RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 OTUD6BQ8N6M0 293 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 TBC1D16Q8TBP0 767 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 ZBED3Q96IU2 234 aaPredicted RBP4.29□□□□□ -1.72
UFM1-201ENST00000239878 ZNF512BQ96KM6 892 aaPredicted RBP4.29□□□□□ -1.72
UFM1-201ENST00000239878 FAM161BQ96MY7 647 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 MTA3Q9BTC8 594 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 DDX19BQ9UMR2 479 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 MROH5Q6ZUA9 1318 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 C2orf72A6NCS6 295 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 DDX11L8A8MPP1 907 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 YDJCA8MPS7 323 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 GRIN3BO60391 1043 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 GNAI2P04899 355 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 XRCC5P13010 732 aaKnown RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 RBM5P52756 815 aaKnown RBP eCLIP4.28□□□□□ -1.72
UFM1-201ENST00000239878 SWI5Q1ZZU3 235 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 FMNL3Q8IVF7 1028 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 MICALL2Q8IY33 904 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 PRIMPOLQ96LW4 560 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 RASSF4Q9H2L5 321 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 CXorf56Q9H5V9 222 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 TTF2Q9UNY4 1162 aaKnown RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 XDHP47989 1333 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 SALL1Q9NSC2 1324 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 GOLGB1Q14789 3259 aaKnown RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 WTIPA6NIX2 430 aaPredicted RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 HOXA2O43364 376 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 EVI5O60447 810 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 SASH1O94885 1247 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 UBTFL1P0CB47 393 aaPredicted RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 KLRK1P26718 216 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 INHBEP58166 350 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 RASSF7Q02833 373 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 FILIP1Q7Z7B0 1213 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 PUS3Q9BZE2 481 aaKnown RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 ZNF446Q9NWS9 450 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 G3BP2Q9UN86 482 aaKnown RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 EYA2O00167 538 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 C21orf2O43822 256 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 CHRNDQ07001 517 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 LRRC24Q50LG9 513 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 ZC3H12AQ5D1E8 599 aaKnown RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 DDX46Q7L014 1031 aaKnown RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 RPAP2Q8IXW5 612 aaPredicted RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 C17orf53Q8N3J3 647 aaPredicted RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 RPGRQ92834 1020 aaKnown RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 CDC5LQ99459 802 aaKnown RBP4.28□□□□□ -1.72
UFM1-201ENST00000239878 BRMS1Q9HCU9 246 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 ST7Q9NRC1 585 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 CHMP5Q9NZZ3 219 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 CTNNA3Q9UI47 895 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 LCMT1Q9UIC8 334 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 LEMD3Q9Y2U8 911 aa4.28□□□□□ -1.72
UFM1-201ENST00000239878 FAM205AQ6ZU69 1335 aa4.28□□□□□ -1.73
UFM1-201ENST00000239878 ZNF541Q9H0D2 1346 aa4.28□□□□□ -1.73
UFM1-201ENST00000239878 COL2A1P02458 1487 aaPredicted RBP4.27□□□□□ -1.73
UFM1-201ENST00000239878 UTRNP46939 3433 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 ANKRD18BA2A2Z9 1011 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 USP17L5A8MUK1 530 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 PDGFRBP09619 1106 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 LMNB1P20700 586 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 BDNFP23560 247 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 MCM5P33992 734 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 IARSP41252 1262 aaKnown RBP4.27□□□□□ -1.73
UFM1-201ENST00000239878 RACK1P63244 317 aaKnown RBP4.27□□□□□ -1.73
UFM1-201ENST00000239878 PADI6Q6TGC4 694 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 ANKRD18AQ8IVF6 992 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 C10orf67Q8IYJ2 551 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 RNPC3Q96LT9 517 aaKnown RBP4.27□□□□□ -1.73
UFM1-201ENST00000239878 RBSNQ9H1K0 784 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 DCTPP1Q9H773 170 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 ANO2Q9NQ90 1003 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 DDX41Q9UJV9 622 aaKnown RBP4.27□□□□□ -1.73
UFM1-201ENST00000239878 PCDHGC3Q9UN70 934 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 IBSPP21815 317 aaPredicted RBP4.27□□□□□ -1.73
UFM1-201ENST00000239878 ZNF280AP59817 542 aaPredicted RBP4.27□□□□□ -1.73
UFM1-201ENST00000239878 UBE4AQ14139 1066 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 SLFNL1Q499Z3 407 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 KRBA2Q6ZNG9 492 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 TXNRD3Q86VQ6 643 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 RNF135Q8IUD6 432 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 RAVER1Q8IY67 606 aaKnown RBP4.27□□□□□ -1.73
UFM1-201ENST00000239878 TMEM87AQ8NBN3 555 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 TDRD7Q8NHU6 1098 aaKnown RBP4.27□□□□□ -1.73
UFM1-201ENST00000239878 RPS6KC1Q96S38 1066 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 ANKRD2Q9GZV1 360 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 TAOK3Q9H2K8 898 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 PGAP2Q9UHJ9 254 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 MYH7P12883 1935 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 OTOFQ9HC10 1997 aa4.27□□□□□ -1.73
UFM1-201ENST00000239878 SSC5DA1L4H1 1573 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 TNFRSF10BO14763 440 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 PDE8BO95263 885 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 CASQ1P31415 396 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 IL15P40933 162 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 CCT2P78371 535 aaKnown RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 DAB2P98082 770 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 IFIT5Q13325 482 aaKnown RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 DSC3Q14574 896 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 PPP2R5AQ15172 486 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms