RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 CWC27Q6UX04 472 aaKnown RBP16.99■□□□□ 0.31
CNN1-201ENST00000252456 C17orf99Q6UX52 265 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 TMEM179Q6ZVK1 233 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 SIAH1Q8IUQ4 282 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 CCDC17Q96LX7 622 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.99■□□□□ 0.31
CNN1-201ENST00000252456 EMILIN3Q9NT22 766 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 A0A1W2PRG0 241 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 C19orf81C9J6K1 198 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 HSPD1P10809 573 aaKnown RBP16.99■□□□□ 0.31
CNN1-201ENST00000252456 PPARAQ07869 468 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 ALX1Q15699 326 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 STK11IPQ8N1F8 1099 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 CCDC136Q96JN2 1154 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 PARK7Q99497 189 aaKnown RBP16.99■□□□□ 0.31
CNN1-201ENST00000252456 KIAA1683Q9H0B3 1180 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 DIAPH3Q9NSV4 1193 aa16.99■□□□□ 0.31
CNN1-201ENST00000252456 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
CNN1-201ENST00000252456 SP3Q02447 781 aa16.98■□□□□ 0.31
CNN1-201ENST00000252456 C12orf42Q96LP6 360 aa16.98■□□□□ 0.31
CNN1-201ENST00000252456 TACC3Q9Y6A5 838 aa16.98■□□□□ 0.31
CNN1-201ENST00000252456 MGAMO43451 1857 aa16.97■□□□□ 0.31
CNN1-201ENST00000252456 HIP1O00291 1037 aa16.97■□□□□ 0.31
CNN1-201ENST00000252456 FGAP02671 866 aa16.97■□□□□ 0.31
CNN1-201ENST00000252456 BCRP11274 1271 aa16.97■□□□□ 0.31
CNN1-201ENST00000252456 CTU1Q7Z7A3 348 aaKnown RBP16.97■□□□□ 0.31
CNN1-201ENST00000252456 CD99L2Q8TCZ2 262 aa16.97■□□□□ 0.31
CNN1-201ENST00000252456 MCOLN1Q9GZU1 580 aa16.97■□□□□ 0.31
CNN1-201ENST00000252456 CPA4Q9UI42 421 aa16.97■□□□□ 0.31
CNN1-201ENST00000252456 PRDM1O75626 825 aa16.96■□□□□ 0.31
CNN1-201ENST00000252456 USP17L2Q6R6M4 530 aa16.96■□□□□ 0.31
CNN1-201ENST00000252456 ANAPC4Q9UJX5 808 aa16.96■□□□□ 0.31
CNN1-201ENST00000252456 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.96■□□□□ 0.31
CNN1-201ENST00000252456 RLFQ13129 1914 aa16.96■□□□□ 0.31
CNN1-201ENST00000252456 MYH4Q9Y623 1939 aa16.96■□□□□ 0.31
CNN1-201ENST00000252456 PARP14Q460N5 1801 aa16.96■□□□□ 0.31
CNN1-201ENST00000252456 HOXA7P31268 230 aaPredicted RBP16.96■□□□□ 0.3
CNN1-201ENST00000252456 ICA1Q05084 483 aa16.96■□□□□ 0.3
CNN1-201ENST00000252456 CTDSPL2Q05D32 466 aa16.96■□□□□ 0.3
CNN1-201ENST00000252456 ZYXQ15942 572 aaKnown RBP16.96■□□□□ 0.3
CNN1-201ENST00000252456 FEZ1Q99689 392 aa16.96■□□□□ 0.3
CNN1-201ENST00000252456 ASCC2Q9H1I8 757 aaPredicted RBP16.96■□□□□ 0.3
CNN1-201ENST00000252456 TMOD4Q9NZQ9 345 aa16.96■□□□□ 0.3
CNN1-201ENST00000252456 IGKV6D-41A0A0C4DH26 115 aa16.95■□□□□ 0.3
CNN1-201ENST00000252456 VCAM1P19320 739 aa16.95■□□□□ 0.3
CNN1-201ENST00000252456 CHMLP26374 656 aa16.95■□□□□ 0.3
CNN1-201ENST00000252456 CTGFP29279 349 aa16.95■□□□□ 0.3
CNN1-201ENST00000252456 KIAA1755Q5JYT7 1200 aa16.95■□□□□ 0.3
CNN1-201ENST00000252456 ERO1AQ96HE7 468 aa16.95■□□□□ 0.3
CNN1-201ENST00000252456 ARHGAP39Q9C0H5 1083 aa16.95■□□□□ 0.3
CNN1-201ENST00000252456 NBPF3Q9H094 633 aa16.95■□□□□ 0.3
CNN1-201ENST00000252456 MKNK2Q9HBH9 465 aa16.95■□□□□ 0.3
CNN1-201ENST00000252456 INCENPQ9NQS7 918 aa16.95■□□□□ 0.3
CNN1-201ENST00000252456 PLIN4Q96Q06 1357 aa16.94■□□□□ 0.3
CNN1-201ENST00000252456 FGRP09769 529 aa16.94■□□□□ 0.3
CNN1-201ENST00000252456 USP14P54578 494 aa16.94■□□□□ 0.3
CNN1-201ENST00000252456 MFAP1P55081 439 aaKnown RBP16.94■□□□□ 0.3
CNN1-201ENST00000252456 LACTBP83111 547 aaPredicted RBP16.94■□□□□ 0.3
CNN1-201ENST00000252456 OTOP1Q7RTM1 612 aa16.94■□□□□ 0.3
CNN1-201ENST00000252456 KANSL2Q9H9L4 492 aa16.94■□□□□ 0.3
CNN1-201ENST00000252456 PNMA3Q9UL41 463 aa16.94■□□□□ 0.3
CNN1-201ENST00000252456 TMX2Q9Y320 296 aa16.94■□□□□ 0.3
CNN1-201ENST00000252456 EEF2P13639 858 aaKnown RBP16.93■□□□□ 0.3
CNN1-201ENST00000252456 PDE4BQ07343 736 aa16.93■□□□□ 0.3
CNN1-201ENST00000252456 PABPC4Q13310 644 aaKnown RBP eCLIP16.93■□□□□ 0.3
CNN1-201ENST00000252456 POTEEQ6S8J3 1075 aa16.93■□□□□ 0.3
CNN1-201ENST00000252456 SMCR8Q8TEV9 937 aaPredicted RBP16.93■□□□□ 0.3
CNN1-201ENST00000252456 P2RX7Q99572 595 aaKnown RBP16.92■□□□□ 0.3
CNN1-201ENST00000252456 ZNF287Q9HBT7 754 aa16.92■□□□□ 0.3
CNN1-201ENST00000252456 A0A0G2JMZ2 1700 aa16.92■□□□□ 0.3
CNN1-201ENST00000252456 RAD50Q92878 1312 aa16.92■□□□□ 0.3
CNN1-201ENST00000252456 SLC3A2P08195 630 aaKnown RBP16.92■□□□□ 0.3
CNN1-201ENST00000252456 HAND2P61296 217 aa16.92■□□□□ 0.3
CNN1-201ENST00000252456 ABHD8Q96I13 439 aa16.92■□□□□ 0.3
CNN1-201ENST00000252456 DSCC1Q9BVC3 393 aa16.92■□□□□ 0.3
CNN1-201ENST00000252456 ARHGEF10LQ9HCE6 1279 aa16.92■□□□□ 0.3
CNN1-201ENST00000252456 TRIM17Q9Y577 477 aa16.92■□□□□ 0.3
CNN1-201ENST00000252456 DOCK3Q8IZD9 2030 aa16.92■□□□□ 0.3
CNN1-201ENST00000252456 ORC4O43929 436 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 OSBPP22059 807 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 HERVK_113P62684 666 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 IRX3P78415 501 aaPredicted RBP16.91■□□□□ 0.3
CNN1-201ENST00000252456 BMP2KLQ5H9B9 411 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 FAM47AQ5JRC9 791 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 TBC1D10CQ8IV04 446 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 ZNF444Q8N0Y2 327 aaPredicted RBP16.91■□□□□ 0.3
CNN1-201ENST00000252456 NEDD1Q8NHV4 660 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 NKX2-3Q8TAU0 364 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 CEP95Q96GE4 821 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 TRIM47Q96LD4 638 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 VCPKMTQ9H867 229 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 EFCC1Q9HA90 598 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 BRCA2P51587 3418 aa16.91■□□□□ 0.3
CNN1-201ENST00000252456 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms