RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 BIN2Q9UBW5 565 aaPredicted RBP17.27■□□□□ 0.36
TIMP3-201ENST00000266085 ZMYM6O95789 1325 aa17.27■□□□□ 0.36
TIMP3-201ENST00000266085 MAATS1Q7Z4T9 603 aa17.27■□□□□ 0.36
TIMP3-201ENST00000266085 CEP112Q8N8E3 955 aa17.27■□□□□ 0.36
TIMP3-201ENST00000266085 TMEM63CQ9P1W3 806 aa17.27■□□□□ 0.36
TIMP3-201ENST00000266085 DDX39AO00148 427 aaKnown RBP17.27■□□□□ 0.35
TIMP3-201ENST00000266085 PRKAB2O43741 272 aa17.27■□□□□ 0.35
TIMP3-201ENST00000266085 MAP2K1Q02750 393 aaPredicted RBP17.27■□□□□ 0.35
TIMP3-201ENST00000266085 POSTNQ15063 836 aa17.27■□□□□ 0.35
TIMP3-201ENST00000266085 HERC4Q5GLZ8 1057 aaPredicted RBP17.27■□□□□ 0.35
TIMP3-201ENST00000266085 FRMD4BQ9Y2L6 1034 aa17.27■□□□□ 0.35
TIMP3-201ENST00000266085 IVNS1ABPQ9Y6Y0 642 aa17.27■□□□□ 0.35
TIMP3-201ENST00000266085 FRMPD2Q68DX3 1309 aaPredicted RBP17.27■□□□□ 0.35
TIMP3-201ENST00000266085 DIP2CQ9Y2E4 1556 aa17.27■□□□□ 0.35
TIMP3-201ENST00000266085 ARHGEF35A5YM69 484 aa17.27■□□□□ 0.35
TIMP3-201ENST00000266085 M0R2C6 588 aa17.27■□□□□ 0.35
TIMP3-201ENST00000266085 SNAP23O00161 211 aa17.27■□□□□ 0.35
TIMP3-201ENST00000266085 MMP10P09238 476 aa17.27■□□□□ 0.35
TIMP3-201ENST00000266085 FANCCQ00597 558 aa17.27■□□□□ 0.35
TIMP3-201ENST00000266085 ICA1Q05084 483 aa17.27■□□□□ 0.35
TIMP3-201ENST00000266085 RASGRF1Q13972 1273 aa17.27■□□□□ 0.35
TIMP3-201ENST00000266085 RGS12O14924 1447 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 TMEM87AQ8NBN3 555 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 FERMT1Q9BQL6 677 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 MED23Q9ULK4 1368 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 CETN3O15182 167 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 PAK1Q13153 545 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 DYMQ7RTS9 669 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 FMNL3Q8IVF7 1028 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 BLIDQ8IZY5 108 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 SYNRGQ9UMZ2 1314 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 C1orf167Q5SNV9 1468 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 PCP11498 1178 aaKnown RBP17.26■□□□□ 0.35
TIMP3-201ENST00000266085 SCRN1Q12765 414 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 ZNF569Q5MCW4 686 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 ARHGAP27Q6ZUM4 889 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 CCDC91Q7Z6B0 441 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 PI4K2BQ8TCG2 481 aa17.26■□□□□ 0.35
TIMP3-201ENST00000266085 CCDC169A6NNP5 214 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 SCG2P13521 617 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 NLRP12P59046 1061 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 RAPGEF1Q13905 1077 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 FBXO18Q8NFZ0 1043 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 EPB41P11171 864 aaKnown RBP17.25■□□□□ 0.35
TIMP3-201ENST00000266085 RAD51AP2Q09MP3 1159 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 APOA5Q6Q788 366 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 SYT10Q6XYQ8 523 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 KCNQ2O43526 872 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 MTX1Q13505 466 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 LCORLQ8N3X6 602 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 HARSP12081 509 aaKnown RBP17.25■□□□□ 0.35
TIMP3-201ENST00000266085 DNM3Q9UQ16 869 aa17.25■□□□□ 0.35
TIMP3-201ENST00000266085 FSD2A1L4K1 749 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 CYP19A1P11511 503 aaPredicted RBP17.24■□□□□ 0.35
TIMP3-201ENST00000266085 SMTNP53814 917 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 DIXDC1Q155Q3 683 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 MAEAQ7L5Y9 396 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 CABP7Q86V35 215 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 GPKOWQ92917 476 aaPredicted RBP eCLIP17.24■□□□□ 0.35
TIMP3-201ENST00000266085 BSDC1Q9NW68 430 aaPredicted RBP17.24■□□□□ 0.35
TIMP3-201ENST00000266085 NARFQ9UHQ1 456 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 ARHGEF40Q8TER5 1519 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 IRX3P78415 501 aaPredicted RBP17.24■□□□□ 0.35
TIMP3-201ENST00000266085 GRAPQ13588 217 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 TRIM14Q14142 442 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 SMC1AQ14683 1233 aaKnown RBP17.24■□□□□ 0.35
TIMP3-201ENST00000266085 GPR162Q16538 588 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 RGS22Q8NE09 1264 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 GRAPLQ8TC17 118 aaPredicted RBP17.24■□□□□ 0.35
TIMP3-201ENST00000266085 CLRN2A0PK11 232 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 INF2Q27J81 1249 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 EAPPQ56P03 285 aaPredicted RBP17.24■□□□□ 0.35
TIMP3-201ENST00000266085 STK24Q9Y6E0 443 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 DKC1O60832 514 aaKnown RBP eCLIP17.24■□□□□ 0.355e-15■■■■■ 30.8
TIMP3-201ENST00000266085 CCDC122Q5T0U0 273 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 CHAMP1Q96JM3 812 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 PSTPIP2Q9H939 334 aa17.24■□□□□ 0.35
TIMP3-201ENST00000266085 SETBP1Q9Y6X0 1596 aa17.23■□□□□ 0.35
TIMP3-201ENST00000266085 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
TIMP3-201ENST00000266085 TUBB4BP68371 445 aa17.23■□□□□ 0.35
TIMP3-201ENST00000266085 SLFN13Q68D06 897 aa17.23■□□□□ 0.35
TIMP3-201ENST00000266085 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.23■□□□□ 0.359e-8■□□□□ 11.3
TIMP3-201ENST00000266085 CSADQ9Y600 493 aa17.23■□□□□ 0.35
TIMP3-201ENST00000266085 V9GYY5 206 aaPredicted RBP17.23■□□□□ 0.35
TIMP3-201ENST00000266085 GOLGA1Q92805 767 aa17.23■□□□□ 0.35
TIMP3-201ENST00000266085 PIH1D3Q9NQM4 214 aaKnown RBP17.23■□□□□ 0.35
TIMP3-201ENST00000266085 PPRC1Q5VV67 1664 aaKnown RBP17.23■□□□□ 0.35
TIMP3-201ENST00000266085 MCM6Q14566 821 aa17.23■□□□□ 0.35
TIMP3-201ENST00000266085 BBXQ8WY36 941 aaPredicted RBP17.23■□□□□ 0.35
TIMP3-201ENST00000266085 NOP56O00567 594 aaKnown RBP17.22■□□□□ 0.35
TIMP3-201ENST00000266085 DDAH1O94760 285 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 ZNF75DP51815 510 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 DCAF15Q66K64 600 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 CCDC17Q96LX7 622 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 SERTAD1Q9UHV2 236 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 MED14O60244 1454 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 CEP83Q9Y592 693 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 NBPF26B4DH59 902 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 DPY19L2Q6NUT2 758 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms