RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 A0A1B0GVL5 298 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 GOLGA6L9A6NEM1 432 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 PPP6R2O75170 966 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 VIL1P09327 827 aaKnown RBP23.55■■□□□ 1.36
SNX3-201ENST00000230085 TNIP1Q15025 636 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 DACT2Q5SW24 774 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 DPY19L2Q6NUT2 758 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 TRIM65Q6PJ69 517 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 DNAI1Q9UI46 699 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 MYH13Q9UKX3 1938 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 UQCRFS1P1P0C7P4 283 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 CCT2P78371 535 aaKnown RBP23.55■■□□□ 1.36
SNX3-201ENST00000230085 FANCCQ00597 558 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 SLC39A14Q15043 492 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 ANO1Q5XXA6 986 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 ZNF512BQ96KM6 892 aaPredicted RBP23.55■■□□□ 1.36
SNX3-201ENST00000230085 NCOA5Q9HCD5 579 aaKnown RBP23.55■■□□□ 1.36
SNX3-201ENST00000230085 CALCOCO1Q9P1Z2 691 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 DENND2AQ9ULE3 1009 aa23.55■■□□□ 1.36
SNX3-201ENST00000230085 PSME4Q14997 1843 aa23.54■■□□□ 1.36
SNX3-201ENST00000230085 GLTPD2A6NH11 291 aa23.54■■□□□ 1.36
SNX3-201ENST00000230085 EFCAB8A8MWE9 144 aa23.54■■□□□ 1.36
SNX3-201ENST00000230085 SEMA3EO15041 775 aa23.54■■□□□ 1.36
SNX3-201ENST00000230085 CYP2C19P33261 490 aa23.54■■□□□ 1.36
SNX3-201ENST00000230085 CLCN6P51797 869 aa23.54■■□□□ 1.36
SNX3-201ENST00000230085 SF3A1Q15459 793 aaKnown RBP23.54■■□□□ 1.36
SNX3-201ENST00000230085 SYT10Q6XYQ8 523 aa23.54■■□□□ 1.36
SNX3-201ENST00000230085 GPC2Q8N158 579 aa23.54■■□□□ 1.36
SNX3-201ENST00000230085 ORC3Q9UBD5 711 aaPredicted RBP23.54■■□□□ 1.36
SNX3-201ENST00000230085 CLIC4Q9Y696 253 aa23.54■■□□□ 1.36
SNX3-201ENST00000230085 NDUFB9Q9Y6M9 179 aa23.54■■□□□ 1.36
SNX3-201ENST00000230085 FAM205AQ6ZU69 1335 aa23.54■■□□□ 1.36
SNX3-201ENST00000230085 SMC2O95347 1197 aa23.53■■□□□ 1.36
SNX3-201ENST00000230085 ERCC6LQ2NKX8 1250 aa23.53■■□□□ 1.36
SNX3-201ENST00000230085 MB21D2Q8IYB1 491 aaPredicted RBP23.53■■□□□ 1.36
SNX3-201ENST00000230085 SPATA5Q8NB90 893 aa23.53■■□□□ 1.36
SNX3-201ENST00000230085 HPS5Q9UPZ3 1129 aa23.53■■□□□ 1.36
SNX3-201ENST00000230085 AKAP11Q9UKA4 1901 aa23.53■■□□□ 1.36
SNX3-201ENST00000230085 ZNF646O15015 1829 aaPredicted RBP23.53■■□□□ 1.36
SNX3-201ENST00000230085 ECM29Q5VYK3 1845 aa23.53■■□□□ 1.36
SNX3-201ENST00000230085 GOLIM4O00461 696 aa23.52■■□□□ 1.36
SNX3-201ENST00000230085 TADA3O75528 432 aa23.52■■□□□ 1.36
SNX3-201ENST00000230085 CHGBP05060 677 aa23.52■■□□□ 1.36
SNX3-201ENST00000230085 PNMA6AP0CW24 399 aaPredicted RBP23.52■■□□□ 1.36
SNX3-201ENST00000230085 KIF23Q02241 960 aaPredicted RBP23.52■■□□□ 1.36
SNX3-201ENST00000230085 RSBN1LQ6PCB5 846 aaPredicted RBP23.52■■□□□ 1.36
SNX3-201ENST00000230085 CERS5Q8N5B7 392 aa23.52■■□□□ 1.36
SNX3-201ENST00000230085 MYL5Q02045 173 aa23.52■■□□□ 1.36
SNX3-201ENST00000230085 SLC20A2Q08357 652 aa23.52■■□□□ 1.36
SNX3-201ENST00000230085 MFSD14BQ5SR56 506 aa23.52■■□□□ 1.36
SNX3-201ENST00000230085 JMYQ8N9B5 988 aa23.52■■□□□ 1.36
SNX3-201ENST00000230085 ZBTB22O15209 634 aa23.51■■□□□ 1.35
SNX3-201ENST00000230085 ZSCAN12O43309 604 aa23.51■■□□□ 1.35
SNX3-201ENST00000230085 PFKFB1P16118 471 aa23.51■■□□□ 1.35
SNX3-201ENST00000230085 VSTM4Q8IW00 320 aa23.51■■□□□ 1.35
SNX3-201ENST00000230085 IGSF3O75054 1194 aa23.5■■□□□ 1.35
SNX3-201ENST00000230085 ZAP70P43403 619 aa23.5■■□□□ 1.35
SNX3-201ENST00000230085 SYNE3Q6ZMZ3 975 aa23.5■■□□□ 1.35
SNX3-201ENST00000230085 REXO1L1PQ8IX06 675 aa23.5■■□□□ 1.35
SNX3-201ENST00000230085 NOL10Q9BSC4 688 aaKnown RBP23.5■■□□□ 1.35
SNX3-201ENST00000230085 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.5■■□□□ 1.35
SNX3-201ENST00000230085 ARHGAP6O43182 974 aa23.5■■□□□ 1.35
SNX3-201ENST00000230085 GMPSP49915 693 aaPredicted RBP23.5■■□□□ 1.35
SNX3-201ENST00000230085 GRIK5Q16478 980 aa23.5■■□□□ 1.35
SNX3-201ENST00000230085 IMMTQ16891 758 aaKnown RBP23.5■■□□□ 1.35
SNX3-201ENST00000230085 WDR66Q8TBY9 1149 aa23.5■■□□□ 1.35
SNX3-201ENST00000230085 ZNF526Q8TF50 670 aaPredicted RBP23.5■■□□□ 1.35
SNX3-201ENST00000230085 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.5■■□□□ 1.35
SNX3-201ENST00000230085 V9GYY5 206 aaPredicted RBP23.5■■□□□ 1.35
SNX3-201ENST00000230085 FOXP2O15409 715 aa23.49■■□□□ 1.35
SNX3-201ENST00000230085 ARHGAP29Q52LW3 1261 aa23.49■■□□□ 1.35
SNX3-201ENST00000230085 UBXN4Q92575 508 aa23.49■■□□□ 1.35
SNX3-201ENST00000230085 GMLQ99445 158 aa23.49■■□□□ 1.35
SNX3-201ENST00000230085 A0A087WWV3 80 aa23.48■■□□□ 1.35
SNX3-201ENST00000230085 PLA2G4AP47712 749 aa23.48■■□□□ 1.35
SNX3-201ENST00000230085 SCNN1DP51172 638 aa23.48■■□□□ 1.35
SNX3-201ENST00000230085 TBX2Q13207 712 aaPredicted RBP23.48■■□□□ 1.35
SNX3-201ENST00000230085 KIAA0825Q8IV33 1275 aa23.48■■□□□ 1.35
SNX3-201ENST00000230085 TBC1D22AQ8WUA7 517 aa23.48■■□□□ 1.35
SNX3-201ENST00000230085 PDS5AQ29RF7 1337 aaKnown RBP23.48■■□□□ 1.35
SNX3-201ENST00000230085 F8W031 263 aaPredicted RBP23.47■■□□□ 1.35
SNX3-201ENST00000230085 FKBP1AP62942 108 aaKnown RBP23.47■■□□□ 1.35
SNX3-201ENST00000230085 GUCY1B3Q02153 619 aa23.47■■□□□ 1.35
SNX3-201ENST00000230085 TMCO3Q6UWJ1 677 aa23.47■■□□□ 1.35
SNX3-201ENST00000230085 TMEM139Q8IV31 216 aa23.47■■□□□ 1.35
SNX3-201ENST00000230085 AGBL3Q8NEM8 1001 aa23.47■■□□□ 1.35
SNX3-201ENST00000230085 ABCF2Q9UG63 623 aa23.47■■□□□ 1.35
SNX3-201ENST00000230085 SHTN1A0MZ66 631 aa23.47■■□□□ 1.35
SNX3-201ENST00000230085 M0R2C6 588 aa23.47■■□□□ 1.35
SNX3-201ENST00000230085 TULP2O00295 520 aa23.47■■□□□ 1.35
SNX3-201ENST00000230085 PTPAQ15257 358 aa23.47■■□□□ 1.35
SNX3-201ENST00000230085 NCOA7Q8NI08 942 aa23.47■■□□□ 1.35
SNX3-201ENST00000230085 MROH7-TTC4A0A0A0MT08 1334 aa23.47■■□□□ 1.35
SNX3-201ENST00000230085 PRC1O43663 620 aa23.46■■□□□ 1.35
SNX3-201ENST00000230085 RPS12P25398 132 aaKnown RBP23.46■■□□□ 1.35
SNX3-201ENST00000230085 YY1P25490 414 aa23.46■■□□□ 1.35
SNX3-201ENST00000230085 PRDX5P30044 214 aa23.46■■□□□ 1.35
SNX3-201ENST00000230085 RESP18Q5W5W9 173 aa23.46■■□□□ 1.35
SNX3-201ENST00000230085 MSL3Q8N5Y2 521 aaKnown RBP23.46■■□□□ 1.35
SNX3-201ENST00000230085 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms