RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 BTDP43251 543 aa16.07■□□□□ 0.16
SGCA-201ENST00000262018 MAP2K5Q13163 448 aa16.07■□□□□ 0.16
SGCA-201ENST00000262018 RRP1BQ14684 758 aaKnown RBP16.07■□□□□ 0.16
SGCA-201ENST00000262018 GJC2Q5T442 439 aaPredicted RBP16.07■□□□□ 0.16
SGCA-201ENST00000262018 SLC39A5Q6ZMH5 540 aa16.07■□□□□ 0.16
SGCA-201ENST00000262018 DZIP1Q86YF9 867 aaKnown RBP16.07■□□□□ 0.16
SGCA-201ENST00000262018 EDC3Q96F86 508 aaKnown RBP16.07■□□□□ 0.16
SGCA-201ENST00000262018 UHRF1Q96T88 793 aaPredicted RBP16.07■□□□□ 0.16
SGCA-201ENST00000262018 FBXO3Q9UK99 471 aa16.07■□□□□ 0.16
SGCA-201ENST00000262018 DENND2AQ9ULE3 1009 aa16.07■□□□□ 0.16
SGCA-201ENST00000262018 MUC3AQ02505 3323 aa16.07■□□□□ 0.16
SGCA-201ENST00000262018 SALL3Q9BXA9 1300 aa16.07■□□□□ 0.16
SGCA-201ENST00000262018 TRIM60Q495X7 471 aa16.06■□□□□ 0.16
SGCA-201ENST00000262018 SH3RF1Q7Z6J0 888 aa16.06■□□□□ 0.16
SGCA-201ENST00000262018 SLF2Q8IX21 1173 aa16.06■□□□□ 0.16
SGCA-201ENST00000262018 ASB2Q96Q27 587 aa16.06■□□□□ 0.16
SGCA-201ENST00000262018 OSBPL3Q9H4L5 887 aa16.06■□□□□ 0.16
SGCA-201ENST00000262018 COPRSQ9NQ92 184 aa16.06■□□□□ 0.16
SGCA-201ENST00000262018 PDLIM7Q9NR12 457 aa16.06■□□□□ 0.16
SGCA-201ENST00000262018 FLRT1Q9NZU1 646 aa16.06■□□□□ 0.16
SGCA-201ENST00000262018 NDUFB9Q9Y6M9 179 aa16.06■□□□□ 0.16
SGCA-201ENST00000262018 MYH2Q9UKX2 1941 aa16.06■□□□□ 0.16
SGCA-201ENST00000262018 TRIM43BA6NCK2 446 aa16.05■□□□□ 0.16
SGCA-201ENST00000262018 EYA2O00167 538 aa16.05■□□□□ 0.16
SGCA-201ENST00000262018 BACE1P56817 501 aa16.05■□□□□ 0.16
SGCA-201ENST00000262018 TTC22Q5TAA0 569 aa16.05■□□□□ 0.16
SGCA-201ENST00000262018 OTUD7AQ8TE49 926 aaPredicted RBP16.05■□□□□ 0.16
SGCA-201ENST00000262018 TRIM43Q96BQ3 446 aaPredicted RBP16.05■□□□□ 0.16
SGCA-201ENST00000262018 KIF1BPQ96EK5 621 aa16.05■□□□□ 0.16
SGCA-201ENST00000262018 THEGQ9P2T0 379 aa16.05■□□□□ 0.16
SGCA-201ENST00000262018 NCOR1O75376 2440 aa16.05■□□□□ 0.16
SGCA-201ENST00000262018 CIAO1O76071 339 aa16.04■□□□□ 0.16
SGCA-201ENST00000262018 MYCNP04198 464 aaPredicted RBP16.04■□□□□ 0.16
SGCA-201ENST00000262018 DNAJB2P25686 324 aa16.04■□□□□ 0.16
SGCA-201ENST00000262018 PHKA1P46020 1223 aa16.04■□□□□ 0.16
SGCA-201ENST00000262018 ATP2B2Q01814 1243 aa16.04■□□□□ 0.16
SGCA-201ENST00000262018 ZGPATQ8N5A5 531 aaKnown RBP16.04■□□□□ 0.16
SGCA-201ENST00000262018 ARRDC4Q8NCT1 418 aa16.04■□□□□ 0.16
SGCA-201ENST00000262018 IL27Q8NEV9 243 aa16.04■□□□□ 0.16
SGCA-201ENST00000262018 RHPN1Q8TCX5 695 aa16.04■□□□□ 0.16
SGCA-201ENST00000262018 WDR18Q9BV38 432 aa16.04■□□□□ 0.16
SGCA-201ENST00000262018 ABCF2Q9UG63 623 aa16.04■□□□□ 0.16
SGCA-201ENST00000262018 CDH23Q9H251 3354 aa16.04■□□□□ 0.16
SGCA-201ENST00000262018 KBTBD13C9JR72 458 aa16.03■□□□□ 0.16
SGCA-201ENST00000262018 SEMA3EO15041 775 aa16.03■□□□□ 0.16
SGCA-201ENST00000262018 GLRX3O76003 335 aaKnown RBP16.03■□□□□ 0.16
SGCA-201ENST00000262018 GSPT1P15170 499 aaKnown RBP16.03■□□□□ 0.16
SGCA-201ENST00000262018 MRPS5P82675 430 aaKnown RBP16.03■□□□□ 0.16
SGCA-201ENST00000262018 ATP2B3Q16720 1220 aa16.03■□□□□ 0.16
SGCA-201ENST00000262018 WDR78Q5VTH9 848 aa16.03■□□□□ 0.16
SGCA-201ENST00000262018 FAM163AQ96GL9 167 aaPredicted RBP16.03■□□□□ 0.16
SGCA-201ENST00000262018 GAS2L1Q99501 681 aaPredicted RBP16.03■□□□□ 0.16
SGCA-201ENST00000262018 SIL1Q9H173 461 aa16.03■□□□□ 0.16
SGCA-201ENST00000262018 ZNF576Q9H609 170 aa16.03■□□□□ 0.16
SGCA-201ENST00000262018 PA2G4Q9UQ80 394 aaKnown RBP16.03■□□□□ 0.16
SGCA-201ENST00000262018 ATAD5Q96QE3 1844 aa16.03■□□□□ 0.16
SGCA-201ENST00000262018 CYP2C19P33261 490 aa16.02■□□□□ 0.16
SGCA-201ENST00000262018 ANP32AP39687 249 aaKnown RBP16.02■□□□□ 0.16
SGCA-201ENST00000262018 IL15P40933 162 aaPredicted RBP16.02■□□□□ 0.16
SGCA-201ENST00000262018 PDE1AP54750 535 aa16.02■□□□□ 0.16
SGCA-201ENST00000262018 EPHB4P54760 987 aa16.02■□□□□ 0.16
SGCA-201ENST00000262018 RHBDL3P58872 404 aa16.02■□□□□ 0.16
SGCA-201ENST00000262018 ERC1Q8IUD2 1116 aa16.02■□□□□ 0.16
SGCA-201ENST00000262018 TRPV1Q8NER1 839 aa16.02■□□□□ 0.16
SGCA-201ENST00000262018 GTF3C2Q8WUA4 911 aaPredicted RBP16.02■□□□□ 0.16
SGCA-201ENST00000262018 MROH7-TTC4A0A0A0MT08 1334 aa16.02■□□□□ 0.16
SGCA-201ENST00000262018 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.02■□□□□ 0.15
SGCA-201ENST00000262018 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.02■□□□□ 0.15
SGCA-201ENST00000262018 SEC24BO95487 1268 aa16.02■□□□□ 0.15
SGCA-201ENST00000262018 ANO1Q5XXA6 986 aa16.02■□□□□ 0.15
SGCA-201ENST00000262018 POTEEQ6S8J3 1075 aa16.02■□□□□ 0.15
SGCA-201ENST00000262018 ATG9AQ7Z3C6 839 aa16.02■□□□□ 0.15
SGCA-201ENST00000262018 TIFAQ96CG3 184 aa16.02■□□□□ 0.15
SGCA-201ENST00000262018 C1QTNF1Q9BXJ1 281 aa16.02■□□□□ 0.15
SGCA-201ENST00000262018 BDP1A6H8Y1 2624 aa16.01■□□□□ 0.15
SGCA-201ENST00000262018 RLFQ13129 1914 aa16.01■□□□□ 0.15
SGCA-201ENST00000262018 GPR75-ASB3A0A0A6YYF3 556 aa16.01■□□□□ 0.15
SGCA-201ENST00000262018 SLC15A5A6NIM6 579 aa16.01■□□□□ 0.15
SGCA-201ENST00000262018 C19orf81C9J6K1 198 aa16.01■□□□□ 0.15
SGCA-201ENST00000262018 NPM3O75607 178 aaKnown RBP16.01■□□□□ 0.15
SGCA-201ENST00000262018 PTPREP23469 700 aa16.01■□□□□ 0.15
SGCA-201ENST00000262018 ITGB8P26012 769 aa16.01■□□□□ 0.15
SGCA-201ENST00000262018 ADCYAP1R1P41586 468 aa16.01■□□□□ 0.15
SGCA-201ENST00000262018 TLE2Q04725 743 aa16.01■□□□□ 0.15
SGCA-201ENST00000262018 SNX17Q15036 470 aa16.01■□□□□ 0.15
SGCA-201ENST00000262018 FERMT2Q96AC1 680 aa16.01■□□□□ 0.15
SGCA-201ENST00000262018 USP17L10C9JJH3 530 aa16■□□□□ 0.15
SGCA-201ENST00000262018 MX1P20591 662 aa16■□□□□ 0.15
SGCA-201ENST00000262018 CCNA1P78396 465 aa16■□□□□ 0.15
SGCA-201ENST00000262018 G3BP1Q13283 466 aaKnown RBP eCLIP16■□□□□ 0.15
SGCA-201ENST00000262018 OS9Q13438 667 aaPredicted RBP16■□□□□ 0.15
SGCA-201ENST00000262018 CCDC85BQ15834 202 aaPredicted RBP16■□□□□ 0.15
SGCA-201ENST00000262018 AKNAD1Q5T1N1 836 aa16■□□□□ 0.15
SGCA-201ENST00000262018 SPTY2D1Q68D10 685 aaPredicted RBP16■□□□□ 0.15
SGCA-201ENST00000262018 NPLOC4Q8TAT6 608 aa16■□□□□ 0.15
SGCA-201ENST00000262018 IL1RAPL2Q9NP60 686 aa16■□□□□ 0.15
SGCA-201ENST00000262018 CEP126Q9P2H0 1117 aa16■□□□□ 0.15
SGCA-201ENST00000262018 HERC5Q9UII4 1024 aaKnown RBP16■□□□□ 0.15
SGCA-201ENST00000262018 SYNGAP1Q96PV0 1343 aa16■□□□□ 0.15
SGCA-201ENST00000262018 ASNSP08243 561 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms