RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 WDR24Q96S15 920 aa14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 VAT1LQ9HCJ6 419 aa14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 CCDC194A0A1B0GVG4 234 aa14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 EVX2Q03828 476 aa14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 PPP2R3AQ06190 1150 aa14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 NOL10Q9BSC4 688 aaKnown RBP14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 HSD3B7Q9H2F3 369 aa14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 TAB2Q9NYJ8 693 aa14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 ITPK1Q13572 414 aa14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 ZNF569Q5MCW4 686 aa14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 AMOTL1Q8IY63 956 aa14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 ENOX1Q8TC92 643 aaKnown RBP14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 CELF1Q92879 486 aaKnown RBP14.31□□□□□ -0.12
RAB3IP-201ENST00000247833 RAD21O60216 631 aa14.3□□□□□ -0.12
RAB3IP-201ENST00000247833 PIP4K2BP78356 416 aa14.3□□□□□ -0.12
RAB3IP-201ENST00000247833 HEATR3Q7Z4Q2 680 aa14.3□□□□□ -0.12
RAB3IP-201ENST00000247833 STAT6P42226 847 aa14.3□□□□□ -0.12
RAB3IP-201ENST00000247833 IQUBQ8NA54 791 aa14.3□□□□□ -0.12
RAB3IP-201ENST00000247833 PRDX5P30044 214 aa14.3□□□□□ -0.12
RAB3IP-201ENST00000247833 RBL2Q08999 1139 aa14.3□□□□□ -0.12
RAB3IP-201ENST00000247833 PAGE5Q96GU1 130 aa14.3□□□□□ -0.12
RAB3IP-201ENST00000247833 INTS13Q9NVM9 706 aa14.3□□□□□ -0.12
RAB3IP-201ENST00000247833 CAMTA2O94983 1202 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 KLRK1P26718 216 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 INTS5Q6P9B9 1019 aaKnown RBP14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 GPIHBP1Q8IV16 184 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 NLRP3Q96P20 1036 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 PRDM4Q9UKN5 801 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 TNS2Q63HR2 1409 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 GOLGA6L9A6NEM1 432 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 HIBADHP31937 336 aaKnown RBP14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 CASP14P31944 242 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 C3orf67Q6ZVT6 689 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 TRERF1Q96PN7 1200 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 STX10O60499 249 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 UBA7P41226 1012 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 MORC3Q14149 939 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 RBM28Q9NW13 759 aaKnown RBP14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 SAP30BPQ9UHR5 308 aaKnown RBP14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 PNPLA7Q6ZV29 1317 aa14.29□□□□□ -0.12
RAB3IP-201ENST00000247833 ZNF142P52746 1687 aaPredicted RBP14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 ACTN4O43707 911 aaKnown RBP14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 ZPR1O75312 459 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 SLFN14P0C7P3 912 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 TC2NQ8N9U0 490 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 A0A087X0B3 334 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 CALM1P0DP23 149 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 CALM2P0DP24 149 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 CALM3P0DP25 149 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 TFAP4Q01664 338 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 SPATA1Q5VX52 437 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 REXO1L1PQ8IX06 675 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 SETDB2Q96T68 719 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 BCL9O00512 1426 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 LMTK3Q96Q04 1460 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 ADAMTS7Q9UKP4 1686 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 WNT7AO00755 349 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 NTSR2O95665 410 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 USP17L8P0C7I0 530 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 KIF5BP33176 963 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 MECOMQ03112 1051 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 SRRTQ9BXP5 876 aaKnown RBP14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 MINPP1Q9UNW1 487 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 PHLPP2Q6ZVD8 1323 aa14.28□□□□□ -0.12
RAB3IP-201ENST00000247833 BMP15O95972 392 aa14.27□□□□□ -0.12
RAB3IP-201ENST00000247833 TUBB4AP04350 444 aa14.27□□□□□ -0.12
RAB3IP-201ENST00000247833 RPS8P62241 208 aaKnown RBP14.27□□□□□ -0.12
RAB3IP-201ENST00000247833 UBXN1Q04323 297 aa14.27□□□□□ -0.12
RAB3IP-201ENST00000247833 FAM182BQ5T319 152 aa14.27□□□□□ -0.12
RAB3IP-201ENST00000247833 ZNF444Q8N0Y2 327 aaPredicted RBP14.27□□□□□ -0.12
RAB3IP-201ENST00000247833 TRIML1Q8N9V2 468 aa14.27□□□□□ -0.12
RAB3IP-201ENST00000247833 FERMT2Q96AC1 680 aa14.27□□□□□ -0.12
RAB3IP-201ENST00000247833 RHOXF2BP0C7M4 288 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 GOLGA8HP0CJ92 632 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 SCG2P13521 617 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 CD44P16070 742 aaKnown RBP14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 MCM6Q14566 821 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 CTR9Q6PD62 1173 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 DYNLL2Q96FJ2 89 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 FAM84BQ96KN1 310 aaPredicted RBP14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 TRIM47Q96LD4 638 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 RHOXF2Q9BQY4 288 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 MAGEC2Q9UBF1 373 aaPredicted RBP14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 SRP68Q9UHB9 627 aaKnown RBP14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 TSPY3P0CV98 308 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 TSPY8P0CW00 308 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 SRBD1Q8N5C6 995 aaKnown RBP14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 ACRBPQ8NEB7 543 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 CTAGE1Q96RT6 745 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 SLF1Q9BQI6 1058 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 CPVLQ9H3G5 476 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 L2HGDHQ9H9P8 463 aa14.27□□□□□ -0.13
RAB3IP-201ENST00000247833 PRPF3O43395 683 aaKnown RBP14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 VEGFAP15692 232 aaPredicted RBP14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 ERCC3P19447 782 aa14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 UBE4AQ14139 1066 aa14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 FAM98CQ17RN3 349 aaKnown RBP14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 NELFBQ8WX92 580 aa14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 ARFGAP3Q9NP61 516 aa14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 GUCA1BQ9UMX6 200 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms