RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 SLC3A2P08195 630 aaKnown RBP26.73■■□□□ 1.87
RAB40B-201ENST00000269347 EZH2Q15910 746 aaKnown RBP26.73■■□□□ 1.87
RAB40B-201ENST00000269347 SASS6Q6UVJ0 657 aa26.73■■□□□ 1.87
RAB40B-201ENST00000269347 PHF20Q9BVI0 1012 aa26.73■■□□□ 1.87
RAB40B-201ENST00000269347 SCN9AQ15858 1988 aa26.73■■□□□ 1.87
RAB40B-201ENST00000269347 ZSCAN30Q86W11 494 aa26.73■■□□□ 1.87
RAB40B-201ENST00000269347 FAM163AQ96GL9 167 aaPredicted RBP26.73■■□□□ 1.87
RAB40B-201ENST00000269347 ZNF202O95125 648 aa26.72■■□□□ 1.87
RAB40B-201ENST00000269347 CMA1P23946 247 aa26.72■■□□□ 1.87
RAB40B-201ENST00000269347 FOXP1Q9H334 677 aaPredicted RBP26.72■■□□□ 1.87
RAB40B-201ENST00000269347 SLURP2P0DP57 97 aa26.71■■□□□ 1.87
RAB40B-201ENST00000269347 ZNF622Q969S3 477 aaKnown RBP eCLIP26.71■■□□□ 1.87
RAB40B-201ENST00000269347 ZNF830Q96NB3 372 aaPredicted RBP26.71■■□□□ 1.87
RAB40B-201ENST00000269347 PPP6R2O75170 966 aa26.71■■□□□ 1.87
RAB40B-201ENST00000269347 ATP2B1P20020 1258 aa26.71■■□□□ 1.87
RAB40B-201ENST00000269347 CHRNA5P30532 468 aa26.71■■□□□ 1.87
RAB40B-201ENST00000269347 EN1Q05925 392 aaPredicted RBP26.71■■□□□ 1.87
RAB40B-201ENST00000269347 MASTLQ96GX5 879 aa26.71■■□□□ 1.87
RAB40B-201ENST00000269347 COA1Q9GZY4 146 aa26.71■■□□□ 1.87
RAB40B-201ENST00000269347 MKNK2Q9HBH9 465 aa26.71■■□□□ 1.87
RAB40B-201ENST00000269347 CABP5Q9NP86 173 aa26.71■■□□□ 1.87
RAB40B-201ENST00000269347 DDX4Q9NQI0 724 aaKnown RBP26.71■■□□□ 1.87
RAB40B-201ENST00000269347 ZNF219Q9P2Y4 722 aaPredicted RBP26.71■■□□□ 1.87
RAB40B-201ENST00000269347 HPSEQ9Y251 543 aa26.71■■□□□ 1.87
RAB40B-201ENST00000269347 PCDHAC2Q9Y5I4 1007 aa26.71■■□□□ 1.87
RAB40B-201ENST00000269347 QSER1Q2KHR3 1735 aa26.7■■□□□ 1.87
RAB40B-201ENST00000269347 ZNF165P49910 485 aa26.7■■□□□ 1.87
RAB40B-201ENST00000269347 IQCB1Q15051 598 aa26.7■■□□□ 1.87
RAB40B-201ENST00000269347 DPP8Q6V1X1 898 aaPredicted RBP26.7■■□□□ 1.87
RAB40B-201ENST00000269347 TMC4Q7Z404 712 aa26.7■■□□□ 1.87
RAB40B-201ENST00000269347 RBM28Q9NW13 759 aaKnown RBP26.7■■□□□ 1.87
RAB40B-201ENST00000269347 NOL7Q9UMY1 257 aaKnown RBP26.7■■□□□ 1.87
RAB40B-201ENST00000269347 CDK8P49336 464 aa26.7■■□□□ 1.86
RAB40B-201ENST00000269347 SCNN1DP51172 638 aa26.7■■□□□ 1.86
RAB40B-201ENST00000269347 PPP2R5BQ15173 497 aa26.7■■□□□ 1.86
RAB40B-201ENST00000269347 NOL10Q9BSC4 688 aaKnown RBP26.7■■□□□ 1.86
RAB40B-201ENST00000269347 MTMR7Q9Y216 660 aa26.7■■□□□ 1.86
RAB40B-201ENST00000269347 PDE6BP35913 854 aa26.69■■□□□ 1.86
RAB40B-201ENST00000269347 PNMA1Q8ND90 353 aa26.69■■□□□ 1.86
RAB40B-201ENST00000269347 TNFRSF25Q93038 417 aa26.69■■□□□ 1.86
RAB40B-201ENST00000269347 ZC3H12CQ9C0D7 883 aaKnown RBP26.69■■□□□ 1.86
RAB40B-201ENST00000269347 DBNDD1Q9H9R9 158 aa26.69■■□□□ 1.86
RAB40B-201ENST00000269347 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.69■■□□□ 1.86
RAB40B-201ENST00000269347 ZNF646O15015 1829 aaPredicted RBP26.69■■□□□ 1.86
RAB40B-201ENST00000269347 CALM1P0DP23 149 aa26.68■■□□□ 1.86
RAB40B-201ENST00000269347 CALM2P0DP24 149 aa26.68■■□□□ 1.86
RAB40B-201ENST00000269347 CALM3P0DP25 149 aa26.68■■□□□ 1.86
RAB40B-201ENST00000269347 HS1BP3Q53T59 392 aa26.68■■□□□ 1.86
RAB40B-201ENST00000269347 TBC1D22AQ8WUA7 517 aa26.68■■□□□ 1.86
RAB40B-201ENST00000269347 IGSF3O75054 1194 aa26.68■■□□□ 1.86
RAB40B-201ENST00000269347 C16orf86Q6ZW13 317 aa26.68■■□□□ 1.86
RAB40B-201ENST00000269347 CTCFLQ8NI51 663 aaPredicted RBP26.68■■□□□ 1.86
RAB40B-201ENST00000269347 CPVLQ9H3G5 476 aa26.68■■□□□ 1.86
RAB40B-201ENST00000269347 TSPY3P0CV98 308 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 TSPY8P0CW00 308 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 SAFBQ15424 915 aaKnown RBP eCLIP26.67■■□□□ 1.86
RAB40B-201ENST00000269347 RESP18Q5W5W9 173 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 C2CD5Q86YS7 1000 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 ANKS1AQ92625 1134 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 MAD2L2Q9UI95 211 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 FBXO2Q9UK22 296 aaPredicted RBP26.67■■□□□ 1.86
RAB40B-201ENST00000269347 CTAGE5O15320 804 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 ALDH1B1P30837 517 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 PICALMQ13492 652 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 DGKHQ86XP1 1220 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 FLAD1Q8NFF5 587 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 TMEM47Q9BQJ4 181 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 SDF4Q9BRK5 362 aa26.67■■□□□ 1.86
RAB40B-201ENST00000269347 CYTH3O43739 400 aa26.66■■□□□ 1.86
RAB40B-201ENST00000269347 AKAP17AQ02040 695 aaKnown RBP26.66■■□□□ 1.86
RAB40B-201ENST00000269347 TYW1BQ6NUM6 668 aa26.66■■□□□ 1.86
RAB40B-201ENST00000269347 KAT14Q9H8E8 782 aa26.66■■□□□ 1.86
RAB40B-201ENST00000269347 TTF2Q9UNY4 1162 aaKnown RBP26.66■■□□□ 1.86
RAB40B-201ENST00000269347 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.66■■□□□ 1.86
RAB40B-201ENST00000269347 USP49Q70CQ1 688 aa26.65■■□□□ 1.86
RAB40B-201ENST00000269347 CAMKK2Q96RR4 588 aa26.65■■□□□ 1.86
RAB40B-201ENST00000269347 RGPD3A6NKT7 1758 aaPredicted RBP26.65■■□□□ 1.86
RAB40B-201ENST00000269347 RGPD4Q7Z3J3 1758 aa26.65■■□□□ 1.86
RAB40B-201ENST00000269347 ZNF444Q8N0Y2 327 aaPredicted RBP26.65■■□□□ 1.86
RAB40B-201ENST00000269347 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.65■■□□□ 1.86
RAB40B-201ENST00000269347 KIAA1468Q9P260 1216 aa26.65■■□□□ 1.86
RAB40B-201ENST00000269347 ZKSCAN5Q9Y2L8 839 aa26.65■■□□□ 1.86
RAB40B-201ENST00000269347 FAM237AA0A1B0GTK4 181 aa26.64■■□□□ 1.86
RAB40B-201ENST00000269347 FOXN1O15353 648 aa26.64■■□□□ 1.86
RAB40B-201ENST00000269347 GOLGA8HP0CJ92 632 aa26.64■■□□□ 1.86
RAB40B-201ENST00000269347 DPCR1Q3MIW9 517 aa26.64■■□□□ 1.86
RAB40B-201ENST00000269347 DHX40Q8IX18 779 aaKnown RBP26.64■■□□□ 1.86
RAB40B-201ENST00000269347 GPKOWQ92917 476 aaPredicted RBP eCLIP26.64■■□□□ 1.86
RAB40B-201ENST00000269347 CCDC39Q9UFE4 941 aa26.64■■□□□ 1.86
RAB40B-201ENST00000269347 STX8Q9UNK0 236 aa26.64■■□□□ 1.86
RAB40B-201ENST00000269347 BIN1O00499 593 aa26.64■■□□□ 1.85
RAB40B-201ENST00000269347 SLC15A2Q16348 729 aa26.64■■□□□ 1.85
RAB40B-201ENST00000269347 STX1AQ16623 288 aa26.64■■□□□ 1.85
RAB40B-201ENST00000269347 EYA3Q99504 573 aa26.64■■□□□ 1.85
RAB40B-201ENST00000269347 TCP11L1Q9NUJ3 509 aa26.64■■□□□ 1.85
RAB40B-201ENST00000269347 KRT2P35908 639 aa26.63■■□□□ 1.85
RAB40B-201ENST00000269347 SYKP43405 635 aa26.63■■□□□ 1.85
RAB40B-201ENST00000269347 LONRF3Q496Y0 759 aa26.63■■□□□ 1.85
RAB40B-201ENST00000269347 RILPL1Q5EBL4 403 aa26.63■■□□□ 1.85
RAB40B-201ENST00000269347 ISM2Q6H9L7 571 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms