RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 USP32Q8NFA0 1604 aa19.19■□□□□ 0.66
ACTN4-201ENST00000252699 CCDC172P0C7W6 258 aa19.19■□□□□ 0.66
ACTN4-201ENST00000252699 GBP3Q9H0R5 595 aa19.19■□□□□ 0.66
ACTN4-201ENST00000252699 HOMER2Q9NSB8 354 aa19.19■□□□□ 0.66
ACTN4-201ENST00000252699 RBM6P78332 1123 aaKnown RBP19.18■□□□□ 0.66
ACTN4-201ENST00000252699 PUF60Q9UHX1 559 aaKnown RBP19.18■□□□□ 0.66
ACTN4-201ENST00000252699 IQSEC2Q5JU85 1478 aa19.18■□□□□ 0.66
ACTN4-201ENST00000252699 TRAF5O00463 557 aa19.18■□□□□ 0.66
ACTN4-201ENST00000252699 ZBED4O75132 1171 aa19.18■□□□□ 0.66
ACTN4-201ENST00000252699 POSTNQ15063 836 aa19.18■□□□□ 0.66
ACTN4-201ENST00000252699 TICAM2Q86XR7 235 aa19.18■□□□□ 0.66
ACTN4-201ENST00000252699 NCAPH2Q6IBW4 605 aa19.18■□□□□ 0.66
ACTN4-201ENST00000252699 CTNND2Q9UQB3 1225 aa19.18■□□□□ 0.66
ACTN4-201ENST00000252699 USP17L8P0C7I0 530 aa19.18■□□□□ 0.66
ACTN4-201ENST00000252699 PPP1R2P41236 205 aa19.18■□□□□ 0.66
ACTN4-201ENST00000252699 CCDC17Q96LX7 622 aa19.18■□□□□ 0.66
ACTN4-201ENST00000252699 LARGE1O95461 756 aa19.17■□□□□ 0.66
ACTN4-201ENST00000252699 MYCLP12524 364 aaPredicted RBP19.17■□□□□ 0.66
ACTN4-201ENST00000252699 TBC1D5Q92609 795 aa19.17■□□□□ 0.66
ACTN4-201ENST00000252699 PFKFB1P16118 471 aa19.17■□□□□ 0.66
ACTN4-201ENST00000252699 HS1BP3Q53T59 392 aa19.17■□□□□ 0.66
ACTN4-201ENST00000252699 CLRN2A0PK11 232 aa19.17■□□□□ 0.66
ACTN4-201ENST00000252699 ARID5AQ03989 594 aa19.17■□□□□ 0.66
ACTN4-201ENST00000252699 INF2Q27J81 1249 aa19.17■□□□□ 0.66
ACTN4-201ENST00000252699 DNAI1Q9UI46 699 aa19.17■□□□□ 0.66
ACTN4-201ENST00000252699 SERPINB13Q9UIV8 391 aa19.17■□□□□ 0.66
ACTN4-201ENST00000252699 NR1I2O75469 434 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 SLFN13Q68D06 897 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 CNNM4Q6P4Q7 775 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 SMIM5Q71RC9 77 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 JADE2Q9NQC1 790 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 PHACTR2O75167 634 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 CABP7Q86V35 215 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 EHBP1Q8NDI1 1231 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 NLRP12P59046 1061 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 TXNRD1Q16881 649 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 LUC7L2Q9Y383 392 aaKnown RBP19.16■□□□□ 0.66
ACTN4-201ENST00000252699 RPL13P26373 211 aaKnown RBP19.16■□□□□ 0.66
ACTN4-201ENST00000252699 ABCB5Q2M3G0 1257 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 ARHGAP27Q6ZUM4 889 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 MASTLQ96GX5 879 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 RNF26Q9BY78 433 aaPredicted RBP19.16■□□□□ 0.66
ACTN4-201ENST00000252699 PSTPIP2Q9H939 334 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 SERTAD1Q9UHV2 236 aa19.16■□□□□ 0.66
ACTN4-201ENST00000252699 SH2B2O14492 632 aaPredicted RBP19.15■□□□□ 0.66
ACTN4-201ENST00000252699 PRDX5P30044 214 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 CCDC102AQ96A19 550 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 COA1Q9GZY4 146 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 ZSWIM4Q9H7M6 989 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 MROH1Q8NDA8 1641 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 NEK11Q8NG66 645 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 CCDC42Q96M95 316 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 PCDHA7Q9UN72 937 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 MACROD2A1Z1Q3 448 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 SLC27A3Q5K4L6 730 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 GPHNQ9NQX3 736 aaPredicted RBP19.15■□□□□ 0.66
ACTN4-201ENST00000252699 PAXBP1Q9Y5B6 917 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 CARMIL3Q8ND23 1372 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 RAD17O75943 681 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 CCDC175P0C221 793 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 CC2D2BQ6DHV5 1058 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 CSRNP1Q96S65 589 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 NFE2L3Q9Y4A8 694 aa19.15■□□□□ 0.66
ACTN4-201ENST00000252699 CD163L1Q9NR16 1453 aa19.14■□□□□ 0.66
ACTN4-201ENST00000252699 NFIXQ14938 502 aa19.14■□□□□ 0.66
ACTN4-201ENST00000252699 ATG9AQ7Z3C6 839 aa19.14■□□□□ 0.66
ACTN4-201ENST00000252699 CRACR2AQ9BSW2 395 aa19.14■□□□□ 0.66
ACTN4-201ENST00000252699 VPS16Q9H269 839 aa19.14■□□□□ 0.66
ACTN4-201ENST00000252699 DYNLL2Q96FJ2 89 aa19.14■□□□□ 0.65
ACTN4-201ENST00000252699 SPATA31A6Q5VVP1 1343 aa19.14■□□□□ 0.65
ACTN4-201ENST00000252699 HSPA1LP34931 641 aa19.14■□□□□ 0.65
ACTN4-201ENST00000252699 HERC4Q5GLZ8 1057 aaPredicted RBP19.14■□□□□ 0.65
ACTN4-201ENST00000252699 DYMQ7RTS9 669 aa19.14■□□□□ 0.65
ACTN4-201ENST00000252699 CSGALNACT2Q8N6G5 542 aa19.14■□□□□ 0.65
ACTN4-201ENST00000252699 CMA1P23946 247 aa19.14■□□□□ 0.65
ACTN4-201ENST00000252699 CCDC93Q567U6 631 aa19.14■□□□□ 0.65
ACTN4-201ENST00000252699 POLR1AO95602 1720 aaPredicted RBP19.14■□□□□ 0.65
ACTN4-201ENST00000252699 FANCCQ00597 558 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 TBC1D8BQ0IIM8 1120 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 PRPF4BQ13523 1007 aaKnown RBP19.13■□□□□ 0.65
ACTN4-201ENST00000252699 PDIA6Q15084 440 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 SWAP70Q9UH65 585 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 RIPOR2Q9Y4F9 1068 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 CPDO75976 1380 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 DDX39AO00148 427 aaKnown RBP19.13■□□□□ 0.65
ACTN4-201ENST00000252699 CLCN1P35523 988 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 LIFRP42702 1097 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 DCAF15Q66K64 600 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 KIAA1468Q9P260 1216 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 ATF5Q9Y2D1 282 aaPredicted RBP19.13■□□□□ 0.65
ACTN4-201ENST00000252699 CLIC4Q9Y696 253 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.13■□□□□ 0.659e-7■■□□□ 11.6
ACTN4-201ENST00000252699 PAK1Q13153 545 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 DNM3Q9UQ16 869 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 SYNRGQ9UMZ2 1314 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 ARHGEF35A5YM69 484 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 PNOCQ13519 176 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 GALNT17Q6IS24 598 aa19.13■□□□□ 0.65
ACTN4-201ENST00000252699 FNBP4Q8N3X1 1017 aaPredicted RBP19.13■□□□□ 0.65
ACTN4-201ENST00000252699 GPT2Q8TD30 523 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms