RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ADRA2BP18089 450 aa25.12■■□□□ 1.61
RNF39-201ENST00000244360 KRT2P35908 639 aa25.12■■□□□ 1.61
RNF39-201ENST00000244360 CCZ1BP86790 482 aa25.12■■□□□ 1.61
RNF39-201ENST00000244360 CCZ1P86791 482 aaPredicted RBP25.12■■□□□ 1.61
RNF39-201ENST00000244360 GRIN1Q05586 938 aa25.12■■□□□ 1.61
RNF39-201ENST00000244360 FAM196AQ6ZSG2 479 aa25.12■■□□□ 1.61
RNF39-201ENST00000244360 NYAP1Q6ZVC0 841 aa25.12■■□□□ 1.61
RNF39-201ENST00000244360 NOL10Q9BSC4 688 aaKnown RBP25.12■■□□□ 1.61
RNF39-201ENST00000244360 CABP5Q9NP86 173 aa25.12■■□□□ 1.61
RNF39-201ENST00000244360 V9GY48 417 aaPredicted RBP25.12■■□□□ 1.61
RNF39-201ENST00000244360 CNBD1Q8NA66 436 aa25.11■■□□□ 1.61
RNF39-201ENST00000244360 HSD3B7Q9H2F3 369 aa25.11■■□□□ 1.61
RNF39-201ENST00000244360 XDHP47989 1333 aa25.11■■□□□ 1.61
RNF39-201ENST00000244360 PDE4BQ07343 736 aa25.1■■□□□ 1.61
RNF39-201ENST00000244360 NCBP1Q09161 790 aaKnown RBP25.1■■□□□ 1.61
RNF39-201ENST00000244360 PTPN14Q15678 1187 aa25.1■■□□□ 1.61
RNF39-201ENST00000244360 FOXP4Q8IVH2 680 aaPredicted RBP25.1■■□□□ 1.61
RNF39-201ENST00000244360 NPHP1O15259 732 aa25.1■■□□□ 1.61
RNF39-201ENST00000244360 ONECUT3O60422 494 aaPredicted RBP25.1■■□□□ 1.61
RNF39-201ENST00000244360 ARID5BQ14865 1188 aa25.1■■□□□ 1.61
RNF39-201ENST00000244360 FILIP1Q7Z7B0 1213 aa25.1■■□□□ 1.61
RNF39-201ENST00000244360 CCDC150Q8NCX0 1101 aa25.1■■□□□ 1.61
RNF39-201ENST00000244360 TNFRSF25Q93038 417 aa25.1■■□□□ 1.61
RNF39-201ENST00000244360 ANKIB1Q9P2G1 1089 aa25.1■■□□□ 1.61
RNF39-201ENST00000244360 HOOK1Q9UJC3 728 aaKnown RBP25.1■■□□□ 1.61
RNF39-201ENST00000244360 ROBO3Q96MS0 1386 aa25.1■■□□□ 1.61
RNF39-201ENST00000244360 NPY5RQ15761 445 aa25.09■■□□□ 1.61
RNF39-201ENST00000244360 FEZ1Q99689 392 aa25.09■■□□□ 1.61
RNF39-201ENST00000244360 XPO4Q9C0E2 1151 aaKnown RBP25.09■■□□□ 1.61
RNF39-201ENST00000244360 PCDHA5Q9Y5H7 936 aa25.09■■□□□ 1.61
RNF39-201ENST00000244360 TRIM75PA6NK02 468 aa25.09■■□□□ 1.61
RNF39-201ENST00000244360 NMT2O60551 498 aa25.09■■□□□ 1.61
RNF39-201ENST00000244360 FAM47AQ5JRC9 791 aa25.09■■□□□ 1.61
RNF39-201ENST00000244360 CTCFLQ8NI51 663 aaPredicted RBP25.09■■□□□ 1.61
RNF39-201ENST00000244360 LDHBP07195 334 aaKnown RBP25.08■■□□□ 1.61
RNF39-201ENST00000244360 MYL5Q02045 173 aa25.08■■□□□ 1.61
RNF39-201ENST00000244360 SPECC1Q5M775 1068 aa25.08■■□□□ 1.61
RNF39-201ENST00000244360 NT5DC1Q5TFE4 455 aa25.08■■□□□ 1.61
RNF39-201ENST00000244360 RCSD1Q6JBY9 416 aa25.08■■□□□ 1.61
RNF39-201ENST00000244360 SRBD1Q8N5C6 995 aaKnown RBP25.08■■□□□ 1.61
RNF39-201ENST00000244360 IFNKQ9P0W0 207 aa25.08■■□□□ 1.61
RNF39-201ENST00000244360 JAG2Q9Y219 1238 aa25.08■■□□□ 1.61
RNF39-201ENST00000244360 C12orf60Q5U649 245 aa25.08■■□□□ 1.6
RNF39-201ENST00000244360 SLC51AQ86UW1 340 aa25.08■■□□□ 1.6
RNF39-201ENST00000244360 CCAR2Q8N163 923 aaKnown RBP25.08■■□□□ 1.6
RNF39-201ENST00000244360 CERKQ8TCT0 537 aa25.08■■□□□ 1.6
RNF39-201ENST00000244360 LRRC4BQ9NT99 713 aa25.08■■□□□ 1.6
RNF39-201ENST00000244360 MCM9Q9NXL9 1143 aa25.08■■□□□ 1.6
RNF39-201ENST00000244360 CGNQ9P2M7 1197 aaKnown RBP25.08■■□□□ 1.6
RNF39-201ENST00000244360 FAM205CA6NFA0 338 aa25.07■■□□□ 1.6
RNF39-201ENST00000244360 MYO1BO43795 1136 aa25.07■■□□□ 1.6
RNF39-201ENST00000244360 NRDCO43847 1150 aa25.07■■□□□ 1.6
RNF39-201ENST00000244360 BMP15O95972 392 aa25.07■■□□□ 1.6
RNF39-201ENST00000244360 KCNJ6P48051 423 aa25.07■■□□□ 1.6
RNF39-201ENST00000244360 EARS2Q5JPH6 523 aaKnown RBP25.07■■□□□ 1.6
RNF39-201ENST00000244360 ISM2Q6H9L7 571 aa25.07■■□□□ 1.6
RNF39-201ENST00000244360 PRR5LQ6MZQ0 368 aa25.07■■□□□ 1.6
RNF39-201ENST00000244360 PKNOX2Q96KN3 472 aa25.07■■□□□ 1.6
RNF39-201ENST00000244360 hCG_1642624A0A1W2PR95 340 aa25.06■■□□□ 1.6
RNF39-201ENST00000244360 PPP4CP60510 307 aa25.06■■□□□ 1.6
RNF39-201ENST00000244360 GSTO1P78417 241 aa25.06■■□□□ 1.6
RNF39-201ENST00000244360 POSTNQ15063 836 aa25.06■■□□□ 1.6
RNF39-201ENST00000244360 CRY2Q49AN0 593 aa25.06■■□□□ 1.6
RNF39-201ENST00000244360 ZNF804AQ7Z570 1209 aa25.06■■□□□ 1.6
RNF39-201ENST00000244360 BRMS1Q9HCU9 246 aa25.06■■□□□ 1.6
RNF39-201ENST00000244360 SMC2O95347 1197 aa25.06■■□□□ 1.6
RNF39-201ENST00000244360 USP17L8P0C7I0 530 aa25.06■■□□□ 1.6
RNF39-201ENST00000244360 ANKS1AQ92625 1134 aa25.06■■□□□ 1.6
RNF39-201ENST00000244360 BCL11BQ9C0K0 894 aaPredicted RBP25.06■■□□□ 1.6
RNF39-201ENST00000244360 CSRNP2Q9H175 543 aa25.06■■□□□ 1.6
RNF39-201ENST00000244360 UBR3Q6ZT12 1888 aa25.06■■□□□ 1.6
RNF39-201ENST00000244360 TSPY2A6NKD2 308 aa25.05■■□□□ 1.6
RNF39-201ENST00000244360 FOXN1O15353 648 aa25.05■■□□□ 1.6
RNF39-201ENST00000244360 POLR2DO15514 142 aaKnown RBP25.05■■□□□ 1.6
RNF39-201ENST00000244360 ACTN4O43707 911 aaKnown RBP25.05■■□□□ 1.6
RNF39-201ENST00000244360 BMP6P22004 513 aa25.05■■□□□ 1.6
RNF39-201ENST00000244360 SARSP49591 514 aaKnown RBP25.05■■□□□ 1.6
RNF39-201ENST00000244360 OLFM4Q6UX06 510 aa25.05■■□□□ 1.6
RNF39-201ENST00000244360 FANCCQ00597 558 aa25.05■■□□□ 1.6
RNF39-201ENST00000244360 KANK3Q6NY19 840 aa25.05■■□□□ 1.6
RNF39-201ENST00000244360 SERTAD1Q9UHV2 236 aa25.05■■□□□ 1.6
RNF39-201ENST00000244360 TUBB4AP04350 444 aa25.04■■□□□ 1.6
RNF39-201ENST00000244360 LMOD1P29536 600 aaPredicted RBP25.04■■□□□ 1.6
RNF39-201ENST00000244360 SH3RF3Q8TEJ3 882 aaPredicted RBP25.04■■□□□ 1.6
RNF39-201ENST00000244360 MAN1B1Q9UKM7 699 aa25.04■■□□□ 1.6
RNF39-201ENST00000244360 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.04■■□□□ 1.6
RNF39-201ENST00000244360 USP27XA6NNY8 438 aa25.04■■□□□ 1.6
RNF39-201ENST00000244360 SCG2P13521 617 aa25.04■■□□□ 1.6
RNF39-201ENST00000244360 ATP2B1P20020 1258 aa25.04■■□□□ 1.6
RNF39-201ENST00000244360 UTP14CQ5TAP6 766 aaKnown RBP25.04■■□□□ 1.6
RNF39-201ENST00000244360 DGKHQ86XP1 1220 aa25.04■■□□□ 1.6
RNF39-201ENST00000244360 PFKFB3Q16875 520 aaPredicted RBP25.03■■□□□ 1.6
RNF39-201ENST00000244360 TRIML1Q8N9V2 468 aa25.03■■□□□ 1.6
RNF39-201ENST00000244360 KIF18AQ8NI77 898 aa25.03■■□□□ 1.6
RNF39-201ENST00000244360 SPATA20Q8TB22 786 aa25.03■■□□□ 1.6
RNF39-201ENST00000244360 ZNF592Q92610 1267 aa25.03■■□□□ 1.6
RNF39-201ENST00000244360 FERMT2Q96AC1 680 aa25.03■■□□□ 1.6
RNF39-201ENST00000244360 BAG3O95817 575 aa25.02■■□□□ 1.6
RNF39-201ENST00000244360 KIF5BP33176 963 aa25.02■■□□□ 1.6
RNF39-201ENST00000244360 USP5P45974 858 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms