RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 SAP30BPQ9UHR5 308 aaKnown RBP21.54■■□□□ 1.04
PPFIA1-201ENST00000253925 RFX7Q2KHR2 1363 aa21.54■■□□□ 1.04
PPFIA1-201ENST00000253925 DESP17661 470 aa21.54■■□□□ 1.04
PPFIA1-201ENST00000253925 TFAP4Q01664 338 aa21.54■■□□□ 1.04
PPFIA1-201ENST00000253925 HS2ST1Q7LGA3 356 aa21.54■■□□□ 1.04
PPFIA1-201ENST00000253925 EBAG9O00559 213 aa21.53■■□□□ 1.04
PPFIA1-201ENST00000253925 GNPATO15228 680 aa21.53■■□□□ 1.04
PPFIA1-201ENST00000253925 BCAMP50895 628 aa21.53■■□□□ 1.04
PPFIA1-201ENST00000253925 CARD10Q9BWT7 1032 aa21.53■■□□□ 1.04
PPFIA1-201ENST00000253925 PCP11498 1178 aaKnown RBP21.53■■□□□ 1.04
PPFIA1-201ENST00000253925 PPP4R3AQ6IN85 833 aa21.53■■□□□ 1.04
PPFIA1-201ENST00000253925 FAM76AQ8TAV0 307 aa21.53■■□□□ 1.04
PPFIA1-201ENST00000253925 RPL13P26373 211 aaKnown RBP21.53■■□□□ 1.04
PPFIA1-201ENST00000253925 TXKP42681 527 aa21.53■■□□□ 1.04
PPFIA1-201ENST00000253925 PPP1R13BQ96KQ4 1090 aa21.53■■□□□ 1.04
PPFIA1-201ENST00000253925 ALDH8A1Q9H2A2 487 aaPredicted RBP21.53■■□□□ 1.04
PPFIA1-201ENST00000253925 NRKQ7Z2Y5 1582 aa21.53■■□□□ 1.04
PPFIA1-201ENST00000253925 TFCP2L1Q9NZI6 479 aa21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 LRWD1Q9UFC0 647 aa21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 ADGRB1O14514 1584 aa21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 BRD3Q15059 726 aa21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 SARM1Q6SZW1 724 aa21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 ARFGAP2Q8N6H7 521 aa21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 SDR42E1Q8WUS8 393 aa21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 SECISBP2LQ93073 1101 aaKnown RBP21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 OR8K1Q8NGG5 319 aa21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 PUS7LQ9H0K6 701 aaKnown RBP21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 ZNF219Q9P2Y4 722 aaPredicted RBP21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 NPHP4O75161 1426 aaPredicted RBP21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 USP42Q9H9J4 1324 aaKnown RBP21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 FMNL1O95466 1100 aaPredicted RBP21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 ERCC5P28715 1186 aaPredicted RBP21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 CCDC84Q86UT8 332 aaPredicted RBP21.52■■□□□ 1.04
PPFIA1-201ENST00000253925 CCDC174Q6PII3 467 aa21.52■■□□□ 1.03
PPFIA1-201ENST00000253925 ZNF622Q969S3 477 aaKnown RBP eCLIP21.52■■□□□ 1.031e-6■■□□□ 13.5
PPFIA1-201ENST00000253925 IQCDQ96DY2 449 aa21.52■■□□□ 1.03
PPFIA1-201ENST00000253925 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.52■■□□□ 1.03
PPFIA1-201ENST00000253925 NCOA3Q9Y6Q9 1424 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 ZC3H13Q5T200 1668 aaKnown RBP21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 DMTNQ08495 405 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 FAM47AQ5JRC9 791 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 CABP7Q86V35 215 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 DESI2Q9BSY9 194 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 RNF26Q9BY78 433 aaPredicted RBP21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 VWA3BQ502W6 1294 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 DDIT3P35638 169 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 CFAP58Q5T655 872 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 USP37Q86T82 979 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 CCDC155Q8N6L0 562 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 RASAL2Q9UJF2 1139 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 FAM13AO94988 1023 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 RPS8P62241 208 aaKnown RBP21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 GLT8D2Q9H1C3 349 aa21.51■■□□□ 1.03
PPFIA1-201ENST00000253925 TMEM94Q12767 1356 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 SH2B2O14492 632 aaPredicted RBP21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 DDAH1O94760 285 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 BLIDQ8IZY5 108 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 CNBD1Q8NA66 436 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 WDR17Q8IZU2 1322 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 ATRIPQ8WXE1 791 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 PGBD1Q96JS3 809 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 A0A087WWV3 80 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 GTPBP6O43824 516 aaPredicted RBP21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 IFNAR1P17181 557 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 IFT81Q8WYA0 676 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 GSDMAQ96QA5 445 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 ANKRD62A6NC57 917 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 KCNJ18B7U540 433 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 SCG2P13521 617 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 RAPGEF1Q13905 1077 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 KCNJ12Q14500 433 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 WHAMMP3Q1A5X7 153 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 TSGA10IPQ3SY00 556 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 NBPF14Q5TI25 921 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 FMNL3Q8IVF7 1028 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 RPGRIP1Q96KN7 1286 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 SPTLC3Q9NUV7 552 aa21.5■■□□□ 1.03
PPFIA1-201ENST00000253925 OAS2P29728 719 aaKnown RBP21.49■■□□□ 1.03
PPFIA1-201ENST00000253925 MORC3Q14149 939 aa21.49■■□□□ 1.03
PPFIA1-201ENST00000253925 ASAP1Q9ULH1 1129 aa21.49■■□□□ 1.03
PPFIA1-201ENST00000253925 NEURL4Q96JN8 1562 aa21.49■■□□□ 1.03
PPFIA1-201ENST00000253925 H7C1D1 291 aa21.49■■□□□ 1.03
PPFIA1-201ENST00000253925 PAXIP1Q6ZW49 1069 aaPredicted RBP21.49■■□□□ 1.03
PPFIA1-201ENST00000253925 TRMT1LQ7Z2T5 733 aaKnown RBP21.49■■□□□ 1.03
PPFIA1-201ENST00000253925 UFL1O94874 794 aa21.49■■□□□ 1.03
PPFIA1-201ENST00000253925 GYG1P46976 350 aa21.49■■□□□ 1.03
PPFIA1-201ENST00000253925 AFAP1L1Q8TED9 768 aa21.49■■□□□ 1.03
PPFIA1-201ENST00000253925 GPCPD1Q9NPB8 672 aa21.49■■□□□ 1.03
PPFIA1-201ENST00000253925 IL6STP40189 918 aaPredicted RBP21.48■■□□□ 1.03
PPFIA1-201ENST00000253925 MAGEA1P43355 309 aa21.48■■□□□ 1.03
PPFIA1-201ENST00000253925 PI16Q6UXB8 463 aa21.48■■□□□ 1.03
PPFIA1-201ENST00000253925 OVOS2A0A0J9YW53 1432 aa21.48■■□□□ 1.03
PPFIA1-201ENST00000253925 OVOS2Q6IE36 1432 aa21.48■■□□□ 1.03
PPFIA1-201ENST00000253925 LIFRP42702 1097 aa21.48■■□□□ 1.03
PPFIA1-201ENST00000253925 TRAPPC3LQ5T215 181 aa21.48■■□□□ 1.03
PPFIA1-201ENST00000253925 SNX29Q8TEQ0 813 aa21.48■■□□□ 1.03
PPFIA1-201ENST00000253925 C8orf74Q6P047 294 aa21.48■■□□□ 1.03
PPFIA1-201ENST00000253925 CHRNDQ07001 517 aa21.48■■□□□ 1.03
PPFIA1-201ENST00000253925 LONRF3Q496Y0 759 aa21.48■■□□□ 1.03
PPFIA1-201ENST00000253925 SLC9C1Q4G0N8 1177 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms