RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 BICC1Q9H694 974 aaKnown RBP9.43□□□□□ -0.9
SPARC-201ENST00000231061 SNX14Q9Y5W7 946 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 A0A0B4J203 849 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 EIF4A1P60842 406 aaKnown RBP9.43□□□□□ -0.9
SPARC-201ENST00000231061 GRIK3Q13003 919 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 FIP1L1Q6UN15 594 aaKnown RBP9.43□□□□□ -0.9
SPARC-201ENST00000231061 PI4K2BQ8TCG2 481 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 TBC1D20Q96BZ9 403 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 GSDMAQ96QA5 445 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 ODF2LQ9ULJ1 636 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 SSX2IPQ9Y2D8 614 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 RASA4O43374 803 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 FIBPO43427 364 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 IFIT2P09913 472 aaKnown RBP9.43□□□□□ -0.9
SPARC-201ENST00000231061 CASTP20810 708 aaKnown RBP9.43□□□□□ -0.9
SPARC-201ENST00000231061 INPP5BP32019 993 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 AK2P54819 239 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 WHAMMQ8TF30 809 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 TRIM4Q9C037 500 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 ST7Q9NRC1 585 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 BABAM1Q9NWV8 329 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 NLRP2Q9NX02 1062 aa9.43□□□□□ -0.9
SPARC-201ENST00000231061 SMTNL1A8MU46 457 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 SNX16P57768 344 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 GPR162Q16538 588 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 SEPT14Q6ZU15 432 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 N4BP2L2Q92802 583 aaPredicted RBP9.42□□□□□ -0.9
SPARC-201ENST00000231061 ASIC4Q96FT7 647 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 UROC1Q96N76 676 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 RUFY1Q96T51 708 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 ZNHIT6Q9NWK9 470 aaKnown RBP9.42□□□□□ -0.9
SPARC-201ENST00000231061 CCDC39Q9UFE4 941 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 PPP1R9AQ9ULJ8 1098 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 LZTS1Q9Y250 596 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 COL4A3BPQ9Y5P4 624 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 KATNA1O75449 491 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 SKAP2O75563 359 aaPredicted RBP9.42□□□□□ -0.9
SPARC-201ENST00000231061 BBOX1O75936 387 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 FOSP01100 380 aaPredicted RBP9.42□□□□□ -0.9
SPARC-201ENST00000231061 ELF1P32519 619 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 RCAN1P53805 252 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 BNIP1Q12981 228 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 POLA2Q14181 598 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 PDIA5Q14554 519 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 C1orf141Q5JVX7 400 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 SDE2Q6IQ49 451 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 RASEFQ8IZ41 740 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 CCDC89Q8N998 374 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 LILRB1Q8NHL6 650 aaPredicted RBP9.42□□□□□ -0.9
SPARC-201ENST00000231061 BARX2Q9UMQ3 279 aaPredicted RBP9.42□□□□□ -0.9
SPARC-201ENST00000231061 PA2G4Q9UQ80 394 aaKnown RBP9.42□□□□□ -0.9
SPARC-201ENST00000231061 A6NJR5 290 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 VIMP08670 466 aaKnown RBP9.42□□□□□ -0.9
SPARC-201ENST00000231061 FILIP1LQ4L180 1135 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 BEND3Q5T5X7 828 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 CCDC83Q8IWF9 413 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.42□□□□□ -0.9
SPARC-201ENST00000231061 JAKMIP1Q96N16 626 aaKnown RBP9.42□□□□□ -0.9
SPARC-201ENST00000231061 KCTD5Q9NXV2 234 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 DDX41Q9UJV9 622 aaKnown RBP9.42□□□□□ -0.9
SPARC-201ENST00000231061 PIK3C2AO00443 1686 aa9.42□□□□□ -0.9
SPARC-201ENST00000231061 SGTAO43765 313 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 GLRX3O76003 335 aaKnown RBP9.41□□□□□ -0.9
SPARC-201ENST00000231061 CDC25CP30307 473 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 AIMP1Q12904 312 aaKnown RBP9.41□□□□□ -0.9
SPARC-201ENST00000231061 PARP10Q53GL7 1025 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 PRPF40BQ6NWY9 871 aaKnown RBP9.41□□□□□ -0.9
SPARC-201ENST00000231061 SDCCAG8Q86SQ7 713 aaPredicted RBP9.41□□□□□ -0.9
SPARC-201ENST00000231061 TMEM151BQ8IW70 566 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 WDR66Q8TBY9 1149 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 RUFY2Q8WXA3 655 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 PDLIM2Q96JY6 352 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 LSG1Q9H089 658 aaKnown RBP9.41□□□□□ -0.9
SPARC-201ENST00000231061 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.41□□□□□ -0.9
SPARC-201ENST00000231061 FAM208AQ9UK61 1670 aaKnown RBP9.41□□□□□ -0.9
SPARC-201ENST00000231061 ENO4A6NNW6 628 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 IP6K1Q92551 441 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 CCDC114Q96M63 670 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 NELL2Q99435 816 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 LIMCH1Q9UPQ0 1083 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 MAP3K2Q9Y2U5 619 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 PXDNLA1KZ92 1463 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 FRMD3A2A2Y4 597 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 VPS37CA5D8V6 355 aaPredicted RBP9.41□□□□□ -0.9
SPARC-201ENST00000231061 GRXCR2A6NFK2 248 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 AKR1B10O60218 316 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 PRPHP41219 470 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 MAGEA9P43362 315 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 RAB27AP51159 221 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 PLEKHO1Q53GL0 409 aaPredicted RBP9.41□□□□□ -0.9
SPARC-201ENST00000231061 TTC39AQ5SRH9 613 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 AACSQ86V21 672 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 CTCFLQ8NI51 663 aaPredicted RBP9.41□□□□□ -0.9
SPARC-201ENST00000231061 GIMAP1Q8WWP7 306 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 PIBF1Q8WXW3 757 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 RABEP2Q9H5N1 569 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 TTF2Q9UNY4 1162 aaKnown RBP9.41□□□□□ -0.9
SPARC-201ENST00000231061 ZKSCAN5Q9Y2L8 839 aa9.41□□□□□ -0.9
SPARC-201ENST00000231061 STX6O43752 255 aa9.4□□□□□ -0.9
SPARC-201ENST00000231061 ZSCAN22P10073 491 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms