RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 FXR1P51114 621 aaKnown RBP eCLIP15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 RNF187Q5TA31 235 aaPredicted RBP15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 CRACR2AQ9BSW2 395 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 GBP3Q9H0R5 595 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 DACH1Q9UI36 760 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 CASP7P55210 303 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 FILIP1LQ4L180 1135 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 IFNL2Q8IZJ0 200 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 MLKLQ8NB16 471 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 EHD4Q9H223 541 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 L1RE1Q9UN81 338 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 SNAP23O00161 211 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 SSBP05455 408 aaKnown RBP eCLIP15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 AIDAQ96BJ3 306 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 RGPD2P0DJD1 1756 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 TOPAZ1Q8N9V7 1692 aa15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 TOB1P50616 345 aaPredicted RBP15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 CD248Q9HCU0 757 aa15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 LRRIQ3A6PVS8 624 aaPredicted RBP15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 H7C1W4 665 aa15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 MYO1FO00160 1098 aa15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 CD44P16070 742 aaKnown RBP15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 NR1I3Q14994 352 aa15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 RNF217Q8TC41 542 aa15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 ENOX1Q8TC92 643 aaKnown RBP15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 NBPF3Q9H094 633 aa15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 CNNM1Q9NRU3 951 aa15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 TAB2Q9NYJ8 693 aa15.97■□□□□ 0.15
PCDHB3-201ENST00000231130 POTEB2H3BUK9 544 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 SH2B2O14492 632 aaPredicted RBP15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 OTUD6BQ8N6M0 293 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 CTNND2Q9UQB3 1225 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 PRDM1O75626 825 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 ZNF18P17022 549 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 LDHAL6AQ6ZMR3 332 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 EGFL6Q8IUX8 553 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 KIRREL3Q8IZU9 778 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 NAPGQ99747 312 aaPredicted RBP15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 LAMA4Q16363 1823 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 SYNRGQ9UMZ2 1314 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 MCAMP43121 646 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 SAMD1Q6SPF0 538 aaPredicted RBP15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 TRIM22Q8IYM9 498 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 CTCFLQ8NI51 663 aaPredicted RBP15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 ZSWIM5Q9P217 1185 aa15.96■□□□□ 0.15
PCDHB3-201ENST00000231130 ZNF532Q9HCE3 1301 aa15.96■□□□□ 0.14
PCDHB3-201ENST00000231130 SARNPP82979 210 aaKnown RBP15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 MDM2Q00987 491 aaPredicted RBP15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 TMED8Q6PL24 325 aaPredicted RBP15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 LRP10Q7Z4F1 713 aa15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 NAPBQ9H115 298 aa15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 RFX7Q2KHR2 1363 aa15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 BAZ2BQ9UIF8 2168 aaKnown RBP15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 CYP27B1O15528 508 aa15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 CALRP27797 417 aaKnown RBP15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 ACTN3Q08043 901 aaPredicted RBP15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 NAIF1Q69YI7 327 aaPredicted RBP15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 VEZTQ9HBM0 779 aa15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 RNF225M0QZC1 329 aaPredicted RBP15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 ZFYP08048 801 aaPredicted RBP15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 FAM76AQ8TAV0 307 aa15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 CAGE1Q8TC20 777 aa15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 GNL3LQ9NVN8 582 aaKnown RBP15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 WWC3Q9ULE0 1092 aa15.95■□□□□ 0.14
PCDHB3-201ENST00000231130 N4BP2Q86UW6 1770 aaPredicted RBP15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 KRT9P35527 623 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 IFIT5Q13325 482 aaKnown RBP15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 MORC3Q14149 939 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 ZNF174Q15697 407 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 FAM43BQ6ZT52 329 aaPredicted RBP15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 CHP1Q99653 195 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 POLD4Q9HCU8 107 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 VPS54Q9P1Q0 977 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 RPS6KA5O75582 802 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 PAX7P23759 505 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 MATR3P43243 847 aaKnown RBP eCLIP15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 PLCD1P51178 756 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 RRAGBQ5VZM2 374 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 KRT28Q7Z3Y7 464 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 CABS1Q96KC9 395 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 FBXO2Q9UK22 296 aaPredicted RBP15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 ABCC6O95255 1503 aa15.94■□□□□ 0.14
PCDHB3-201ENST00000231130 ZEB2O60315 1214 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 KCNV1Q6PIU1 500 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 ARMT1Q9H993 441 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 PIH1D3Q9NQM4 214 aaKnown RBP15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 FAM217BQ9NTX9 383 aaPredicted RBP15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 SLIT1O75093 1534 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 A0A1B0GTH6 734 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 PRKAB2O43741 272 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 MFAP3LO75121 409 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 GYPCP04921 128 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 NTRK3Q16288 839 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 KAT14Q9H8E8 782 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 ODF2LQ9ULJ1 636 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 A0A087X0B3 334 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 GOLGA6CA6NDK9 693 aa15.93■□□□□ 0.14
PCDHB3-201ENST00000231130 MINDY4BA8MYZ0 360 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms