RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 DGKHQ86XP1 1220 aa18.79■□□□□ 0.6
PCTP-201ENST00000268896 PNMA1Q8ND90 353 aa18.79■□□□□ 0.6
PCTP-201ENST00000268896 TMEM47Q9BQJ4 181 aa18.79■□□□□ 0.6
PCTP-201ENST00000268896 TCP11L1Q9NUJ3 509 aa18.79■□□□□ 0.6
PCTP-201ENST00000268896 NID2Q14112 1375 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 GOLGA6L22H0YM25 854 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 ENTPD3O75355 529 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 DDAH1O94760 285 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 NCLP19338 710 aaKnown RBP18.78■□□□□ 0.6
PCTP-201ENST00000268896 LMNB1P20700 586 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
PCTP-201ENST00000268896 TBC1D10BQ4KMP7 808 aaPredicted RBP18.78■□□□□ 0.6
PCTP-201ENST00000268896 RASGRP2Q7LDG7 609 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 C8orf76Q96K31 380 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 CSRNP1Q96S65 589 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.78■□□□□ 0.6
PCTP-201ENST00000268896 CNOT7Q9UIV1 285 aaKnown RBP18.78■□□□□ 0.6
PCTP-201ENST00000268896 CCDC196A0A1B0GTZ2 297 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 hCG_1642624A0A1W2PR95 340 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 MYO1BO43795 1136 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 CTCFLQ8NI51 663 aaPredicted RBP18.78■□□□□ 0.6
PCTP-201ENST00000268896 ALG1Q9BT22 464 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 EHD4Q9H223 541 aa18.78■□□□□ 0.6
PCTP-201ENST00000268896 CALM1P0DP23 149 aa18.77■□□□□ 0.6
PCTP-201ENST00000268896 CALM2P0DP24 149 aa18.77■□□□□ 0.6
PCTP-201ENST00000268896 CALM3P0DP25 149 aa18.77■□□□□ 0.6
PCTP-201ENST00000268896 IFNAR1P17181 557 aa18.77■□□□□ 0.6
PCTP-201ENST00000268896 RPS12P25398 132 aaKnown RBP18.77■□□□□ 0.6
PCTP-201ENST00000268896 GUCY1A2P33402 732 aa18.77■□□□□ 0.6
PCTP-201ENST00000268896 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.6
PCTP-201ENST00000268896 TPRNQ4KMQ1 711 aa18.77■□□□□ 0.6
PCTP-201ENST00000268896 CCDC178Q5BJE1 867 aa18.77■□□□□ 0.6
PCTP-201ENST00000268896 CDAN1Q8IWY9 1227 aa18.77■□□□□ 0.6
PCTP-201ENST00000268896 MTMR14Q8NCE2 650 aa18.77■□□□□ 0.6
PCTP-201ENST00000268896 PIBF1Q8WXW3 757 aa18.77■□□□□ 0.6
PCTP-201ENST00000268896 TMEM39BQ9GZU3 492 aa18.77■□□□□ 0.6
PCTP-201ENST00000268896 CNPY2Q9Y2B0 182 aa18.77■□□□□ 0.6
PCTP-201ENST00000268896 CNTNAP1P78357 1384 aa18.76■□□□□ 0.59
PCTP-201ENST00000268896 PRPF40AO75400 957 aaKnown RBP18.76■□□□□ 0.59
PCTP-201ENST00000268896 NPM3O75607 178 aaKnown RBP18.76■□□□□ 0.59
PCTP-201ENST00000268896 FMNL1O95466 1100 aaPredicted RBP18.76■□□□□ 0.59
PCTP-201ENST00000268896 NT5C2P49902 561 aa18.76■□□□□ 0.59
PCTP-201ENST00000268896 RCAN1P53805 252 aa18.76■□□□□ 0.59
PCTP-201ENST00000268896 ATP2B2Q01814 1243 aa18.76■□□□□ 0.59
PCTP-201ENST00000268896 DNM1Q05193 864 aaKnown RBP18.76■□□□□ 0.59
PCTP-201ENST00000268896 ASTN2O75129 1339 aaPredicted RBP18.76■□□□□ 0.59
PCTP-201ENST00000268896 GDF11O95390 407 aa18.76■□□□□ 0.59
PCTP-201ENST00000268896 NBPF11Q86T75 865 aa18.76■□□□□ 0.59
PCTP-201ENST00000268896 RBM28Q9NW13 759 aaKnown RBP18.76■□□□□ 0.59
PCTP-201ENST00000268896 TCHHQ07283 1943 aa18.75■□□□□ 0.59
PCTP-201ENST00000268896 ZNF280AP59817 542 aaPredicted RBP18.75■□□□□ 0.59
PCTP-201ENST00000268896 CERKLQ49MI3 558 aaPredicted RBP18.75■□□□□ 0.59
PCTP-201ENST00000268896 TRIM22Q8IYM9 498 aa18.75■□□□□ 0.59
PCTP-201ENST00000268896 LRRC47Q8N1G4 583 aaKnown RBP18.75■□□□□ 0.59
PCTP-201ENST00000268896 FAM151AQ8WW52 585 aa18.75■□□□□ 0.59
PCTP-201ENST00000268896 ANKS1AQ92625 1134 aa18.75■□□□□ 0.59
PCTP-201ENST00000268896 ZBED3Q96IU2 234 aaPredicted RBP18.75■□□□□ 0.59
PCTP-201ENST00000268896 RNF181Q9P0P0 153 aa18.75■□□□□ 0.59
PCTP-201ENST00000268896 ATP6V1DQ9Y5K8 247 aa18.75■□□□□ 0.59
PCTP-201ENST00000268896 FIBPO43427 364 aa18.74■□□□□ 0.59
PCTP-201ENST00000268896 RESTQ13127 1097 aa18.74■□□□□ 0.59
PCTP-201ENST00000268896 STAG2Q8N3U4 1231 aa18.74■□□□□ 0.59
PCTP-201ENST00000268896 ATRNL1Q5VV63 1379 aa18.74■□□□□ 0.59
PCTP-201ENST00000268896 PDIA4P13667 645 aaKnown RBP18.74■□□□□ 0.59
PCTP-201ENST00000268896 GSE1Q14687 1217 aa18.74■□□□□ 0.59
PCTP-201ENST00000268896 TMTC3Q6ZXV5 915 aa18.74■□□□□ 0.59
PCTP-201ENST00000268896 FOXP4Q8IVH2 680 aaPredicted RBP18.74■□□□□ 0.59
PCTP-201ENST00000268896 SRBD1Q8N5C6 995 aaKnown RBP18.74■□□□□ 0.59
PCTP-201ENST00000268896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.74■□□□□ 0.59
PCTP-201ENST00000268896 MTMR4Q9NYA4 1195 aa18.74■□□□□ 0.59
PCTP-201ENST00000268896 CLIP2Q9UDT6 1046 aa18.74■□□□□ 0.59
PCTP-201ENST00000268896 SBF1O95248 1867 aa18.74■□□□□ 0.59
PCTP-201ENST00000268896 TRAK2O60296 914 aa18.73■□□□□ 0.59
PCTP-201ENST00000268896 GOLGA8HP0CJ92 632 aa18.73■□□□□ 0.59
PCTP-201ENST00000268896 MIGA2Q7L4E1 593 aa18.73■□□□□ 0.59
PCTP-201ENST00000268896 DPF2Q92785 391 aa18.73■□□□□ 0.59
PCTP-201ENST00000268896 LMBRD1Q9NUN5 540 aa18.73■□□□□ 0.59
PCTP-201ENST00000268896 PLIN4Q96Q06 1357 aa18.73■□□□□ 0.59
PCTP-201ENST00000268896 STK36Q9NRP7 1315 aa18.73■□□□□ 0.59
PCTP-201ENST00000268896 TOP1P11387 765 aaKnown RBP18.73■□□□□ 0.59
PCTP-201ENST00000268896 AKAP17AQ02040 695 aaKnown RBP18.73■□□□□ 0.59
PCTP-201ENST00000268896 KIF4BQ2VIQ3 1234 aa18.73■□□□□ 0.59
PCTP-201ENST00000268896 FBXO18Q8NFZ0 1043 aa18.73■□□□□ 0.59
PCTP-201ENST00000268896 V9GY48 417 aaPredicted RBP18.73■□□□□ 0.59
PCTP-201ENST00000268896 BAZ2BQ9UIF8 2168 aaKnown RBP18.72■□□□□ 0.59
PCTP-201ENST00000268896 IGKV6D-41A0A0C4DH26 115 aa18.72■□□□□ 0.59
PCTP-201ENST00000268896 PPP2R5BQ15173 497 aa18.72■□□□□ 0.59
PCTP-201ENST00000268896 TFIP11Q9UBB9 837 aaKnown RBP18.72■□□□□ 0.59
PCTP-201ENST00000268896 MAD2L2Q9UI95 211 aa18.72■□□□□ 0.59
PCTP-201ENST00000268896 DICER1Q9UPY3 1922 aaKnown RBP18.72■□□□□ 0.59
PCTP-201ENST00000268896 H7C1D1 291 aa18.71■□□□□ 0.59
PCTP-201ENST00000268896 RAD21O60216 631 aa18.71■□□□□ 0.59
PCTP-201ENST00000268896 KIF5BP33176 963 aa18.71■□□□□ 0.59
PCTP-201ENST00000268896 FUT2Q10981 343 aa18.71■□□□□ 0.59
PCTP-201ENST00000268896 RRP1BQ14684 758 aaKnown RBP18.71■□□□□ 0.59
PCTP-201ENST00000268896 GRM4Q14833 912 aa18.71■□□□□ 0.59
PCTP-201ENST00000268896 KRT40Q6A162 431 aa18.71■□□□□ 0.59
PCTP-201ENST00000268896 TATDN1Q6P1N9 297 aa18.71■□□□□ 0.59
PCTP-201ENST00000268896 USP17L2Q6R6M4 530 aa18.71■□□□□ 0.59
PCTP-201ENST00000268896 USP48Q86UV5 1035 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms