RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 ANKS1AQ92625 1134 aa21.06■□□□□ 0.96
CBX1-201ENST00000225603 SYNE3Q6ZMZ3 975 aa21.06■□□□□ 0.96
CBX1-201ENST00000225603 TEPSINQ96N21 525 aa21.06■□□□□ 0.96
CBX1-201ENST00000225603 LLPHQ9BRT6 129 aaKnown RBP21.06■□□□□ 0.96
CBX1-201ENST00000225603 ZDHHC9Q9Y397 364 aa21.06■□□□□ 0.96
CBX1-201ENST00000225603 IGKV6D-41A0A0C4DH26 115 aa21.05■□□□□ 0.96
CBX1-201ENST00000225603 TROAPQ12815 778 aa21.05■□□□□ 0.96
CBX1-201ENST00000225603 ANGEL2Q5VTE6 544 aaKnown RBP21.05■□□□□ 0.96
CBX1-201ENST00000225603 TRIM34Q9BYJ4 488 aa21.05■□□□□ 0.96
CBX1-201ENST00000225603 PTPDC1A2A3K4 754 aa21.05■□□□□ 0.96
CBX1-201ENST00000225603 JAG1P78504 1218 aa21.05■□□□□ 0.96
CBX1-201ENST00000225603 MIGA2Q7L4E1 593 aa21.05■□□□□ 0.96
CBX1-201ENST00000225603 STX8Q9UNK0 236 aa21.05■□□□□ 0.96
CBX1-201ENST00000225603 PLIN4Q96Q06 1357 aa21.05■□□□□ 0.96
CBX1-201ENST00000225603 CERKLQ49MI3 558 aaPredicted RBP21.04■□□□□ 0.96
CBX1-201ENST00000225603 CATIPQ7Z7H3 387 aa21.04■□□□□ 0.96
CBX1-201ENST00000225603 FANCBQ8NB91 859 aa21.04■□□□□ 0.96
CBX1-201ENST00000225603 TMEM47Q9BQJ4 181 aa21.04■□□□□ 0.96
CBX1-201ENST00000225603 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.04■□□□□ 0.96
CBX1-201ENST00000225603 MPHOSPH10O00566 681 aaKnown RBP21.04■□□□□ 0.96
CBX1-201ENST00000225603 NOVP48745 357 aa21.04■□□□□ 0.96
CBX1-201ENST00000225603 TNNI2P48788 182 aa21.04■□□□□ 0.96
CBX1-201ENST00000225603 NTRK3Q16288 839 aa21.04■□□□□ 0.96
CBX1-201ENST00000225603 MCTP1Q6DN14 999 aa21.04■□□□□ 0.96
CBX1-201ENST00000225603 DPY19L2Q6NUT2 758 aa21.04■□□□□ 0.96
CBX1-201ENST00000225603 DEFB129Q9H1M3 183 aa21.04■□□□□ 0.96
CBX1-201ENST00000225603 NID2Q14112 1375 aa21.03■□□□□ 0.96
CBX1-201ENST00000225603 MYH8P13535 1937 aa21.03■□□□□ 0.96
CBX1-201ENST00000225603 GDF11O95390 407 aa21.03■□□□□ 0.96
CBX1-201ENST00000225603 FDPSP14324 419 aaKnown RBP21.03■□□□□ 0.96
CBX1-201ENST00000225603 SYT1P21579 422 aa21.03■□□□□ 0.96
CBX1-201ENST00000225603 LMOD1P29536 600 aaPredicted RBP21.03■□□□□ 0.96
CBX1-201ENST00000225603 TNFAIP1Q13829 316 aa21.03■□□□□ 0.96
CBX1-201ENST00000225603 RTN1Q16799 776 aa21.03■□□□□ 0.96
CBX1-201ENST00000225603 CCDC178Q5BJE1 867 aa21.03■□□□□ 0.96
CBX1-201ENST00000225603 KAT14Q9H8E8 782 aa21.03■□□□□ 0.96
CBX1-201ENST00000225603 MTMR4Q9NYA4 1195 aa21.03■□□□□ 0.96
CBX1-201ENST00000225603 CPLX1O14810 134 aa21.02■□□□□ 0.96
CBX1-201ENST00000225603 FOXD4L5Q5VV16 416 aaPredicted RBP21.02■□□□□ 0.96
CBX1-201ENST00000225603 CMTR1Q8N1G2 835 aaKnown RBP21.02■□□□□ 0.96
CBX1-201ENST00000225603 FOXD4L4Q8WXT5 416 aaPredicted RBP21.02■□□□□ 0.96
CBX1-201ENST00000225603 CHMP4CQ96CF2 233 aa21.02■□□□□ 0.96
CBX1-201ENST00000225603 CCDC17Q96LX7 622 aa21.02■□□□□ 0.96
CBX1-201ENST00000225603 ADARB2Q9NS39 739 aaKnown RBP21.02■□□□□ 0.96
CBX1-201ENST00000225603 GGA3Q9NZ52 723 aa21.02■□□□□ 0.96
CBX1-201ENST00000225603 HERC5Q9UII4 1024 aaKnown RBP21.02■□□□□ 0.96
CBX1-201ENST00000225603 DHX16O60231 1041 aaKnown RBP21.02■□□□□ 0.96
CBX1-201ENST00000225603 RCAN1P53805 252 aa21.02■□□□□ 0.96
CBX1-201ENST00000225603 PNMA1Q8ND90 353 aa21.02■□□□□ 0.96
CBX1-201ENST00000225603 DDAH1O94760 285 aa21.01■□□□□ 0.95
CBX1-201ENST00000225603 GUCY1A2P33402 732 aa21.01■□□□□ 0.95
CBX1-201ENST00000225603 KLHL40Q2TBA0 621 aa21.01■□□□□ 0.95
CBX1-201ENST00000225603 PRAMEF18Q5VWM3 479 aa21.01■□□□□ 0.95
CBX1-201ENST00000225603 PHKBQ93100 1093 aa21.01■□□□□ 0.95
CBX1-201ENST00000225603 L3MBTL3Q96JM7 780 aaPredicted RBP21.01■□□□□ 0.95
CBX1-201ENST00000225603 TAOK2Q9UL54 1235 aa21.01■□□□□ 0.95
CBX1-201ENST00000225603 ISY1Q9ULR0 285 aaKnown RBP21.01■□□□□ 0.95
CBX1-201ENST00000225603 GLTPD2A6NH11 291 aa21.01■□□□□ 0.95
CBX1-201ENST00000225603 XRCC6P12956 609 aaKnown RBP eCLIP21.01■□□□□ 0.95
CBX1-201ENST00000225603 RASGRP2Q7LDG7 609 aa21.01■□□□□ 0.95
CBX1-201ENST00000225603 TBC1D12O60347 775 aa21■□□□□ 0.95
CBX1-201ENST00000225603 MTMR7Q9Y216 660 aa21■□□□□ 0.95
CBX1-201ENST00000225603 GREB1LQ9C091 1923 aaPredicted RBP21■□□□□ 0.95
CBX1-201ENST00000225603 UBE2Q2LH0YL09 131 aa21■□□□□ 0.95
CBX1-201ENST00000225603 BRD1O95696 1058 aa21■□□□□ 0.95
CBX1-201ENST00000225603 MAP3K10Q02779 954 aa21■□□□□ 0.95
CBX1-201ENST00000225603 SEPT2Q15019 361 aa21■□□□□ 0.95
CBX1-201ENST00000225603 ABCB5Q2M3G0 1257 aa21■□□□□ 0.95
CBX1-201ENST00000225603 NBPF12Q5TAG4 269 aaPredicted RBP21■□□□□ 0.95
CBX1-201ENST00000225603 LARP1BQ659C4 914 aaKnown RBP21■□□□□ 0.95
CBX1-201ENST00000225603 CCDC82Q8N4S0 544 aa21■□□□□ 0.95
CBX1-201ENST00000225603 ZC3H4Q9UPT8 1303 aaKnown RBP20.99■□□□□ 0.95
CBX1-201ENST00000225603 STX6O43752 255 aa20.99■□□□□ 0.95
CBX1-201ENST00000225603 TOP1P11387 765 aaKnown RBP20.99■□□□□ 0.95
CBX1-201ENST00000225603 HMGN5P82970 282 aaKnown RBP20.99■□□□□ 0.95
CBX1-201ENST00000225603 LMBRD1Q9NUN5 540 aa20.99■□□□□ 0.95
CBX1-201ENST00000225603 ORC3Q9UBD5 711 aaPredicted RBP20.99■□□□□ 0.95
CBX1-201ENST00000225603 CLIP2Q9UDT6 1046 aa20.99■□□□□ 0.95
CBX1-201ENST00000225603 DDX49Q9Y6V7 483 aaKnown RBP20.99■□□□□ 0.95
CBX1-201ENST00000225603 PLEKHA8P1O95397 391 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 GH2P01242 217 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 SIAH1Q8IUQ4 282 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 APOBEC3FQ8IUX4 373 aaKnown RBP20.98■□□□□ 0.95
CBX1-201ENST00000225603 LRRC47Q8N1G4 583 aaKnown RBP20.98■□□□□ 0.95
CBX1-201ENST00000225603 TTLL1O95922 423 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 CALM1P0DP23 149 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 CALM2P0DP24 149 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 CALM3P0DP25 149 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 MRE11P49959 708 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 FOSBP53539 338 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 DLK2Q6UY11 383 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 NBPF11Q86T75 865 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 FAM184AQ8NB25 1140 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 MTMR6Q9Y217 621 aa20.98■□□□□ 0.95
CBX1-201ENST00000225603 IFNAR1P17181 557 aa20.97■□□□□ 0.95
CBX1-201ENST00000225603 CCDC196A0A1B0GTZ2 297 aa20.97■□□□□ 0.95
CBX1-201ENST00000225603 POTECB2RU33 542 aa20.97■□□□□ 0.95
CBX1-201ENST00000225603 ATP2B2Q01814 1243 aa20.97■□□□□ 0.95
CBX1-201ENST00000225603 FUT2Q10981 343 aa20.97■□□□□ 0.95
CBX1-201ENST00000225603 TMEM179Q6ZVK1 233 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms