RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-201ENST00000277575 MSANTD4Q8NCY6 345 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 TMEM63CQ9P1W3 806 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 ATP6V0A2Q9Y487 856 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 TCP10L2B9ZVM9 353 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 HSF2BPO75031 334 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 SCG2P13521 617 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 ICA1Q05084 483 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 WDR44Q5JSH3 913 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 ZNF589Q86UQ0 364 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-201ENST00000277575 DHX37Q8IY37 1157 aaKnown RBP12.6□□□□□ -0.39
USP6NL-201ENST00000277575 CCDC155Q8N6L0 562 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 FBXO18Q8NFZ0 1043 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 RASAL2Q9UJF2 1139 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 ADCY9O60503 1353 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 TRIM14Q14142 442 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 GOLGA1Q92805 767 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 PSTPIP2Q9H939 334 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 TBC1D7Q9P0N9 293 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 SERTAD1Q9UHV2 236 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 VWA3BQ502W6 1294 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 CCDC97Q96F63 343 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-201ENST00000277575 SASH1O94885 1247 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 PKP1Q13835 747 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 INF2Q27J81 1249 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 MYCT1Q8N699 235 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 DDX12PQ92771 950 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.6□□□□□ -0.39
USP6NL-201ENST00000277575 CSADQ9Y600 493 aa12.6□□□□□ -0.39
USP6NL-201ENST00000277575 ARAP3Q8WWN8 1544 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 MED23Q9ULK4 1368 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 PFKFB1P16118 471 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 ERCC3P19447 782 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 KRT9P35527 623 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 TMC4Q7Z404 712 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 NELFCDQ8IXH7 590 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 NT5C3AQ9H0P0 336 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 BLZF1Q9H2G9 400 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 TAB2Q9NYJ8 693 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 EXOC7Q9UPT5 735 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 FRMPD2Q68DX3 1309 aaPredicted RBP12.59□□□□□ -0.39
USP6NL-201ENST00000277575 ADCY10Q96PN6 1610 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 PPEF1O14829 653 aaPredicted RBP12.59□□□□□ -0.39
USP6NL-201ENST00000277575 CALUO43852 315 aaPredicted RBP12.59□□□□□ -0.39
USP6NL-201ENST00000277575 CA8P35219 290 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 STRN3Q13033 797 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 ZNF772Q68DY9 489 aaPredicted RBP12.59□□□□□ -0.39
USP6NL-201ENST00000277575 CCDC50Q8IVM0 306 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 TTLL11Q8NHH1 800 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 AZI2Q9H6S1 392 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 COMMD10Q9Y6G5 202 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 GAS7O60861 476 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 RXRBP28702 533 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 ADD2P35612 726 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 ZNF75DP51815 510 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 DCAF15Q66K64 600 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 TRMT44Q8IYL2 757 aaKnown RBP12.59□□□□□ -0.39
USP6NL-201ENST00000277575 SEPT12Q8IYM1 358 aa12.59□□□□□ -0.39
USP6NL-201ENST00000277575 GPHNQ9NQX3 736 aaPredicted RBP12.59□□□□□ -0.39
USP6NL-201ENST00000277575 SRP68Q9UHB9 627 aaKnown RBP12.59□□□□□ -0.39
USP6NL-201ENST00000277575 THRAP3Q9Y2W1 955 aaKnown RBP12.59□□□□□ -0.39
USP6NL-201ENST00000277575 EXOC3O60645 756 aa12.58□□□□□ -0.39
USP6NL-201ENST00000277575 KRT5P13647 590 aa12.58□□□□□ -0.39
USP6NL-201ENST00000277575 SLFN13Q68D06 897 aa12.58□□□□□ -0.39
USP6NL-201ENST00000277575 APOA5Q6Q788 366 aa12.58□□□□□ -0.39
USP6NL-201ENST00000277575 APBB1IPQ7Z5R6 666 aaPredicted RBP12.58□□□□□ -0.39
USP6NL-201ENST00000277575 NLRX1Q86UT6 975 aa12.58□□□□□ -0.39
USP6NL-201ENST00000277575 SMCR8Q8TEV9 937 aaPredicted RBP12.58□□□□□ -0.39
USP6NL-201ENST00000277575 KIAA1468Q9P260 1216 aa12.58□□□□□ -0.39
USP6NL-201ENST00000277575 PALLDQ8WX93 1383 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 ADGRL3Q9HAR2 1447 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 H7C1W4 665 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 DDAH1O94760 285 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 KIF4AO95239 1232 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 SCRN1Q12765 414 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 GSTA5Q7RTV2 222 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 GPKOWQ92917 476 aaPredicted RBP eCLIP12.58□□□□□ -0.41e-6■■■□□ 16.1
USP6NL-201ENST00000277575 CCDC17Q96LX7 622 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 PCDHA12Q9UN75 941 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 NOD1Q9Y239 953 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 ALAS1P13196 640 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 TNFAIP3P21580 790 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 TUBB4BP68371 445 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 SUSD4Q5VX71 490 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 TPH2Q8IWU9 490 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 CCDC77Q9BR77 488 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 FAM107BQ9H098 131 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 RGS12O14924 1447 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 DYNLL1P63167 89 aaKnown RBP12.58□□□□□ -0.4
USP6NL-201ENST00000277575 ZNF354CQ86Y25 554 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 OSBP2Q969R2 916 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 PRDM10Q9NQV6 1147 aa12.58□□□□□ -0.4
USP6NL-201ENST00000277575 ATP2A1O14983 1001 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 STX10O60499 249 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 GCNT3O95395 438 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 GTF2F1P35269 517 aaKnown RBP eCLIP12.57□□□□□ -0.4
USP6NL-201ENST00000277575 PNOCQ13519 176 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms