RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 TRIM29Q14134 588 aa21.77■■□□□ 1.08
TNFSF9-201ENST00000245817 CSPP1Q1MSJ5 1256 aa21.77■■□□□ 1.08
TNFSF9-201ENST00000245817 RCSD1Q6JBY9 416 aa21.77■■□□□ 1.08
TNFSF9-201ENST00000245817 ALG1Q9BT22 464 aa21.77■■□□□ 1.08
TNFSF9-201ENST00000245817 ZNF70Q9UC06 446 aaPredicted RBP21.77■■□□□ 1.08
TNFSF9-201ENST00000245817 STK36Q9NRP7 1315 aa21.77■■□□□ 1.08
TNFSF9-201ENST00000245817 FZD9O00144 591 aa21.76■■□□□ 1.07
TNFSF9-201ENST00000245817 PRPF40AO75400 957 aaKnown RBP21.76■■□□□ 1.07
TNFSF9-201ENST00000245817 PNMA1Q8ND90 353 aa21.76■■□□□ 1.07
TNFSF9-201ENST00000245817 RGS22Q8NE09 1264 aa21.76■■□□□ 1.07
TNFSF9-201ENST00000245817 CCDC17Q96LX7 622 aa21.76■■□□□ 1.07
TNFSF9-201ENST00000245817 GJA3Q9Y6H8 435 aa21.76■■□□□ 1.07
TNFSF9-201ENST00000245817 CLRN2A0PK11 232 aa21.75■■□□□ 1.07
TNFSF9-201ENST00000245817 DDTLA6NHG4 134 aaPredicted RBP21.75■■□□□ 1.07
TNFSF9-201ENST00000245817 TCP10L2B9ZVM9 353 aa21.75■■□□□ 1.07
TNFSF9-201ENST00000245817 PPP4R3BQ5MIZ7 849 aa21.75■■□□□ 1.07
TNFSF9-201ENST00000245817 CCDC82Q8N4S0 544 aa21.75■■□□□ 1.07
TNFSF9-201ENST00000245817 MYOZ2Q9NPC6 264 aa21.75■■□□□ 1.07
TNFSF9-201ENST00000245817 RNF181Q9P0P0 153 aa21.75■■□□□ 1.07
TNFSF9-201ENST00000245817 GUCY1B3Q02153 619 aa21.75■■□□□ 1.07
TNFSF9-201ENST00000245817 SPDYE2Q495Y8 402 aa21.75■■□□□ 1.07
TNFSF9-201ENST00000245817 C9orf131Q5VYM1 1079 aa21.75■■□□□ 1.07
TNFSF9-201ENST00000245817 MAP3K14Q99558 947 aa21.75■■□□□ 1.07
TNFSF9-201ENST00000245817 VEZTQ9HBM0 779 aa21.75■■□□□ 1.07
TNFSF9-201ENST00000245817 MPHOSPH10O00566 681 aaKnown RBP21.74■■□□□ 1.07
TNFSF9-201ENST00000245817 DEXIO95424 95 aa21.74■■□□□ 1.07
TNFSF9-201ENST00000245817 ECM29Q5VYK3 1845 aa21.74■■□□□ 1.07
TNFSF9-201ENST00000245817 FBXO18Q8NFZ0 1043 aa21.74■■□□□ 1.07
TNFSF9-201ENST00000245817 DPF2Q92785 391 aa21.74■■□□□ 1.07
TNFSF9-201ENST00000245817 CHAMP1Q96JM3 812 aa21.74■■□□□ 1.07
TNFSF9-201ENST00000245817 TMEM47Q9BQJ4 181 aa21.74■■□□□ 1.07
TNFSF9-201ENST00000245817 TOP1P11387 765 aaKnown RBP21.73■■□□□ 1.07
TNFSF9-201ENST00000245817 SHMT1P34896 483 aa21.73■■□□□ 1.07
TNFSF9-201ENST00000245817 GNAQP50148 359 aa21.73■■□□□ 1.07
TNFSF9-201ENST00000245817 KRT85P78386 507 aa21.73■■□□□ 1.07
TNFSF9-201ENST00000245817 DNM1Q05193 864 aaKnown RBP21.73■■□□□ 1.07
TNFSF9-201ENST00000245817 FKBP1CQ5VVH2 108 aa21.73■■□□□ 1.07
TNFSF9-201ENST00000245817 FAM151AQ8WW52 585 aa21.73■■□□□ 1.07
TNFSF9-201ENST00000245817 CEP95Q96GE4 821 aa21.73■■□□□ 1.07
TNFSF9-201ENST00000245817 RNF26Q9BY78 433 aaPredicted RBP21.73■■□□□ 1.07
TNFSF9-201ENST00000245817 DICER1Q9UPY3 1922 aaKnown RBP21.73■■□□□ 1.07
TNFSF9-201ENST00000245817 PLIN4Q96Q06 1357 aa21.73■■□□□ 1.07
TNFSF9-201ENST00000245817 AKR1B1P15121 316 aa21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 RESTQ13127 1097 aa21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 CERKLQ49MI3 558 aaPredicted RBP21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 SH3BP5LQ7L8J4 393 aa21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 CMTR1Q8N1G2 835 aaKnown RBP21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 CSRNP1Q96S65 589 aa21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 LMBRD1Q9NUN5 540 aa21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 ATRNL1Q5VV63 1379 aa21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 XBP1P17861 261 aa21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 GMPSP49915 693 aaPredicted RBP21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 ZNF280AP59817 542 aaPredicted RBP21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 TMTC3Q6ZXV5 915 aa21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 NBPF11Q86T75 865 aa21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 MTMR4Q9NYA4 1195 aa21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 CNPY2Q9Y2B0 182 aa21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 DDX49Q9Y6V7 483 aaKnown RBP21.72■■□□□ 1.07
TNFSF9-201ENST00000245817 COL2A1P02458 1487 aaPredicted RBP21.71■■□□□ 1.07
TNFSF9-201ENST00000245817 WNT10BO00744 389 aa21.71■■□□□ 1.07
TNFSF9-201ENST00000245817 TNNI2P48788 182 aa21.71■■□□□ 1.07
TNFSF9-201ENST00000245817 GNL2Q13823 731 aaKnown RBP21.71■■□□□ 1.07
TNFSF9-201ENST00000245817 RBM26Q5T8P6 1007 aaKnown RBP21.71■■□□□ 1.07
TNFSF9-201ENST00000245817 PRPF3O43395 683 aaKnown RBP21.7■■□□□ 1.06
TNFSF9-201ENST00000245817 TTLL1O95922 423 aa21.7■■□□□ 1.06
TNFSF9-201ENST00000245817 OTUD7BQ6GQQ9 843 aa21.7■■□□□ 1.06
TNFSF9-201ENST00000245817 MICALL2Q8IY33 904 aa21.7■■□□□ 1.06
TNFSF9-201ENST00000245817 CNOT7Q9UIV1 285 aaKnown RBP21.7■■□□□ 1.06
TNFSF9-201ENST00000245817 MTMR7Q9Y216 660 aa21.7■■□□□ 1.06
TNFSF9-201ENST00000245817 FIBPO43427 364 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 PLEKHA8P1O95397 391 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 GRM4Q14833 912 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 USP48Q86UV5 1035 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 FAM83AQ86UY5 434 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 ZBED3Q96IU2 234 aaPredicted RBP21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 AIFM3Q96NN9 605 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 GDPD2Q9HCC8 539 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 RBM27Q9P2N5 1060 aaKnown RBP21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 HERC5Q9UII4 1024 aaKnown RBP21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 CFAP45Q9UL16 551 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 V9GY48 417 aaPredicted RBP21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 H7C1D1 291 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 SAFBQ15424 915 aaKnown RBP eCLIP21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 NBPF9Q3BBW0 867 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 KRT40Q6A162 431 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 METTL16Q86W50 562 aaKnown RBP21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 ZNF396Q96N95 335 aaPredicted RBP21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 LZTS2Q9BRK4 669 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 SCAND2PQ9GZW5 306 aaPredicted RBP21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 DNAJC18Q9H819 358 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 CLIP2Q9UDT6 1046 aa21.69■■□□□ 1.06
TNFSF9-201ENST00000245817 FAM196BA6NMK8 535 aa21.68■■□□□ 1.06
TNFSF9-201ENST00000245817 NOVP48745 357 aa21.68■■□□□ 1.06
TNFSF9-201ENST00000245817 TNFAIP1Q13829 316 aa21.68■■□□□ 1.06
TNFSF9-201ENST00000245817 TATDN1Q6P1N9 297 aa21.68■■□□□ 1.06
TNFSF9-201ENST00000245817 FAM173BQ6P4H8 233 aa21.68■■□□□ 1.06
TNFSF9-201ENST00000245817 BRAPQ7Z569 592 aa21.68■■□□□ 1.06
TNFSF9-201ENST00000245817 TMEM87AQ8NBN3 555 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms