RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 GREM2Q9H772 168 aa15.96■□□□□ 0.15
SF1-201ENST00000227503 TMOD3Q9NYL9 352 aa15.96■□□□□ 0.15
SF1-201ENST00000227503 CDHR2Q9BYE9 1310 aa15.96■□□□□ 0.15
SF1-201ENST00000227503 ATRNO75882 1429 aa15.96■□□□□ 0.15
SF1-201ENST00000227503 A0A087WUV0 522 aaPredicted RBP15.96■□□□□ 0.14
SF1-201ENST00000227503 PTPAQ15257 358 aa15.96■□□□□ 0.14
SF1-201ENST00000227503 VGLL2Q8N8G2 317 aa15.96■□□□□ 0.14
SF1-201ENST00000227503 SERTAD1Q9UHV2 236 aa15.96■□□□□ 0.14
SF1-201ENST00000227503 ASAP1Q9ULH1 1129 aa15.96■□□□□ 0.14
SF1-201ENST00000227503 ANGEL1Q9UNK9 670 aaKnown RBP15.96■□□□□ 0.14
SF1-201ENST00000227503 FAM169AQ9Y6X4 670 aa15.96■□□□□ 0.14
SF1-201ENST00000227503 ZMYM6O95789 1325 aa15.96■□□□□ 0.14
SF1-201ENST00000227503 RNF225M0QZC1 329 aaPredicted RBP15.95■□□□□ 0.14
SF1-201ENST00000227503 ITGA6P23229 1130 aa15.95■□□□□ 0.14
SF1-201ENST00000227503 FXR1P51114 621 aaKnown RBP eCLIP15.95■□□□□ 0.14
SF1-201ENST00000227503 HLFQ16534 295 aa15.95■□□□□ 0.14
SF1-201ENST00000227503 GIGYF2Q6Y7W6 1299 aaKnown RBP15.95■□□□□ 0.14
SF1-201ENST00000227503 LDHAL6AQ6ZMR3 332 aa15.95■□□□□ 0.14
SF1-201ENST00000227503 ALG1Q9BT22 464 aa15.95■□□□□ 0.14
SF1-201ENST00000227503 PIH1D3Q9NQM4 214 aaKnown RBP15.95■□□□□ 0.14
SF1-201ENST00000227503 SH2B2O14492 632 aaPredicted RBP15.95■□□□□ 0.14
SF1-201ENST00000227503 POLR2DO15514 142 aaKnown RBP15.95■□□□□ 0.14
SF1-201ENST00000227503 MMP14P50281 582 aa15.95■□□□□ 0.14
SF1-201ENST00000227503 NR1I3Q14994 352 aa15.95■□□□□ 0.14
SF1-201ENST00000227503 CCDC91Q7Z6B0 441 aa15.95■□□□□ 0.14
SF1-201ENST00000227503 SUGP1Q8IWZ8 645 aaKnown RBP15.95■□□□□ 0.14
SF1-201ENST00000227503 SLF1Q9BQI6 1058 aa15.95■□□□□ 0.14
SF1-201ENST00000227503 MYL10Q9BUA6 226 aa15.95■□□□□ 0.14
SF1-201ENST00000227503 SENP2Q9HC62 589 aa15.95■□□□□ 0.14
SF1-201ENST00000227503 HPCAL4Q9UM19 191 aa15.95■□□□□ 0.14
SF1-201ENST00000227503 MAP3K15Q6ZN16 1313 aa15.95■□□□□ 0.14
SF1-201ENST00000227503 CCT6AP40227 531 aaKnown RBP15.94■□□□□ 0.14
SF1-201ENST00000227503 RESP18Q5W5W9 173 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 USP49Q70CQ1 688 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 NLRP10Q86W26 655 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 PPFIBP1Q86W92 1011 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 NAPGQ99747 312 aaPredicted RBP15.94■□□□□ 0.14
SF1-201ENST00000227503 POTEB2H3BUK9 544 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 MAP2K2P36507 400 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 TRDNQ13061 729 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 UBE3CQ15386 1083 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 KRT40Q6A162 431 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 BANK1Q8NDB2 785 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 ANKRD20A12PQ8NF67 263 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 PIGBQ92521 554 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 GUCA1BQ9UMX6 200 aa15.94■□□□□ 0.14
SF1-201ENST00000227503 CPP00450 1065 aa15.93■□□□□ 0.14
SF1-201ENST00000227503 MED4Q9NPJ6 270 aa15.93■□□□□ 0.14
SF1-201ENST00000227503 SOS2Q07890 1332 aaPredicted RBP15.93■□□□□ 0.14
SF1-201ENST00000227503 MYO1FO00160 1098 aa15.93■□□□□ 0.14
SF1-201ENST00000227503 GPTP24298 496 aa15.93■□□□□ 0.14
SF1-201ENST00000227503 METAP2P50579 478 aaKnown RBP eCLIP15.93■□□□□ 0.141e-7■□□□□ 10.8
SF1-201ENST00000227503 CTSWP56202 376 aa15.93■□□□□ 0.14
SF1-201ENST00000227503 ERVK-24P63145 666 aa15.93■□□□□ 0.14
SF1-201ENST00000227503 POSTNQ15063 836 aa15.93■□□□□ 0.14
SF1-201ENST00000227503 MMS19Q96T76 1030 aa15.93■□□□□ 0.14
SF1-201ENST00000227503 MAP3K14Q99558 947 aa15.93■□□□□ 0.14
SF1-201ENST00000227503 STRN4Q9NRL3 753 aa15.93■□□□□ 0.14
SF1-201ENST00000227503 HOOK1Q9UJC3 728 aaKnown RBP15.93■□□□□ 0.14
SF1-201ENST00000227503 TTF1Q15361 905 aaPredicted RBP15.93■□□□□ 0.14
SF1-201ENST00000227503 ZC3H4Q9UPT8 1303 aaKnown RBP15.92■□□□□ 0.14
SF1-201ENST00000227503 TCRBV5S4A2TA0A5A2 114 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 ANKRD18BA2A2Z9 1011 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 CCDC172P0C7W6 258 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 APOA5Q6Q788 366 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 JPH2Q9BR39 696 aaPredicted RBP15.92■□□□□ 0.14
SF1-201ENST00000227503 CNNM1Q9NRU3 951 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 MYO6Q9UM54 1294 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 ZNF532Q9HCE3 1301 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 STARD3NLO95772 234 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 AFMP43652 599 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 MDM2Q00987 491 aaPredicted RBP15.92■□□□□ 0.14
SF1-201ENST00000227503 NTRK3Q16288 839 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 MICU3Q86XE3 530 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 BCAS4Q8TDM0 211 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 IGDCC4Q8TDY8 1250 aa15.92■□□□□ 0.14
SF1-201ENST00000227503 B4E1Z4 1266 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 PPP6R2O75170 966 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 IDH1O75874 414 aaKnown RBP15.91■□□□□ 0.14
SF1-201ENST00000227503 PDE8BO95263 885 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 GYPCP04921 128 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 PDE6AP16499 860 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 ARHGAP25P42331 645 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 EIF5P55010 431 aaKnown RBP15.91■□□□□ 0.14
SF1-201ENST00000227503 STIM1Q13586 685 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 STAMQ92783 540 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 WWC3Q9ULE0 1092 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 SUFUQ9UMX1 484 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 XIRP1Q702N8 1843 aaKnown RBP15.91■□□□□ 0.14
SF1-201ENST00000227503 FAM237AA0A1B0GTK4 181 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 AGPSO00116 658 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 MFAP3LO75121 409 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 CDKL5O76039 1030 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 ECM2O94769 699 aaPredicted RBP15.91■□□□□ 0.14
SF1-201ENST00000227503 CD44P16070 742 aaKnown RBP15.91■□□□□ 0.14
SF1-201ENST00000227503 ARID4AP29374 1257 aaPredicted RBP15.91■□□□□ 0.14
SF1-201ENST00000227503 PHKA1P46020 1223 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 IRAK1P51617 712 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 RASGRP2Q7LDG7 609 aa15.91■□□□□ 0.14
SF1-201ENST00000227503 NUTM2AQ8IVF1 878 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms