RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 DEXIO95424 95 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 VIL1P09327 827 aaKnown RBP14.07□□□□□ -0.16
SDE2-201ENST00000272091 POLD1P28340 1107 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 SHMT1P34896 483 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 CEBPZQ03701 1054 aaKnown RBP14.07□□□□□ -0.16
SDE2-201ENST00000272091 IDI2Q9BXS1 227 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 RAD17O75943 681 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 RSBN1LQ6PCB5 846 aaPredicted RBP14.07□□□□□ -0.16
SDE2-201ENST00000272091 PNMA1Q8ND90 353 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 KCNJ14Q9UNX9 436 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 ARFGEF1Q9Y6D6 1849 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 IGKV6D-41A0A0C4DH26 115 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 PSDA5PKW4 1024 aaPredicted RBP14.07□□□□□ -0.16
SDE2-201ENST00000272091 PRPF3O43395 683 aaKnown RBP14.07□□□□□ -0.16
SDE2-201ENST00000272091 LIG1P18858 919 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 U2AF2P26368 475 aaKnown RBP eCLIP14.07□□□□□ -0.16
SDE2-201ENST00000272091 MYSM1Q5VVJ2 828 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 STAG2Q8N3U4 1231 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 LARGE2Q8N3Y3 721 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 MAD2L2Q9UI95 211 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 TAOK2Q9UL54 1235 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 CLIC4Q9Y696 253 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 DDTLA6NHG4 134 aaPredicted RBP14.06□□□□□ -0.16
SDE2-201ENST00000272091 MMP1P03956 469 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 BRAPQ7Z569 592 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 SYCE3A1L190 88 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 GOLGA6L3A6NEY3 463 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 NFKBIEO00221 500 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 AKR1B1P15121 316 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 VEGFAP15692 232 aaPredicted RBP14.06□□□□□ -0.16
SDE2-201ENST00000272091 GRM4Q14833 912 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 CFAP100Q494V2 611 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 CEP95Q96GE4 821 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 PRMT6Q96LA8 375 aaPredicted RBP14.06□□□□□ -0.16
SDE2-201ENST00000272091 KAT14Q9H8E8 782 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 DALRD3Q5D0E6 543 aaKnown RBP14.06□□□□□ -0.16
SDE2-201ENST00000272091 ATL3Q6DD88 541 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 TRIM22Q8IYM9 498 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 VPS33BQ9H267 617 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 RTEL1Q9NZ71 1219 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 CFAP45Q9UL16 551 aa14.06□□□□□ -0.16
SDE2-201ENST00000272091 MYH4Q9Y623 1939 aa14.05□□□□□ -0.16
SDE2-201ENST00000272091 RBM5P52756 815 aaKnown RBP eCLIP14.05□□□□□ -0.16
SDE2-201ENST00000272091 TCP10Q12799 353 aa14.05□□□□□ -0.16
SDE2-201ENST00000272091 WASF1Q92558 559 aa14.05□□□□□ -0.16
SDE2-201ENST00000272091 MAP3K14Q99558 947 aa14.05□□□□□ -0.16
SDE2-201ENST00000272091 TDRD3Q9H7E2 651 aaKnown RBP14.05□□□□□ -0.16
SDE2-201ENST00000272091 ZNF287Q9HBT7 754 aa14.05□□□□□ -0.16
SDE2-201ENST00000272091 SERPINB13Q9UIV8 391 aa14.05□□□□□ -0.16
SDE2-201ENST00000272091 ZBTB12Q9Y330 459 aaPredicted RBP14.05□□□□□ -0.16
SDE2-201ENST00000272091 V9GY48 417 aaPredicted RBP14.05□□□□□ -0.16
SDE2-201ENST00000272091 PRELPP51888 382 aa14.05□□□□□ -0.16
SDE2-201ENST00000272091 NPY5RQ15761 445 aa14.05□□□□□ -0.16
SDE2-201ENST00000272091 ZNF396Q96N95 335 aaPredicted RBP14.05□□□□□ -0.16
SDE2-201ENST00000272091 EHD4Q9H223 541 aa14.05□□□□□ -0.16
SDE2-201ENST00000272091 XRCC6P12956 609 aaKnown RBP eCLIP14.04□□□□□ -0.16
SDE2-201ENST00000272091 NASPP49321 788 aaPredicted RBP14.04□□□□□ -0.16
SDE2-201ENST00000272091 CCDC178Q5BJE1 867 aa14.04□□□□□ -0.16
SDE2-201ENST00000272091 SOGA3Q5TF21 947 aa14.04□□□□□ -0.16
SDE2-201ENST00000272091 CLEC10AQ8IUN9 316 aa14.04□□□□□ -0.16
SDE2-201ENST00000272091 OXER1Q8TDS5 423 aa14.04□□□□□ -0.16
SDE2-201ENST00000272091 BAZ2BQ9UIF8 2168 aaKnown RBP14.04□□□□□ -0.16
SDE2-201ENST00000272091 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
SDE2-201ENST00000272091 SHROOM1Q2M3G4 852 aaPredicted RBP14.04□□□□□ -0.16
SDE2-201ENST00000272091 LINC00301Q8NCQ3 95 aa14.04□□□□□ -0.16
SDE2-201ENST00000272091 CTCFLQ8NI51 663 aaPredicted RBP14.04□□□□□ -0.16
SDE2-201ENST00000272091 MYO3BQ8WXR4 1341 aa14.04□□□□□ -0.16
SDE2-201ENST00000272091 BTBD18B2RXH4 712 aa14.04□□□□□ -0.16
SDE2-201ENST00000272091 POLR3EQ9NVU0 708 aa14.04□□□□□ -0.16
SDE2-201ENST00000272091 VPS54Q9P1Q0 977 aa14.04□□□□□ -0.16
SDE2-201ENST00000272091 ZNRF3Q9ULT6 936 aa14.04□□□□□ -0.16
SDE2-201ENST00000272091 ADAMTS3O15072 1205 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 PHF20Q9BVI0 1012 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 GOLPH3LQ9H4A5 285 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 STX8Q9UNK0 236 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 CD2APQ9Y5K6 639 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 COL2A1P02458 1487 aaPredicted RBP14.03□□□□□ -0.16
SDE2-201ENST00000272091 PALM3A6NDB9 673 aaPredicted RBP14.03□□□□□ -0.16
SDE2-201ENST00000272091 FAM196BA6NMK8 535 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 CYTH3O43739 400 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 CCDC183Q5T5S1 534 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 LRSAM1Q6UWE0 723 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 SWAP70Q9UH65 585 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 ATRNL1Q5VV63 1379 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 DIS3L2Q8IYB7 885 aaKnown RBP14.03□□□□□ -0.16
SDE2-201ENST00000272091 GRPEL1Q9HAV7 217 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 MTMR4Q9NYA4 1195 aa14.03□□□□□ -0.16
SDE2-201ENST00000272091 PPP1R1BQ9UD71 204 aaPredicted RBP14.03□□□□□ -0.16
SDE2-201ENST00000272091 SPDYE2BA6NHP3 402 aa14.02□□□□□ -0.16
SDE2-201ENST00000272091 SPDYE6P0CI01 402 aa14.02□□□□□ -0.16
SDE2-201ENST00000272091 TOB1P50616 345 aaPredicted RBP14.02□□□□□ -0.16
SDE2-201ENST00000272091 CXCL9Q07325 125 aa14.02□□□□□ -0.16
SDE2-201ENST00000272091 NR5A1Q13285 461 aa14.02□□□□□ -0.16
SDE2-201ENST00000272091 TRIM29Q14134 588 aa14.02□□□□□ -0.16
SDE2-201ENST00000272091 NLGN2Q8NFZ4 835 aa14.02□□□□□ -0.16
SDE2-201ENST00000272091 NIM1KQ8IY84 436 aa14.02□□□□□ -0.17
SDE2-201ENST00000272091 PCDHA7Q9UN72 937 aa14.02□□□□□ -0.17
SDE2-201ENST00000272091 PTPAQ15257 358 aa14.02□□□□□ -0.17
SDE2-201ENST00000272091 ISY1Q9ULR0 285 aaKnown RBP14.02□□□□□ -0.17
SDE2-201ENST00000272091 CNTNAP1P78357 1384 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms