RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SLC1A4P43007 532 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 SYKP43405 635 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 RILPL1Q5EBL4 403 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 NOSTRINQ8IVI9 506 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 CNNM3Q8NE01 707 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 GDF11O95390 407 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 TOP1P11387 765 aaKnown RBP10.69□□□□□ -0.7
SSR3-201ENST00000265044 MCM7P33993 719 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 KIF23Q02241 960 aaPredicted RBP10.69□□□□□ -0.7
SSR3-201ENST00000265044 CDC42EP5Q6NZY7 148 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 GAS2L3Q86XJ1 694 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 ZNF384Q8TF68 577 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 TRIM5Q9C035 493 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 NAT10Q9H0A0 1025 aaKnown RBP10.69□□□□□ -0.7
SSR3-201ENST00000265044 ANAPC4Q9UJX5 808 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 SALL1Q9NSC2 1324 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 UBE2Q2LH0YL09 131 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 GUCY1A2P33402 732 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 TPD52L1Q16890 204 aaPredicted RBP10.69□□□□□ -0.7
SSR3-201ENST00000265044 CEP95Q96GE4 821 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 TMEM47Q9BQJ4 181 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.69□□□□□ -0.7
SSR3-201ENST00000265044 PI4KBQ9UBF8 816 aa10.69□□□□□ -0.7
SSR3-201ENST00000265044 SCG2P13521 617 aa10.68□□□□□ -0.7
SSR3-201ENST00000265044 PPP4R3BQ5MIZ7 849 aa10.68□□□□□ -0.7
SSR3-201ENST00000265044 CIAPIN1Q6FI81 312 aa10.68□□□□□ -0.7
SSR3-201ENST00000265044 C15orf52Q6ZUT6 534 aaKnown RBP10.68□□□□□ -0.7
SSR3-201ENST00000265044 NR1I2O75469 434 aa10.68□□□□□ -0.7
SSR3-201ENST00000265044 TNNI2P48788 182 aa10.68□□□□□ -0.7
SSR3-201ENST00000265044 KIAA2012Q0VF49 1180 aa10.68□□□□□ -0.7
SSR3-201ENST00000265044 NFIAQ12857 509 aa10.68□□□□□ -0.7
SSR3-201ENST00000265044 MTA3Q9BTC8 594 aa10.68□□□□□ -0.7
SSR3-201ENST00000265044 C6orf50Q9HD87 102 aa10.68□□□□□ -0.7
SSR3-201ENST00000265044 TAF1P21675 1872 aa10.68□□□□□ -0.7
SSR3-201ENST00000265044 CLEC10AQ8IUN9 316 aa10.68□□□□□ -0.7
SSR3-201ENST00000265044 DHX36Q9H2U1 1008 aaKnown RBP10.68□□□□□ -0.7
SSR3-201ENST00000265044 FAM205AQ6ZU69 1335 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 CTAGE5O15320 804 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 MIGA2Q7L4E1 593 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 CERS5Q8N5B7 392 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 ERCC4Q92889 916 aaPredicted RBP10.67□□□□□ -0.7
SSR3-201ENST00000265044 SWAP70Q9UH65 585 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 USP25Q9UHP3 1055 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 PCDHA7Q9UN72 937 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 CDK11BP21127 795 aaKnown RBP10.67□□□□□ -0.7
SSR3-201ENST00000265044 GNA11P29992 359 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 ICA1Q05084 483 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 HHIPL2Q6UWX4 724 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 CEP57L1Q8IYX8 460 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 CDK5RAP3Q96JB5 506 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 MTFR1LQ9H019 292 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 PSMD14O00487 310 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 IGSF3O75054 1194 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 TTLL1O95922 423 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 RASA1P20936 1047 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 ZNF165P49910 485 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 FAM160A1Q05DH4 1040 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 DHX8Q14562 1220 aaKnown RBP10.67□□□□□ -0.7
SSR3-201ENST00000265044 TNIP1Q15025 636 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 ABCB5Q2M3G0 1257 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 TMTC3Q6ZXV5 915 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 KRI1Q8N9T8 703 aaKnown RBP10.67□□□□□ -0.7
SSR3-201ENST00000265044 SPC24Q8NBT2 197 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 CCDC17Q96LX7 622 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.67□□□□□ -0.7
SSR3-201ENST00000265044 OSBPL5Q9H0X9 879 aaPredicted RBP10.67□□□□□ -0.7
SSR3-201ENST00000265044 RBSNQ9H1K0 784 aa10.67□□□□□ -0.7
SSR3-201ENST00000265044 SCAF8Q9UPN6 1271 aaKnown RBP10.67□□□□□ -0.7
SSR3-201ENST00000265044 YEATS4O95619 227 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 MMP1P03956 469 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 AKR1B1P15121 316 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 JAKMIP3Q5VZ66 844 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 CCDC125Q86Z20 511 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 STAG2Q8N3U4 1231 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 VWA3AA6NCI4 1184 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 PES1O00541 588 aaKnown RBP10.66□□□□□ -0.7
SSR3-201ENST00000265044 SLC16A2P36021 539 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 ZNF445P59923 1031 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 CCDC173Q0VFZ6 552 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 PRKG1Q13976 671 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 LETM2Q2VYF4 491 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 GRIPAP1Q4V328 841 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 KCTD1Q719H9 257 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 SPICE1Q8N0Z3 855 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 ZNRF3Q9ULT6 936 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 EP400Q96L91 3159 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 H7C1D1 291 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 PRPF3O43395 683 aaKnown RBP10.66□□□□□ -0.7
SSR3-201ENST00000265044 ZNF76P36508 570 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 EVCP57679 992 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 ANO6Q4KMQ2 910 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 NEDD1Q8NHV4 660 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 RASGRP4Q8TDF6 673 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 CLIC6Q96NY7 704 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 LZTS2Q9BRK4 669 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 ANO10Q9NW15 660 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 RCOR1Q9UKL0 485 aa10.66□□□□□ -0.7
SSR3-201ENST00000265044 KLRG2A4D1S0 409 aaPredicted RBP10.65□□□□□ -0.7
SSR3-201ENST00000265044 UBA7P41226 1012 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 TYRO3Q06418 890 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms