RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 FEZ1Q99689 392 aa20.42■□□□□ 0.86
CGREF1-201ENST00000260595 CRISPLD2Q9H0B8 497 aa20.42■□□□□ 0.86
CGREF1-201ENST00000260595 CABP5Q9NP86 173 aa20.42■□□□□ 0.86
CGREF1-201ENST00000260595 USP17L15C9J2P7 530 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 USP17L13C9JLJ4 530 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 USP17L11C9JVI0 530 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 USP17L18D6R9N7 530 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 USP17L22D6RA61 530 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 USP17L17D6RBQ6 530 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 USP17L19D6RCP7 530 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 USP17L20D6RJB6 530 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 H0YGN5 161 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 HMGCRP04035 888 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 USP14P54578 494 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 ERVK-9P63128 1117 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 ERVK-24P63145 666 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 USP17L24Q0WX57 530 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 TRIM32Q13049 653 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 SEPT2Q15019 361 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 CATSPERGQ6ZRH7 1159 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 PORCNQ9H237 461 aa20.41■□□□□ 0.86
CGREF1-201ENST00000260595 CNMDO75829 334 aa20.4■□□□□ 0.86
CGREF1-201ENST00000260595 FARP2O94887 1054 aaPredicted RBP20.4■□□□□ 0.86
CGREF1-201ENST00000260595 MBD4O95243 580 aa20.4■□□□□ 0.86
CGREF1-201ENST00000260595 CAPN2P17655 700 aa20.4■□□□□ 0.86
CGREF1-201ENST00000260595 VCAM1P19320 739 aa20.4■□□□□ 0.86
CGREF1-201ENST00000260595 UBE3CQ15386 1083 aa20.4■□□□□ 0.86
CGREF1-201ENST00000260595 USP6NLQ92738 828 aa20.4■□□□□ 0.86
CGREF1-201ENST00000260595 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.4■□□□□ 0.86
CGREF1-201ENST00000260595 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.4■□□□□ 0.86
CGREF1-201ENST00000260595 PLXNB2O15031 1838 aa20.39■□□□□ 0.86
CGREF1-201ENST00000260595 A0A1W2PRG0 241 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 TFRCP02786 760 aaKnown RBP20.39■□□□□ 0.85
CGREF1-201ENST00000260595 CYP2B6P20813 491 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 MAPK4P31152 587 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 SLC44A5Q8NCS7 719 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 TRIB2Q92519 343 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 DPF3Q92784 378 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 DYNLL2Q96FJ2 89 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 NUDT12Q9BQG2 462 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 PAGR1Q9BTK6 254 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 DCTPP1Q9H773 170 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 ATP8A2Q9NTI2 1148 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 RABGAP1Q9Y3P9 1069 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 NAV1Q8NEY1 1877 aa20.39■□□□□ 0.85
CGREF1-201ENST00000260595 RPTORQ8N122 1335 aa20.38■□□□□ 0.85
CGREF1-201ENST00000260595 SMIM22K7EJ46 135 aa20.38■□□□□ 0.85
CGREF1-201ENST00000260595 XRCC5P13010 732 aaKnown RBP20.38■□□□□ 0.85
CGREF1-201ENST00000260595 MORN1Q5T089 497 aa20.38■□□□□ 0.85
CGREF1-201ENST00000260595 LBX2Q6XYB7 198 aa20.38■□□□□ 0.85
CGREF1-201ENST00000260595 GPR142Q7Z601 462 aa20.38■□□□□ 0.85
CGREF1-201ENST00000260595 SOCS4Q8WXH5 440 aa20.38■□□□□ 0.85
CGREF1-201ENST00000260595 HTATIP2Q9BUP3 242 aa20.38■□□□□ 0.85
CGREF1-201ENST00000260595 COLQQ9Y215 455 aaPredicted RBP20.38■□□□□ 0.85
CGREF1-201ENST00000260595 MAP3K21Q5TCX8 1036 aa20.37■□□□□ 0.85
CGREF1-201ENST00000260595 RPAP3Q9H6T3 665 aaPredicted RBP20.37■□□□□ 0.85
CGREF1-201ENST00000260595 ECHDC1Q9NTX5 307 aa20.37■□□□□ 0.85
CGREF1-201ENST00000260595 SWAP70Q9UH65 585 aa20.37■□□□□ 0.85
CGREF1-201ENST00000260595 C12orf60Q5U649 245 aa20.36■□□□□ 0.85
CGREF1-201ENST00000260595 TMEM179Q6ZVK1 233 aa20.36■□□□□ 0.85
CGREF1-201ENST00000260595 PLEKHH3Q7Z736 793 aa20.36■□□□□ 0.85
CGREF1-201ENST00000260595 SIAH1Q8IUQ4 282 aa20.36■□□□□ 0.85
CGREF1-201ENST00000260595 PUS7LQ9H0K6 701 aaKnown RBP20.36■□□□□ 0.85
CGREF1-201ENST00000260595 HMX1Q9NP08 348 aaPredicted RBP20.36■□□□□ 0.85
CGREF1-201ENST00000260595 BTBD7Q9P203 1132 aa20.36■□□□□ 0.85
CGREF1-201ENST00000260595 CYP2D7A0A087X1C5 515 aa20.35■□□□□ 0.85
CGREF1-201ENST00000260595 SPDYE16A6NNV3 312 aaPredicted RBP20.35■□□□□ 0.85
CGREF1-201ENST00000260595 USP17L12C9JPN9 530 aa20.35■□□□□ 0.85
CGREF1-201ENST00000260595 USP17L21D6R901 530 aa20.35■□□□□ 0.85
CGREF1-201ENST00000260595 MPHOSPH10O00566 681 aaKnown RBP20.35■□□□□ 0.85
CGREF1-201ENST00000260595 KIAA1755Q5JYT7 1200 aa20.35■□□□□ 0.85
CGREF1-201ENST00000260595 AKR1B1P15121 316 aa20.34■□□□□ 0.85
CGREF1-201ENST00000260595 ZSCAN25Q6NSZ9 544 aa20.34■□□□□ 0.85
CGREF1-201ENST00000260595 CCAR1Q8IX12 1150 aaKnown RBP20.34■□□□□ 0.85
CGREF1-201ENST00000260595 SLC4A4Q9Y6R1 1079 aa20.34■□□□□ 0.85
CGREF1-201ENST00000260595 PRKAR2AP13861 404 aaKnown RBP20.33■□□□□ 0.85
CGREF1-201ENST00000260595 RGS2P41220 211 aa20.33■□□□□ 0.85
CGREF1-201ENST00000260595 CDK8P49336 464 aa20.33■□□□□ 0.85
CGREF1-201ENST00000260595 MNX1P50219 401 aaPredicted RBP20.33■□□□□ 0.85
CGREF1-201ENST00000260595 CCNA1P78396 465 aa20.33■□□□□ 0.85
CGREF1-201ENST00000260595 CCL14Q16627 93 aa20.33■□□□□ 0.85
CGREF1-201ENST00000260595 CTR9Q6PD62 1173 aa20.33■□□□□ 0.85
CGREF1-201ENST00000260595 C16orf86Q6ZW13 317 aa20.33■□□□□ 0.85
CGREF1-201ENST00000260595 TRMT44Q8IYL2 757 aaKnown RBP20.33■□□□□ 0.85
CGREF1-201ENST00000260595 DIS3LQ8TF46 1054 aaKnown RBP20.33■□□□□ 0.85
CGREF1-201ENST00000260595 PAWRQ96IZ0 340 aaKnown RBP20.33■□□□□ 0.85
CGREF1-201ENST00000260595 ZKSCAN1P17029 563 aaPredicted RBP20.32■□□□□ 0.84
CGREF1-201ENST00000260595 FXR1P51114 621 aaKnown RBP eCLIP20.32■□□□□ 0.84
CGREF1-201ENST00000260595 CACNB2Q08289 660 aaPredicted RBP20.32■□□□□ 0.84
CGREF1-201ENST00000260595 MAP2K5Q13163 448 aa20.32■□□□□ 0.84
CGREF1-201ENST00000260595 CLEC10AQ8IUN9 316 aa20.32■□□□□ 0.84
CGREF1-201ENST00000260595 KBTBD3Q8NAB2 608 aa20.32■□□□□ 0.84
CGREF1-201ENST00000260595 ANKLE1Q8NAG6 615 aa20.32■□□□□ 0.84
CGREF1-201ENST00000260595 CCDC17Q96LX7 622 aa20.32■□□□□ 0.84
CGREF1-201ENST00000260595 STRBPQ96SI9 672 aaKnown RBP20.32■□□□□ 0.84
CGREF1-201ENST00000260595 APBA2Q99767 749 aa20.32■□□□□ 0.84
CGREF1-201ENST00000260595 PCDH10Q9P2E7 1040 aa20.32■□□□□ 0.84
CGREF1-201ENST00000260595 PCDHB15Q9Y5E8 787 aa20.32■□□□□ 0.84
CGREF1-201ENST00000260595 PTPREP23469 700 aa20.31■□□□□ 0.84
CGREF1-201ENST00000260595 COG2Q14746 738 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms