RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 MAGEB6Q8N7X4 407 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 LRRC2Q9BYS8 371 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 MIS12Q9H081 205 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 MAN1A1P33908 653 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 LONP1P36776 959 aaKnown RBP13.32□□□□□ -0.28
SRRM4-201ENST00000267260 PRG4Q92954 1404 aaPredicted RBP13.32□□□□□ -0.28
SRRM4-201ENST00000267260 POLR2DO15514 142 aaKnown RBP13.32□□□□□ -0.28
SRRM4-201ENST00000267260 RNASE9P60153 205 aaKnown RBP13.32□□□□□ -0.28
SRRM4-201ENST00000267260 SFMBT2Q5VUG0 894 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 GRAMD4Q6IC98 578 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 CCDC51Q96ER9 411 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 SPZ1Q9BXG8 430 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 ZBTB3Q9H5J0 574 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 CUTAO60888 179 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 RAD51AP2Q09MP3 1159 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 CCDC138Q96M89 665 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 NLRP3Q96P20 1036 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 ARHGEF10LQ9HCE6 1279 aa13.32□□□□□ -0.28
SRRM4-201ENST00000267260 LMNB1P20700 586 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 CSRNP1Q96S65 589 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 PTPDC1A2A3K4 754 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 SUN1O94901 812 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 GSTA1P08263 222 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 GSTA2P09210 222 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 EFHD1Q9BUP0 239 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 ZBTB21Q9ULJ3 1066 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 TRIM37O94972 964 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 KCNA4P22459 653 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 GARSP41250 739 aaKnown RBP13.31□□□□□ -0.28
SRRM4-201ENST00000267260 SAR1BQ9Y6B6 198 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 IFIH1Q9BYX4 1025 aaKnown RBP13.31□□□□□ -0.28
SRRM4-201ENST00000267260 HELLSQ9NRZ9 838 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 MCM9Q9NXL9 1143 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 SOS1Q07889 1333 aaPredicted RBP13.31□□□□□ -0.28
SRRM4-201ENST00000267260 ZBTB24O43167 697 aaPredicted RBP13.31□□□□□ -0.28
SRRM4-201ENST00000267260 AK2P54819 239 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 PPP2R5DQ14738 602 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 VPS37BQ9H9H4 285 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 MRFAP1Q9Y605 127 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 HNRNPCL2B2RXH8 293 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 SART1O43290 800 aaKnown RBP13.31□□□□□ -0.28
SRRM4-201ENST00000267260 HNRNPCL1O60812 293 aaKnown RBP13.31□□□□□ -0.28
SRRM4-201ENST00000267260 LIG3P49916 1009 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 PPP2R5BQ15173 497 aa13.31□□□□□ -0.28
SRRM4-201ENST00000267260 GFAPP14136 432 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 ANKRD2Q9GZV1 360 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 CCDC169A6NNP5 214 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 ALDH1L1O75891 902 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 PICALMQ13492 652 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 PDZD4Q76G19 769 aaPredicted RBP13.3□□□□□ -0.28
SRRM4-201ENST00000267260 SND1Q7KZF4 910 aaKnown RBP eCLIP13.3□□□□□ -0.28
SRRM4-201ENST00000267260 VPS16Q9H269 839 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 KDM3AQ9Y4C1 1321 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 RNF113AO15541 343 aaKnown RBP13.3□□□□□ -0.28
SRRM4-201ENST00000267260 RPSAP08865 295 aaKnown RBP13.3□□□□□ -0.28
SRRM4-201ENST00000267260 MAP3K1Q13233 1512 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 ABCC5O15440 1437 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 ARHGEF35A5YM69 484 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 KRT81Q14533 505 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 ANKRD44Q8N8A2 993 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 BBOF1Q8ND07 529 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 KCNH3Q9ULD8 1083 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 AMOTL2Q9Y2J4 779 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.3□□□□□ -0.28
SRRM4-201ENST00000267260 THAP12O43422 761 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 SKIP12755 728 aa13.3□□□□□ -0.28
SRRM4-201ENST00000267260 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.3□□□□□ -0.28
SRRM4-201ENST00000267260 PPWD1Q96BP3 646 aaKnown RBP13.3□□□□□ -0.28
SRRM4-201ENST00000267260 POTEB3A0JP26 581 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
SRRM4-201ENST00000267260 POTEBQ6S5H4 581 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 POLR3CQ9BUI4 534 aaPredicted RBP13.29□□□□□ -0.28
SRRM4-201ENST00000267260 TPCN1Q9ULQ1 816 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 CREB3O43889 395 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 NLRP12P59046 1061 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 C16orf87Q6PH81 154 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 TRIM42Q8IWZ5 723 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 ANKRD42Q8N9B4 389 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 TEKT2Q9UIF3 430 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 DNMBPQ6XZF7 1577 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 ATP5J2-PTCD1G3V325 749 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 MAP3K7O43318 606 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 LDHBP07195 334 aaKnown RBP13.29□□□□□ -0.28
SRRM4-201ENST00000267260 TSHZ3Q63HK5 1081 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 KIFC3Q9BVG8 833 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 MRPL44Q9H9J2 332 aaKnown RBP13.29□□□□□ -0.28
SRRM4-201ENST00000267260 BCAS4Q8TDM0 211 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 MBIPQ9NS73 344 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 A0A1B0GVL5 298 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 APBA1Q02410 837 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 KLHL7Q8IXQ5 586 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 TRIML1Q8N9V2 468 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 N4BP2L2Q92802 583 aaPredicted RBP13.29□□□□□ -0.28
SRRM4-201ENST00000267260 TSC22D3Q99576 134 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 NOP56O00567 594 aaKnown RBP13.29□□□□□ -0.28
SRRM4-201ENST00000267260 FANCCQ00597 558 aa13.29□□□□□ -0.28
SRRM4-201ENST00000267260 GCNT3O95395 438 aa13.28□□□□□ -0.28
SRRM4-201ENST00000267260 LMNAP02545 664 aaKnown RBP13.28□□□□□ -0.28
SRRM4-201ENST00000267260 ATP6V0A1Q93050 837 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms