RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 U2AF1L4Q8WU68 220 aaKnown RBP11.34□□□□□ -0.59
TTC39A-201ENST00000262675 PDLIM2Q96JY6 352 aa11.34□□□□□ -0.59
TTC39A-201ENST00000262675 ABCF2Q9UG63 623 aa11.34□□□□□ -0.59
TTC39A-201ENST00000262675 CYP2C8P10632 490 aa11.34□□□□□ -0.59
TTC39A-201ENST00000262675 PSMA5P28066 241 aa11.34□□□□□ -0.59
TTC39A-201ENST00000262675 RASGRF1Q13972 1273 aa11.34□□□□□ -0.59
TTC39A-201ENST00000262675 FAM110CQ1W6H9 321 aa11.34□□□□□ -0.59
TTC39A-201ENST00000262675 ANKLE1Q8NAG6 615 aa11.34□□□□□ -0.59
TTC39A-201ENST00000262675 NOL10Q9BSC4 688 aaKnown RBP11.34□□□□□ -0.59
TTC39A-201ENST00000262675 UPF3BQ9BZI7 483 aaKnown RBP11.34□□□□□ -0.59
TTC39A-201ENST00000262675 AS3MTQ9HBK9 375 aa11.34□□□□□ -0.59
TTC39A-201ENST00000262675 GINM1Q9NU53 330 aa11.34□□□□□ -0.59
TTC39A-201ENST00000262675 HTTP42858 3142 aa11.34□□□□□ -0.59
TTC39A-201ENST00000262675 LOC285556D6RIA3 1793 aa11.34□□□□□ -0.59
TTC39A-201ENST00000262675 A0A1B0GUL7 405 aa11.33□□□□□ -0.6
TTC39A-201ENST00000262675 MCM5P33992 734 aa11.33□□□□□ -0.6
TTC39A-201ENST00000262675 CWC27Q6UX04 472 aaKnown RBP11.33□□□□□ -0.6
TTC39A-201ENST00000262675 ZFPM1Q8IX07 1006 aa11.33□□□□□ -0.6
TTC39A-201ENST00000262675 FAM184AQ8NB25 1140 aa11.33□□□□□ -0.6
TTC39A-201ENST00000262675 HERC5Q9UII4 1024 aaKnown RBP11.33□□□□□ -0.6
TTC39A-201ENST00000262675 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
TTC39A-201ENST00000262675 PLCG2P16885 1265 aa11.33□□□□□ -0.6
TTC39A-201ENST00000262675 FLT3LGP49771 235 aa11.33□□□□□ -0.6
TTC39A-201ENST00000262675 GORABQ5T7V8 394 aa11.33□□□□□ -0.6
TTC39A-201ENST00000262675 RNF20Q5VTR2 975 aa11.33□□□□□ -0.6
TTC39A-201ENST00000262675 CHRDL2Q6WN34 429 aa11.33□□□□□ -0.6
TTC39A-201ENST00000262675 XAGE2Q96GT9 111 aa11.33□□□□□ -0.6
TTC39A-201ENST00000262675 ALDH8A1Q9H2A2 487 aaPredicted RBP11.33□□□□□ -0.6
TTC39A-201ENST00000262675 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.33□□□□□ -0.6
TTC39A-201ENST00000262675 ZSWIM6Q9HCJ5 1215 aa11.33□□□□□ -0.6
TTC39A-201ENST00000262675 ATAD5Q96QE3 1844 aa11.32□□□□□ -0.6
TTC39A-201ENST00000262675 DDTLA6NHG4 134 aaPredicted RBP11.32□□□□□ -0.6
TTC39A-201ENST00000262675 INHAP05111 366 aa11.32□□□□□ -0.6
TTC39A-201ENST00000262675 ADORA1P30542 326 aa11.32□□□□□ -0.6
TTC39A-201ENST00000262675 AK2P54819 239 aa11.32□□□□□ -0.6
TTC39A-201ENST00000262675 ANKRD1Q15327 319 aa11.32□□□□□ -0.6
TTC39A-201ENST00000262675 SH3BP5LQ7L8J4 393 aa11.32□□□□□ -0.6
TTC39A-201ENST00000262675 AACSQ86V21 672 aa11.32□□□□□ -0.6
TTC39A-201ENST00000262675 IL25Q9H293 177 aa11.32□□□□□ -0.6
TTC39A-201ENST00000262675 DHX36Q9H2U1 1008 aaKnown RBP11.32□□□□□ -0.6
TTC39A-201ENST00000262675 TMEM63CQ9P1W3 806 aa11.32□□□□□ -0.6
TTC39A-201ENST00000262675 CYP46A1Q9Y6A2 500 aa11.32□□□□□ -0.6
TTC39A-201ENST00000262675 TRIM75PA6NK02 468 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 TFRCP02786 760 aaKnown RBP11.31□□□□□ -0.6
TTC39A-201ENST00000262675 ZSCAN22P10073 491 aaPredicted RBP11.31□□□□□ -0.6
TTC39A-201ENST00000262675 MECOMQ03112 1051 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 PICALMQ13492 652 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 ZNF280CQ8ND82 737 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 GTF3C2Q8WUA4 911 aaPredicted RBP11.31□□□□□ -0.6
TTC39A-201ENST00000262675 UNC93B1Q9H1C4 597 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 PAK6Q9NQU5 681 aaPredicted RBP11.31□□□□□ -0.6
TTC39A-201ENST00000262675 HMG20BQ9P0W2 317 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 GABRQQ9UN88 632 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 PA2G4Q9UQ80 394 aaKnown RBP11.31□□□□□ -0.6
TTC39A-201ENST00000262675 SMC3Q9UQE7 1217 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 CCDC171Q6TFL3 1326 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 USP17L5A8MUK1 530 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 STX6O43752 255 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 EVI5O60447 810 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 BAG3O95817 575 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 MSNP26038 577 aaKnown RBP11.31□□□□□ -0.6
TTC39A-201ENST00000262675 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
TTC39A-201ENST00000262675 RHBDL3P58872 404 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 TIMM10P62072 90 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 NECTIN1Q15223 517 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 UVSSAQ2YD98 709 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 TRMT44Q8IYL2 757 aaKnown RBP11.31□□□□□ -0.6
TTC39A-201ENST00000262675 SPATA5Q8NB90 893 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 MAP4K1Q92918 833 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 CRISPLD2Q9H0B8 497 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 RBSNQ9H1K0 784 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 DDX4Q9NQI0 724 aaKnown RBP11.31□□□□□ -0.6
TTC39A-201ENST00000262675 MAST2Q6P0Q8 1798 aa11.31□□□□□ -0.6
TTC39A-201ENST00000262675 HMGCRP04035 888 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
TTC39A-201ENST00000262675 TFCP2Q12800 502 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 CERS3Q8IU89 383 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 PDRG1Q9NUG6 133 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 RBM27Q9P2N5 1060 aaKnown RBP11.3□□□□□ -0.6
TTC39A-201ENST00000262675 CAP2P40123 477 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 TSGA10IPQ3SY00 556 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 TMED8Q6PL24 325 aaPredicted RBP11.3□□□□□ -0.6
TTC39A-201ENST00000262675 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 NECAB2Q7Z6G3 386 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 ANKRD13CQ8N6S4 541 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 NSUN4Q96CB9 384 aaKnown RBP11.3□□□□□ -0.6
TTC39A-201ENST00000262675 NEUROD6Q96NK8 337 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 PRO3102Q9H379 93 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 TSPY26PQ9H489 355 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 PI4KBQ9UBF8 816 aa11.3□□□□□ -0.6
TTC39A-201ENST00000262675 SYCE3A1L190 88 aa11.29□□□□□ -0.6
TTC39A-201ENST00000262675 C19orf81C9J6K1 198 aa11.29□□□□□ -0.6
TTC39A-201ENST00000262675 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
TTC39A-201ENST00000262675 PDCP20941 246 aa11.29□□□□□ -0.6
TTC39A-201ENST00000262675 TERF1P54274 439 aa11.29□□□□□ -0.6
TTC39A-201ENST00000262675 UBE2HP62256 183 aa11.29□□□□□ -0.6
TTC39A-201ENST00000262675 UBE2Q2Q8WVN8 375 aa11.29□□□□□ -0.6
TTC39A-201ENST00000262675 WDR18Q9BV38 432 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms