CCDC7-201ENST00000277657 CACNB3P54284 484 aa25.53■■□□□ 1.68
CCDC7-201ENST00000277657 TPRNQ4KMQ1 711 aa25.53■■□□□ 1.68
CCDC7-201ENST00000277657 LRSAM1Q6UWE0 723 aa25.53■■□□□ 1.68
CCDC7-201ENST00000277657 TAOK2Q9UL54 1235 aa25.53■■□□□ 1.68
CCDC7-201ENST00000277657 IGKV6D-41A0A0C4DH26 115 aa25.52■■□□□ 1.68
CCDC7-201ENST00000277657 YEATS4O95619 227 aa25.52■■□□□ 1.68
CCDC7-201ENST00000277657 SAFBQ15424 915 aaKnown RBP eCLIP25.52■■□□□ 1.68
CCDC7-201ENST00000277657 NIM1KQ8IY84 436 aa25.52■■□□□ 1.68
CCDC7-201ENST00000277657 LINC00301Q8NCQ3 95 aa25.52■■□□□ 1.68
CCDC7-201ENST00000277657 SHISA4Q96DD7 197 aa25.52■■□□□ 1.68
CCDC7-201ENST00000277657 FOXP1Q9H334 677 aaPredicted RBP25.52■■□□□ 1.68
CCDC7-201ENST00000277657 MAD2L2Q9UI95 211 aa25.52■■□□□ 1.68
CCDC7-201ENST00000277657 KCNJ14Q9UNX9 436 aa25.52■■□□□ 1.68
CCDC7-201ENST00000277657 TOP1P11387 765 aaKnown RBP25.51■■□□□ 1.67
CCDC7-201ENST00000277657 LIG1P18858 919 aa25.51■■□□□ 1.67
CCDC7-201ENST00000277657 GNAQP50148 359 aa25.51■■□□□ 1.67
CCDC7-201ENST00000277657 PRMT6Q96LA8 375 aaPredicted RBP25.51■■□□□ 1.67
CCDC7-201ENST00000277657 GRPEL1Q9HAV7 217 aa25.51■■□□□ 1.67
CCDC7-201ENST00000277657 CLIC4Q9Y696 253 aa25.51■■□□□ 1.67
CCDC7-201ENST00000277657 AKR1B1P15121 316 aa25.51■■□□□ 1.67
CCDC7-201ENST00000277657 XBP1P17861 261 aa25.51■■□□□ 1.67
CCDC7-201ENST00000277657 PTGER2P43116 358 aa25.51■■□□□ 1.67
CCDC7-201ENST00000277657 GNL2Q13823 731 aaKnown RBP25.51■■□□□ 1.67
CCDC7-201ENST00000277657 NOSTRINQ8IVI9 506 aa25.51■■□□□ 1.67
CCDC7-201ENST00000277657 DIS3L2Q8IYB7 885 aaKnown RBP25.51■■□□□ 1.67
CCDC7-201ENST00000277657 TAOK3Q9H2K8 898 aa25.51■■□□□ 1.67
CCDC7-201ENST00000277657 TDRD3Q9H7E2 651 aaKnown RBP25.51■■□□□ 1.67
CCDC7-201ENST00000277657 GREB1LQ9C091 1923 aaPredicted RBP25.51■■□□□ 1.67
CCDC7-201ENST00000277657 SH3BP5LQ7L8J4 393 aa25.5■■□□□ 1.67
CCDC7-201ENST00000277657 KLHL34Q8N239 644 aa25.5■■□□□ 1.67
CCDC7-201ENST00000277657 MTMR4Q9NYA4 1195 aa25.5■■□□□ 1.67
CCDC7-201ENST00000277657 COL2A1P02458 1487 aaPredicted RBP25.5■■□□□ 1.67
CCDC7-201ENST00000277657 hCG_1642624A0A1W2PR95 340 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 PALM3A6NDB9 673 aaPredicted RBP25.49■■□□□ 1.67
CCDC7-201ENST00000277657 DDTLA6NHG4 134 aaPredicted RBP25.49■■□□□ 1.67
CCDC7-201ENST00000277657 BTBD18B2RXH4 712 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 ENTPD3O75355 529 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 LETM1O95202 739 aaPredicted RBP25.49■■□□□ 1.67
CCDC7-201ENST00000277657 XRCC6P12956 609 aaKnown RBP eCLIP25.49■■□□□ 1.67
CCDC7-201ENST00000277657 TCP10Q12799 353 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 ANO1Q5XXA6 986 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 STAG2Q8N3U4 1231 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 PHF20Q9BVI0 1012 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 PI4KBQ9UBF8 816 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 PPP1R1BQ9UD71 204 aaPredicted RBP25.49■■□□□ 1.67
CCDC7-201ENST00000277657 ATRNL1Q5VV63 1379 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 SPDYE2BA6NHP3 402 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 SPDYE6P0CI01 402 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 KCNG4Q8TDN1 519 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 DNAJC18Q9H819 358 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 HDAC9Q9UKV0 1011 aa25.49■■□□□ 1.67
CCDC7-201ENST00000277657 AGBL3Q8NEM8 1001 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms