RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 PNMA1Q8ND90 353 aa18.3■□□□□ 0.52
VPS26A-201ENST00000263559 POLR3EQ9NVU0 708 aa18.3■□□□□ 0.52
VPS26A-201ENST00000263559 YDJCA8MPS7 323 aa18.3■□□□□ 0.52
VPS26A-201ENST00000263559 BAZ2BQ9UIF8 2168 aaKnown RBP18.3■□□□□ 0.52
VPS26A-201ENST00000263559 RTKN2Q8IZC4 609 aa18.29■□□□□ 0.52
VPS26A-201ENST00000263559 NEDD1Q8NHV4 660 aa18.29■□□□□ 0.52
VPS26A-201ENST00000263559 DACT1Q9NYF0 836 aa18.29■□□□□ 0.52
VPS26A-201ENST00000263559 BTBD18B2RXH4 712 aa18.29■□□□□ 0.52
VPS26A-201ENST00000263559 NASPP49321 788 aaPredicted RBP18.29■□□□□ 0.52
VPS26A-201ENST00000263559 GRIPAP1Q4V328 841 aa18.29■□□□□ 0.52
VPS26A-201ENST00000263559 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
VPS26A-201ENST00000263559 STX8Q9UNK0 236 aa18.29■□□□□ 0.52
VPS26A-201ENST00000263559 ME1P48163 572 aa18.28■□□□□ 0.52
VPS26A-201ENST00000263559 RBM5P52756 815 aaKnown RBP eCLIP18.28■□□□□ 0.52
VPS26A-201ENST00000263559 HDLBPQ00341 1268 aaKnown RBP18.28■□□□□ 0.52
VPS26A-201ENST00000263559 GABPAQ06546 454 aa18.28■□□□□ 0.52
VPS26A-201ENST00000263559 NFIAQ12857 509 aa18.28■□□□□ 0.52
VPS26A-201ENST00000263559 STK38Q15208 465 aa18.28■□□□□ 0.52
VPS26A-201ENST00000263559 SHISA4Q96DD7 197 aa18.28■□□□□ 0.52
VPS26A-201ENST00000263559 TMEM47Q9BQJ4 181 aa18.28■□□□□ 0.52
VPS26A-201ENST00000263559 TSPY26PQ9H489 355 aa18.28■□□□□ 0.52
VPS26A-201ENST00000263559 ATF5Q9Y2D1 282 aaPredicted RBP18.28■□□□□ 0.52
VPS26A-201ENST00000263559 CNTNAP5Q8WYK1 1306 aa18.28■□□□□ 0.52
VPS26A-201ENST00000263559 NR1I2O75469 434 aa18.28■□□□□ 0.52
VPS26A-201ENST00000263559 SAFBQ15424 915 aaKnown RBP eCLIP18.28■□□□□ 0.52
VPS26A-201ENST00000263559 ANO1Q5XXA6 986 aa18.28■□□□□ 0.52
VPS26A-201ENST00000263559 DIS3L2Q8IYB7 885 aaKnown RBP18.28■□□□□ 0.52
VPS26A-201ENST00000263559 PCDHA7Q9UN72 937 aa18.28■□□□□ 0.52
VPS26A-201ENST00000263559 MYH8P13535 1937 aa18.28■□□□□ 0.52
VPS26A-201ENST00000263559 YEATS4O95619 227 aa18.27■□□□□ 0.52
VPS26A-201ENST00000263559 PSMD1Q99460 953 aa18.27■□□□□ 0.52
VPS26A-201ENST00000263559 MAP3K14Q99558 947 aa18.27■□□□□ 0.52
VPS26A-201ENST00000263559 KIF5BP33176 963 aa18.27■□□□□ 0.52
VPS26A-201ENST00000263559 CCAR1Q8IX12 1150 aaKnown RBP18.27■□□□□ 0.52
VPS26A-201ENST00000263559 VPS54Q9P1Q0 977 aa18.27■□□□□ 0.52
VPS26A-201ENST00000263559 CAMK4Q16566 473 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 NOSTRINQ8IVI9 506 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 ZFPM1Q8IX07 1006 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 NUP62CLQ9H1M0 184 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 SERPINA10Q9UK55 444 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 PSME4Q14997 1843 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 SPTLC2O15270 562 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 CACNB3P54284 484 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 STAG2Q8N3U4 1231 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 KCNG4Q8TDN1 519 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 FOXP1Q9H334 677 aaPredicted RBP18.26■□□□□ 0.51
VPS26A-201ENST00000263559 ZNF277Q9NRM2 450 aaPredicted RBP18.26■□□□□ 0.51
VPS26A-201ENST00000263559 DDX19AQ9NUU7 478 aaKnown RBP18.26■□□□□ 0.51
VPS26A-201ENST00000263559 GRM4Q14833 912 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 SF3A1Q15459 793 aaKnown RBP18.26■□□□□ 0.51
VPS26A-201ENST00000263559 OXER1Q8TDS5 423 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 CEP95Q96GE4 821 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 GOLPH3LQ9H4A5 285 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 MAD2L2Q9UI95 211 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 SERPINB13Q9UIV8 391 aa18.26■□□□□ 0.51
VPS26A-201ENST00000263559 XBP1P17861 261 aa18.25■□□□□ 0.51
VPS26A-201ENST00000263559 NR5A1Q13285 461 aa18.25■□□□□ 0.51
VPS26A-201ENST00000263559 ADALQ6DHV7 355 aa18.25■□□□□ 0.51
VPS26A-201ENST00000263559 MTMR7Q9Y216 660 aa18.25■□□□□ 0.51
VPS26A-201ENST00000263559 SLC39A14Q15043 492 aa18.25■□□□□ 0.51
VPS26A-201ENST00000263559 LARGE2Q8N3Y3 721 aa18.25■□□□□ 0.51
VPS26A-201ENST00000263559 PHF20Q9BVI0 1012 aa18.25■□□□□ 0.51
VPS26A-201ENST00000263559 TGFB2P61812 414 aa18.24■□□□□ 0.51
VPS26A-201ENST00000263559 PIBF1Q8WXW3 757 aa18.24■□□□□ 0.51
VPS26A-201ENST00000263559 FUCA2Q9BTY2 467 aa18.24■□□□□ 0.51
VPS26A-201ENST00000263559 CLSTN2Q9H4D0 955 aa18.24■□□□□ 0.51
VPS26A-201ENST00000263559 HLA-DOAP06340 250 aa18.24■□□□□ 0.51
VPS26A-201ENST00000263559 TCP10Q12799 353 aa18.24■□□□□ 0.51
VPS26A-201ENST00000263559 RNF214Q8ND24 703 aa18.24■□□□□ 0.51
VPS26A-201ENST00000263559 IDI2Q9BXS1 227 aa18.24■□□□□ 0.51
VPS26A-201ENST00000263559 MTFR1LQ9H019 292 aa18.24■□□□□ 0.51
VPS26A-201ENST00000263559 TNMDQ9H2S6 317 aa18.24■□□□□ 0.51
VPS26A-201ENST00000263559 PIM2Q9P1W9 311 aa18.24■□□□□ 0.51
VPS26A-201ENST00000263559 SWAP70Q9UH65 585 aa18.24■□□□□ 0.51
VPS26A-201ENST00000263559 COL4A5P29400 1685 aa18.23■□□□□ 0.51
VPS26A-201ENST00000263559 AKR1B1P15121 316 aa18.23■□□□□ 0.51
VPS26A-201ENST00000263559 VEGFAP15692 232 aaPredicted RBP18.23■□□□□ 0.51
VPS26A-201ENST00000263559 NOVP48745 357 aa18.23■□□□□ 0.51
VPS26A-201ENST00000263559 FAM198AQ9UFP1 575 aa18.23■□□□□ 0.51
VPS26A-201ENST00000263559 RAD17O75943 681 aa18.23■□□□□ 0.51
VPS26A-201ENST00000263559 SLURP2P0DP57 97 aa18.23■□□□□ 0.51
VPS26A-201ENST00000263559 SCG2P13521 617 aa18.23■□□□□ 0.51
VPS26A-201ENST00000263559 POLD1P28340 1107 aa18.23■□□□□ 0.51
VPS26A-201ENST00000263559 SHMT1P34896 483 aa18.23■□□□□ 0.51
VPS26A-201ENST00000263559 TOB1P50616 345 aaPredicted RBP18.23■□□□□ 0.51
VPS26A-201ENST00000263559 SNW1Q13573 536 aaKnown RBP18.23■□□□□ 0.51
VPS26A-201ENST00000263559 PTPAQ15257 358 aa18.23■□□□□ 0.51
VPS26A-201ENST00000263559 MAP3K11Q16584 847 aa18.23■□□□□ 0.51
VPS26A-201ENST00000263559 FSIP1Q8NA03 581 aa18.23■□□□□ 0.51
VPS26A-201ENST00000263559 PLIN4Q96Q06 1357 aa18.22■□□□□ 0.51
VPS26A-201ENST00000263559 A0A1W2PQ27 194 aa18.22■□□□□ 0.51
VPS26A-201ENST00000263559 A0A1W2PQ64 194 aa18.22■□□□□ 0.51
VPS26A-201ENST00000263559 A0A1W2PQD8 194 aa18.22■□□□□ 0.51
VPS26A-201ENST00000263559 PALM3A6NDB9 673 aaPredicted RBP18.22■□□□□ 0.51
VPS26A-201ENST00000263559 TOP1P11387 765 aaKnown RBP18.22■□□□□ 0.51
VPS26A-201ENST00000263559 MARCKSP29966 332 aaPredicted RBP18.22■□□□□ 0.51
VPS26A-201ENST00000263559 PFKFB3Q16875 520 aaPredicted RBP18.22■□□□□ 0.51
VPS26A-201ENST00000263559 CFAP100Q494V2 611 aa18.22■□□□□ 0.51
VPS26A-201ENST00000263559 CCDC73Q6ZRK6 1079 aa18.22■□□□□ 0.51
VPS26A-201ENST00000263559 KLHL34Q8N239 644 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms