RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 RCSD1Q6JBY9 416 aa11.44□□□□□ -0.58
SNRNP40-201ENST00000263694 NFXL1Q6ZNB6 911 aa11.44□□□□□ -0.58
SNRNP40-201ENST00000263694 KRT26Q7Z3Y9 468 aa11.44□□□□□ -0.58
SNRNP40-201ENST00000263694 IQCA1Q86XH1 822 aa11.44□□□□□ -0.58
SNRNP40-201ENST00000263694 NEDD1Q8NHV4 660 aa11.44□□□□□ -0.58
SNRNP40-201ENST00000263694 ERICH2A1L162 156 aa11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 PPFIA3O75145 1194 aa11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 VEGFAP15692 232 aaPredicted RBP11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 PDIA3P30101 505 aaKnown RBP11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 MCM2P49736 904 aa11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 FMR1Q06787 632 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 SART3Q15020 963 aaKnown RBP11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 ANKRD1Q15327 319 aa11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 MAP1SQ66K74 1059 aaPredicted RBP11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 CCDC83Q8IWF9 413 aa11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 SULF1Q8IWU6 871 aa11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 CCDC144CPQ8IYA2 1237 aa11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 FBXL16Q8N461 479 aa11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 CEP95Q96GE4 821 aa11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 DCBLD2Q96PD2 775 aa11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 GLIS2Q9BZE0 524 aaPredicted RBP11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 NCOA5Q9HCD5 579 aaKnown RBP11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 HERC5Q9UII4 1024 aaKnown RBP11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 HPS5Q9UPZ3 1129 aa11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 PITPNM2Q9BZ72 1349 aa11.43□□□□□ -0.58
SNRNP40-201ENST00000263694 CCDC69A6NI79 296 aa11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 TBC1D12O60347 775 aa11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 GH2P01242 217 aa11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 GUCY1A2P33402 732 aa11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 LIFRP42702 1097 aa11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 MAP3K10Q02779 954 aa11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 SEPT2Q15019 361 aa11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 ABCB5Q2M3G0 1257 aa11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 IFIT1BQ5T764 474 aaKnown RBP11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 CCDC84Q86UT8 332 aaPredicted RBP11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 PNMA8AQ86V59 439 aaPredicted RBP11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 DAXXQ9UER7 740 aaPredicted RBP11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 STX8Q9UNK0 236 aa11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 MTMR7Q9Y216 660 aa11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 GREB1LQ9C091 1923 aaPredicted RBP11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 SSC5DA1L4H1 1573 aa11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 MYH4Q9Y623 1939 aa11.42□□□□□ -0.58
SNRNP40-201ENST00000263694 IGKV6D-41A0A0C4DH26 115 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 GOLGA8BA8MQT2 603 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 PHF20L1A8MW92 1017 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 ATP2B2Q01814 1243 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 SCRN1Q12765 414 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 RAB3GAP1Q15042 981 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 APOA5Q6Q788 366 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 RASGRP2Q7LDG7 609 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 MICU3Q86XE3 530 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 ZC3H15Q8WU90 426 aaKnown RBP11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 ZSCAN31Q96LW9 406 aaPredicted RBP11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 CCDC17Q96LX7 622 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 TMEM47Q9BQJ4 181 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 SLKQ9H2G2 1235 aaPredicted RBP11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 TCP11L1Q9NUJ3 509 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 MTMR4Q9NYA4 1195 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 CLIP2Q9UDT6 1046 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 ATAD5Q96QE3 1844 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 TRAF5O00463 557 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 PFKFB2O60825 505 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 INPP5BP32019 993 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 EVCP57679 992 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 SGMS1Q86VZ5 419 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 SIAH1Q8IUQ4 282 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 ZNF654Q8IZM8 581 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 NUP133Q8WUM0 1156 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 CDCA5Q96FF9 252 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 ZNF274Q96GC6 653 aaPredicted RBP11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 MTA3Q9BTC8 594 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 SLC12A7Q9Y666 1083 aa11.41□□□□□ -0.58
SNRNP40-201ENST00000263694 PLIN4Q96Q06 1357 aa11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 ZBTB43O43298 467 aa11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 HSP90AA1P07900 732 aaKnown RBP11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 EEF2P13639 858 aaKnown RBP11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 CDC27P30260 824 aa11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 ADD1P35611 737 aaKnown RBP11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 CAP2P40123 477 aa11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 CUL4AQ13619 759 aa11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 MOB2Q70IA6 237 aa11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 DGKHQ86XP1 1220 aa11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 LRRC47Q8N1G4 583 aaKnown RBP11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 IL27Q8NEV9 243 aa11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 ANKS1AQ92625 1134 aa11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 GTF3C6Q969F1 213 aa11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 ZKSCAN4Q969J2 545 aaPredicted RBP11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 SH2B1Q9NRF2 756 aaPredicted RBP11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 FAM217BQ9NTX9 383 aaPredicted RBP11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 PPP2R3BQ9Y5P8 575 aa11.4□□□□□ -0.58
SNRNP40-201ENST00000263694 BAZ2BQ9UIF8 2168 aaKnown RBP11.39□□□□□ -0.59
SNRNP40-201ENST00000263694 GOLGA8AA7E2F4 631 aa11.39□□□□□ -0.59
SNRNP40-201ENST00000263694 USP2O75604 605 aaPredicted RBP11.39□□□□□ -0.59
SNRNP40-201ENST00000263694 METAP2P50579 478 aaKnown RBP eCLIP11.39□□□□□ -0.59
SNRNP40-201ENST00000263694 SUPT20HL1Q3ZLR7 823 aa11.39□□□□□ -0.59
SNRNP40-201ENST00000263694 DCAF15Q66K64 600 aa11.39□□□□□ -0.59
SNRNP40-201ENST00000263694 TMEM179Q6ZVK1 233 aa11.39□□□□□ -0.59
SNRNP40-201ENST00000263694 CMTR1Q8N1G2 835 aaKnown RBP11.39□□□□□ -0.59
SNRNP40-201ENST00000263694 TMTC2Q8N394 836 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms