RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 PNMA1Q8ND90 353 aa17.69■□□□□ 0.42
HDHD3-201ENST00000238379 GPT2Q8TD30 523 aa17.69■□□□□ 0.42
HDHD3-201ENST00000238379 PLIN4Q96Q06 1357 aa17.69■□□□□ 0.42
HDHD3-201ENST00000238379 FIBPO43427 364 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 ENTPD3O75355 529 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 GUCY1A2P33402 732 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 KRT85P78386 507 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 RASSF7Q02833 373 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 DLGAP5Q15398 846 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 CTCFLQ8NI51 663 aaPredicted RBP17.68■□□□□ 0.42
HDHD3-201ENST00000238379 MAP3K14Q99558 947 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 RNF26Q9BY78 433 aaPredicted RBP17.68■□□□□ 0.42
HDHD3-201ENST00000238379 ARFGEF1Q9Y6D6 1849 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 PLEKHA8P1O95397 391 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 TMTC3Q6ZXV5 915 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 MTMR14Q8NCE2 650 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 WASF1Q92558 559 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 CEP95Q96GE4 821 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 TMEM47Q9BQJ4 181 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 PI4KBQ9UBF8 816 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 STX8Q9UNK0 236 aa17.68■□□□□ 0.42
HDHD3-201ENST00000238379 ATRNL1Q5VV63 1379 aa17.67■□□□□ 0.42
HDHD3-201ENST00000238379 GADD45BO75293 160 aaPredicted RBP17.67■□□□□ 0.42
HDHD3-201ENST00000238379 DEXIO95424 95 aa17.67■□□□□ 0.42
HDHD3-201ENST00000238379 AKR1B1P15121 316 aa17.67■□□□□ 0.42
HDHD3-201ENST00000238379 GSE1Q14687 1217 aa17.67■□□□□ 0.42
HDHD3-201ENST00000238379 TNIP1Q15025 636 aa17.67■□□□□ 0.42
HDHD3-201ENST00000238379 KRT40Q6A162 431 aa17.67■□□□□ 0.42
HDHD3-201ENST00000238379 DNAJC18Q9H819 358 aa17.67■□□□□ 0.42
HDHD3-201ENST00000238379 TFIP11Q9UBB9 837 aaKnown RBP17.67■□□□□ 0.42
HDHD3-201ENST00000238379 TAOK2Q9UL54 1235 aa17.67■□□□□ 0.42
HDHD3-201ENST00000238379 COL2A1P02458 1487 aaPredicted RBP17.66■□□□□ 0.42
HDHD3-201ENST00000238379 SIPA1L1O43166 1804 aa17.66■□□□□ 0.42
HDHD3-201ENST00000238379 IGKV6D-41A0A0C4DH26 115 aa17.66■□□□□ 0.42
HDHD3-201ENST00000238379 SLURP2P0DP57 97 aa17.66■□□□□ 0.42
HDHD3-201ENST00000238379 ZSCAN29Q8IWY8 852 aaPredicted RBP17.66■□□□□ 0.42
HDHD3-201ENST00000238379 SRBD1Q8N5C6 995 aaKnown RBP17.66■□□□□ 0.42
HDHD3-201ENST00000238379 GZF1Q9H116 711 aaPredicted RBP17.66■□□□□ 0.42
HDHD3-201ENST00000238379 ZNF70Q9UC06 446 aaPredicted RBP17.66■□□□□ 0.42
HDHD3-201ENST00000238379 PRPF3O43395 683 aaKnown RBP17.65■□□□□ 0.42
HDHD3-201ENST00000238379 KIF5BP33176 963 aa17.65■□□□□ 0.42
HDHD3-201ENST00000238379 KIF23Q02241 960 aaPredicted RBP17.65■□□□□ 0.42
HDHD3-201ENST00000238379 CSPP1Q1MSJ5 1256 aa17.65■□□□□ 0.42
HDHD3-201ENST00000238379 METTL16Q86W50 562 aaKnown RBP17.65■□□□□ 0.42
HDHD3-201ENST00000238379 FOXP4Q8IVH2 680 aaPredicted RBP17.65■□□□□ 0.42
HDHD3-201ENST00000238379 ZBED3Q96IU2 234 aaPredicted RBP17.65■□□□□ 0.42
HDHD3-201ENST00000238379 MTMR4Q9NYA4 1195 aa17.65■□□□□ 0.42
HDHD3-201ENST00000238379 FZD9O00144 591 aa17.65■□□□□ 0.42
HDHD3-201ENST00000238379 MBD3O95983 291 aa17.65■□□□□ 0.42
HDHD3-201ENST00000238379 TOP1P11387 765 aaKnown RBP17.65■□□□□ 0.42
HDHD3-201ENST00000238379 GRM4Q14833 912 aa17.65■□□□□ 0.42
HDHD3-201ENST00000238379 PKN1Q16512 942 aa17.65■□□□□ 0.42
HDHD3-201ENST00000238379 SPDYE2Q495Y8 402 aa17.65■□□□□ 0.42
HDHD3-201ENST00000238379 SCAND2PQ9GZW5 306 aaPredicted RBP17.65■□□□□ 0.42
HDHD3-201ENST00000238379 TMOD2Q9NZR1 351 aa17.65■□□□□ 0.42
HDHD3-201ENST00000238379 V9GY48 417 aaPredicted RBP17.65■□□□□ 0.42
HDHD3-201ENST00000238379 CLRN2A0PK11 232 aa17.64■□□□□ 0.41
HDHD3-201ENST00000238379 KIF28PB7ZC32 967 aa17.64■□□□□ 0.41
HDHD3-201ENST00000238379 TRIM29Q14134 588 aa17.64■□□□□ 0.41
HDHD3-201ENST00000238379 CCDC17Q96LX7 622 aa17.64■□□□□ 0.41
HDHD3-201ENST00000238379 FHDC1Q9C0D6 1143 aaPredicted RBP17.64■□□□□ 0.41
HDHD3-201ENST00000238379 ELP1O95163 1332 aa17.64■□□□□ 0.41
HDHD3-201ENST00000238379 CNTNAP5Q8WYK1 1306 aa17.64■□□□□ 0.41
HDHD3-201ENST00000238379 FAM196BA6NMK8 535 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 RPS12P25398 132 aaKnown RBP17.63■□□□□ 0.41
HDHD3-201ENST00000238379 UBE2HP62256 183 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 FKBP1CQ5VVH2 108 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 ATL3Q6DD88 541 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 TATDN1Q6P1N9 297 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 BRAPQ7Z569 592 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 STAG2Q8N3U4 1231 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 LEO1Q8WVC0 666 aaPredicted RBP17.63■□□□□ 0.41
HDHD3-201ENST00000238379 MAD2L2Q9UI95 211 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 CFAP45Q9UL16 551 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 MYH8P13535 1937 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 SHTN1A0MZ66 631 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 TCP10L2B9ZVM9 353 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 MMP14P50281 582 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 ZNF280AP59817 542 aaPredicted RBP17.63■□□□□ 0.41
HDHD3-201ENST00000238379 AKAP17AQ02040 695 aaKnown RBP17.63■□□□□ 0.41
HDHD3-201ENST00000238379 FAM151AQ8WW52 585 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 SPATA32Q96LK8 384 aa17.63■□□□□ 0.41
HDHD3-201ENST00000238379 CNTNAP1P78357 1384 aa17.62■□□□□ 0.41
HDHD3-201ENST00000238379 hCG_1642624A0A1W2PR95 340 aa17.62■□□□□ 0.41
HDHD3-201ENST00000238379 PALM3A6NDB9 673 aaPredicted RBP17.62■□□□□ 0.41
HDHD3-201ENST00000238379 WNT10BO00744 389 aa17.62■□□□□ 0.41
HDHD3-201ENST00000238379 U2AF2P26368 475 aaKnown RBP eCLIP17.62■□□□□ 0.41
HDHD3-201ENST00000238379 ZNF396Q96N95 335 aaPredicted RBP17.62■□□□□ 0.41
HDHD3-201ENST00000238379 USP28Q96RU2 1077 aa17.62■□□□□ 0.41
HDHD3-201ENST00000238379 MYOZ2Q9NPC6 264 aa17.62■□□□□ 0.41
HDHD3-201ENST00000238379 GREB1LQ9C091 1923 aaPredicted RBP17.62■□□□□ 0.41
HDHD3-201ENST00000238379 MMP1P03956 469 aa17.61■□□□□ 0.41
HDHD3-201ENST00000238379 GNAQP50148 359 aa17.61■□□□□ 0.41
HDHD3-201ENST00000238379 EIF6P56537 245 aaKnown RBP17.61■□□□□ 0.41
HDHD3-201ENST00000238379 CAVIN1Q6NZI2 390 aaKnown RBP17.61■□□□□ 0.41
HDHD3-201ENST00000238379 CLEC10AQ8IUN9 316 aa17.61■□□□□ 0.41
HDHD3-201ENST00000238379 SHISA4Q96DD7 197 aa17.61■□□□□ 0.41
HDHD3-201ENST00000238379 MYH15Q9Y2K3 1946 aa17.61■□□□□ 0.41
HDHD3-201ENST00000238379 SLC35G1Q2M3R5 365 aa17.61■□□□□ 0.41
HDHD3-201ENST00000238379 NBPF9Q3BBW0 867 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms