RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 PLA2G4DQ86XP0 818 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 UBL4BQ8N7F7 174 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 ABCB6Q9NP58 842 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 KDM5CP41229 1560 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 FBLN1P23142 703 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 RTN1Q16799 776 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 SLF1Q9BQI6 1058 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 SAMM50Q9Y512 469 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 CALML3P27482 149 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 DEUP1Q05D60 604 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 WTAPQ15007 396 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 KRT24Q2M2I5 525 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.85□□□□□ -0.51
CPT1A-201ENST00000265641 MRFAP1Q9Y605 127 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 ABCC4O15439 1325 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 PDE1CQ14123 709 aaPredicted RBP11.85□□□□□ -0.51
CPT1A-201ENST00000265641 POSTNQ15063 836 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 ESCO1Q5FWF5 840 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 PPP1R21Q6ZMI0 780 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 LZICQ8WZA0 190 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 PANX2Q96RD6 677 aa11.85□□□□□ -0.51
CPT1A-201ENST00000265641 CALM1P0DP23 149 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 CALM2P0DP24 149 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 CALM3P0DP25 149 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 SDCCAG8Q86SQ7 713 aaPredicted RBP11.84□□□□□ -0.51
CPT1A-201ENST00000265641 PDCD7Q8N8D1 485 aaKnown RBP11.84□□□□□ -0.51
CPT1A-201ENST00000265641 PALD1Q9ULE6 856 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 NUTM2BA6NNL0 878 aaPredicted RBP11.84□□□□□ -0.51
CPT1A-201ENST00000265641 NUTM2EB1AL46 878 aaPredicted RBP11.84□□□□□ -0.51
CPT1A-201ENST00000265641 NNTQ13423 1086 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 BIRC3Q13489 604 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 YIPF3Q9GZM5 350 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 RTL9Q8NET4 1388 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 POGZQ7Z3K3 1410 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 TRIM37O94972 964 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 NBPF20Q3BBV1 942 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 KCNH5Q8NCM2 988 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 KLHDC4Q8TBB5 520 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 CHPF2Q9P2E5 772 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 PA2G4Q9UQ80 394 aaKnown RBP11.84□□□□□ -0.51
CPT1A-201ENST00000265641 TXNDC9O14530 226 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 MEFVO15553 781 aaPredicted RBP11.84□□□□□ -0.51
CPT1A-201ENST00000265641 CMA1P23946 247 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 PSMC4P43686 418 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 USP37Q86T82 979 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 DDX23Q9BUQ8 820 aaKnown RBP11.84□□□□□ -0.51
CPT1A-201ENST00000265641 NOC4LQ9BVI4 516 aaKnown RBP11.84□□□□□ -0.51
CPT1A-201ENST00000265641 SCINQ9Y6U3 715 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 UNC13BO14795 1591 aa11.84□□□□□ -0.51
CPT1A-201ENST00000265641 I3L4J1 428 aa11.83□□□□□ -0.51
CPT1A-201ENST00000265641 TPD52P55327 224 aaPredicted RBP11.83□□□□□ -0.51
CPT1A-201ENST00000265641 ME3Q16798 604 aa11.83□□□□□ -0.51
CPT1A-201ENST00000265641 TCERG1LQ5VWI1 586 aa11.83□□□□□ -0.51
CPT1A-201ENST00000265641 ITGB1BP2Q9UKP3 347 aa11.83□□□□□ -0.51
CPT1A-201ENST00000265641 CTNND2Q9UQB3 1225 aa11.83□□□□□ -0.51
CPT1A-201ENST00000265641 ATP10AO60312 1499 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 STXBP3O00186 592 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 ANXA1P04083 346 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 SLC8A3P57103 927 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 KSR2Q6VAB6 950 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 MPRIPQ6WCQ1 1025 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 STOML1Q9UBI4 398 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 TTC37Q6PGP7 1564 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 SHROOM2Q13796 1616 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 ZCCHC11Q5TAX3 1644 aaKnown RBP11.83□□□□□ -0.52
CPT1A-201ENST00000265641 IQGAP3Q86VI3 1631 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 CHGBP05060 677 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 CCT6AP40227 531 aaKnown RBP11.83□□□□□ -0.52
CPT1A-201ENST00000265641 HOOK2Q96ED9 719 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 STAMBPL1Q96FJ0 436 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 BPIFA3Q9BQP9 254 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 SPZ1Q9BXG8 430 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 HELLSQ9NRZ9 838 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 INTS9Q9NV88 658 aaKnown RBP11.83□□□□□ -0.52
CPT1A-201ENST00000265641 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 EIF2AQ9BY44 585 aaKnown RBP11.83□□□□□ -0.52
CPT1A-201ENST00000265641 IFIH1Q9BYX4 1025 aaKnown RBP11.83□□□□□ -0.52
CPT1A-201ENST00000265641 NEO1Q92859 1461 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 TARSL2A2RTX5 802 aaKnown RBP11.83□□□□□ -0.52
CPT1A-201ENST00000265641 ERCC5P28715 1186 aaPredicted RBP11.83□□□□□ -0.52
CPT1A-201ENST00000265641 KRT2P35908 639 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 PLCD1P51178 756 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 ASIC1P78348 528 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 CHST3Q7LGC8 479 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 ANKRD27Q96NW4 1050 aa11.83□□□□□ -0.52
CPT1A-201ENST00000265641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.83□□□□□ -0.52
CPT1A-201ENST00000265641 CFAP157Q5JU67 520 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 SYNCQ9H7C4 482 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 PAG1Q9NWQ8 432 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 TRPM2O94759 1503 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 GNAQP50148 359 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
CPT1A-201ENST00000265641 CCDC25Q86WR0 208 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 ABTB1Q969K4 478 aaPredicted RBP11.82□□□□□ -0.52
CPT1A-201ENST00000265641 UBA5Q9GZZ9 404 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 IGHMBP2P38935 993 aaKnown RBP11.82□□□□□ -0.52
CPT1A-201ENST00000265641 ESRRGP62508 458 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 ATP2B2Q01814 1243 aa11.82□□□□□ -0.52
CPT1A-201ENST00000265641 VSTM4Q8IW00 320 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms