RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 U2AF2P26368 475 aaKnown RBP eCLIP16.21■□□□□ 0.19
TMEM47-201ENST00000275954 ISCA1Q9BUE6 129 aa16.21■□□□□ 0.19
TMEM47-201ENST00000275954 MCM6Q14566 821 aa16.2■□□□□ 0.18
TMEM47-201ENST00000275954 SLC39A14Q15043 492 aa16.2■□□□□ 0.18
TMEM47-201ENST00000275954 SYCP1Q15431 976 aa16.2■□□□□ 0.18
TMEM47-201ENST00000275954 CTAGE1Q96RT6 745 aa16.2■□□□□ 0.18
TMEM47-201ENST00000275954 EYA3Q99504 573 aa16.2■□□□□ 0.18
TMEM47-201ENST00000275954 ZNF277Q9NRM2 450 aaPredicted RBP16.2■□□□□ 0.18
TMEM47-201ENST00000275954 ZNF804BA4D1E1 1349 aa16.2■□□□□ 0.18
TMEM47-201ENST00000275954 PXDNQ92626 1479 aa16.2■□□□□ 0.18
TMEM47-201ENST00000275954 ZNF569Q5MCW4 686 aa16.2■□□□□ 0.18
TMEM47-201ENST00000275954 SPAG1Q07617 926 aa16.2■□□□□ 0.18
TMEM47-201ENST00000275954 RASGRP4Q8TDF6 673 aa16.2■□□□□ 0.18
TMEM47-201ENST00000275954 SLC4A9Q96Q91 983 aa16.2■□□□□ 0.18
TMEM47-201ENST00000275954 PYM1Q9BRP8 204 aaKnown RBP16.2■□□□□ 0.18
TMEM47-201ENST00000275954 FNBP4Q8N3X1 1017 aaPredicted RBP16.19■□□□□ 0.18
TMEM47-201ENST00000275954 WDR66Q8TBY9 1149 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 GOLGA6L9A6NEM1 432 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 ARID4AP29374 1257 aaPredicted RBP16.19■□□□□ 0.18
TMEM47-201ENST00000275954 ALDH1B1P30837 517 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 TAF3Q5VWG9 929 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 CYB5R4Q7L1T6 521 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 NIM1KQ8IY84 436 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 TAB2Q9NYJ8 693 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 GNA11P29992 359 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 TMEM87AQ8NBN3 555 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 ZMYND15Q9H091 742 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 BCL2L12Q9HB09 334 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 PPEF1O14829 653 aaPredicted RBP16.19■□□□□ 0.18
TMEM47-201ENST00000275954 CCNT1O60563 726 aaKnown RBP16.19■□□□□ 0.18
TMEM47-201ENST00000275954 MLKLQ8NB16 471 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 PKNOX2Q96KN3 472 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 DESI2Q9BSY9 194 aa16.19■□□□□ 0.18
TMEM47-201ENST00000275954 SALL3Q9BXA9 1300 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 WTIPA6NIX2 430 aaPredicted RBP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 SH2B2O14492 632 aaPredicted RBP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 RFX5P48382 616 aaPredicted RBP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 RAD51AP2Q09MP3 1159 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 ELF2Q15723 593 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 PNMA1Q8ND90 353 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 CUL5Q93034 780 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 HDAC9Q9UKV0 1011 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 RPAP1Q9BWH6 1393 aaPredicted RBP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 MED23Q9ULK4 1368 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 HMGB2P26583 209 aaKnown RBP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 MKRN3Q13064 507 aaKnown RBP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 KRT79Q5XKE5 535 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 KRBA2Q6ZNG9 492 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 LRRC8AQ8IWT6 810 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 SMYD4Q8IYR2 804 aaPredicted RBP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 TDRD7Q8NHU6 1098 aaKnown RBP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 MXD3Q9BW11 206 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 UBR1Q8IWV7 1749 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 AKR1B15C9JRZ8 316 aaPredicted RBP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 USO1O60763 962 aaKnown RBP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 EIF3JO75822 258 aaKnown RBP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 PLS1Q14651 629 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 ILDR1Q86SU0 546 aaPredicted RBP16.18■□□□□ 0.18
TMEM47-201ENST00000275954 ZNF609O15014 1411 aa16.18■□□□□ 0.18
TMEM47-201ENST00000275954 FAM196BA6NMK8 535 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 PLCG2P16885 1265 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 PTGDRQ13258 359 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 TMEM132AQ24JP5 1023 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 CAPZA3Q96KX2 299 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 CRACR2AQ9BSW2 395 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 CARD6Q9BX69 1037 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 ATP1A3P13637 1013 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 ODF2Q5BJF6 829 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 WWC2Q6AWC2 1192 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 COL23A1Q86Y22 540 aaPredicted RBP16.17■□□□□ 0.18
TMEM47-201ENST00000275954 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.17■□□□□ 0.18
TMEM47-201ENST00000275954 SAMM50Q9Y512 469 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 FGFR1OPO95684 399 aaKnown RBP16.17■□□□□ 0.18
TMEM47-201ENST00000275954 INF2Q27J81 1249 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 LEKR1Q6ZMV7 388 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 DYMQ7RTS9 669 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 FLAD1Q8NFF5 587 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 POLR3EQ9NVU0 708 aa16.17■□□□□ 0.18
TMEM47-201ENST00000275954 LUC7L2Q9Y383 392 aaKnown RBP16.17■□□□□ 0.18
TMEM47-201ENST00000275954 SYNRGQ9UMZ2 1314 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 RHOXF2BP0C7M4 288 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 NOP2P46087 812 aaKnown RBP16.16■□□□□ 0.18
TMEM47-201ENST00000275954 PDE4DQ08499 809 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 UBE4AQ14139 1066 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 KIAA1524Q8TCG1 905 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 RHOXF2Q9BQY4 288 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 GOLPH3LQ9H4A5 285 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 TAF4BQ92750 862 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 USP42Q9H9J4 1324 aaKnown RBP16.16■□□□□ 0.18
TMEM47-201ENST00000275954 A0A1W2PQ27 194 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 A0A1W2PQ64 194 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 A0A1W2PQD8 194 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 CCDC66A2RUB6 948 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 PRDX5P30044 214 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 GTF2F1P35269 517 aaKnown RBP eCLIP16.16■□□□□ 0.18
TMEM47-201ENST00000275954 USP8P40818 1118 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 CSRNP2Q9H175 543 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 PCDHB6Q9Y5E3 794 aa16.16■□□□□ 0.18
TMEM47-201ENST00000275954 ERVV-1B6SEH8 477 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms