RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 PTPRFP10586 1907 aa17.11■□□□□ 0.33
SUPT4H1-201ENST00000225504 USP17L10C9JJH3 530 aa17.11■□□□□ 0.33
SUPT4H1-201ENST00000225504 ZNF213O14771 459 aa17.11■□□□□ 0.33
SUPT4H1-201ENST00000225504 SLC3A2P08195 630 aaKnown RBP17.11■□□□□ 0.33
SUPT4H1-201ENST00000225504 FGRP09769 529 aa17.11■□□□□ 0.33
SUPT4H1-201ENST00000225504 BACE1P56817 501 aa17.11■□□□□ 0.33
SUPT4H1-201ENST00000225504 TFAP4Q01664 338 aa17.11■□□□□ 0.33
SUPT4H1-201ENST00000225504 ZYXQ15942 572 aaKnown RBP17.11■□□□□ 0.33
SUPT4H1-201ENST00000225504 SH3D19Q5HYK7 790 aa17.11■□□□□ 0.33
SUPT4H1-201ENST00000225504 EMILIN3Q9NT22 766 aa17.11■□□□□ 0.33
SUPT4H1-201ENST00000225504 HSPA8P11142 646 aaKnown RBP17.1■□□□□ 0.33
SUPT4H1-201ENST00000225504 TREML2Q5T2D2 321 aa17.1■□□□□ 0.33
SUPT4H1-201ENST00000225504 MAP4K1Q92918 833 aa17.1■□□□□ 0.33
SUPT4H1-201ENST00000225504 TBC1D2Q9BYX2 928 aa17.1■□□□□ 0.33
SUPT4H1-201ENST00000225504 LSG1Q9H089 658 aaKnown RBP17.1■□□□□ 0.33
SUPT4H1-201ENST00000225504 CTNNA3Q9UI47 895 aa17.1■□□□□ 0.33
SUPT4H1-201ENST00000225504 TAF6LQ9Y6J9 622 aa17.1■□□□□ 0.33
SUPT4H1-201ENST00000225504 IGKV6D-41A0A0C4DH26 115 aa17.09■□□□□ 0.33
SUPT4H1-201ENST00000225504 PDHXO00330 501 aa17.09■□□□□ 0.33
SUPT4H1-201ENST00000225504 ORC4O43929 436 aa17.09■□□□□ 0.33
SUPT4H1-201ENST00000225504 EEF2P13639 858 aaKnown RBP17.09■□□□□ 0.33
SUPT4H1-201ENST00000225504 LBX1P52954 281 aa17.09■□□□□ 0.33
SUPT4H1-201ENST00000225504 CRHR2Q13324 411 aa17.09■□□□□ 0.33
SUPT4H1-201ENST00000225504 RRP12Q5JTH9 1297 aaKnown RBP17.09■□□□□ 0.33
SUPT4H1-201ENST00000225504 KIAA1755Q5JYT7 1200 aa17.09■□□□□ 0.33
SUPT4H1-201ENST00000225504 AKNAD1Q5T1N1 836 aa17.09■□□□□ 0.33
SUPT4H1-201ENST00000225504 FASTKD5Q7L8L6 764 aaKnown RBP17.09■□□□□ 0.33
SUPT4H1-201ENST00000225504 ANKRD23Q86SG2 305 aa17.09■□□□□ 0.33
SUPT4H1-201ENST00000225504 ZNF287Q9HBT7 754 aa17.09■□□□□ 0.33
SUPT4H1-201ENST00000225504 C19orf81C9J6K1 198 aa17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 RANBP6O60518 1105 aaKnown RBP17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 NMT2O60551 498 aa17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 OTUD7BQ6GQQ9 843 aa17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 NEDD1Q8NHV4 660 aa17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 KIAA1683Q9H0B3 1180 aa17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 KANSL2Q9H9L4 492 aa17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 IL17RBQ9NRM6 502 aa17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 TOMM22Q9NS69 142 aa17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 SAGE1Q9NXZ1 904 aa17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 GTF3C3Q9Y5Q9 886 aa17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 RBM8AQ9Y5S9 174 aaKnown RBP17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
SUPT4H1-201ENST00000225504 CA12O43570 354 aa17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 ALDH1A1P00352 501 aa17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 CYP21A2P08686 494 aa17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 CTCFP49711 727 aaPredicted RBP17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 ATP2B2Q01814 1243 aa17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 ICA1Q05084 483 aa17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 TAF1CQ15572 869 aaPredicted RBP17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 IMMTQ16891 758 aaKnown RBP17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 MFSD6Q6ZSS7 791 aa17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 KIAA1211Q6ZU35 1233 aa17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 STAG1Q8WVM7 1258 aa17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 FEZ1Q99689 392 aa17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 ANO2Q9NQ90 1003 aa17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 NEDD4P46934 1319 aa17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 GREB1LQ9C091 1923 aaPredicted RBP17.07■□□□□ 0.32
SUPT4H1-201ENST00000225504 TSPY3P0CV98 308 aa17.06■□□□□ 0.32
SUPT4H1-201ENST00000225504 TSPY8P0CW00 308 aa17.06■□□□□ 0.32
SUPT4H1-201ENST00000225504 CYP2C8P10632 490 aa17.06■□□□□ 0.32
SUPT4H1-201ENST00000225504 USP17L2Q6R6M4 530 aa17.06■□□□□ 0.32
SUPT4H1-201ENST00000225504 PROCA1Q8NCQ7 364 aaPredicted RBP17.06■□□□□ 0.32
SUPT4H1-201ENST00000225504 CEP95Q96GE4 821 aa17.06■□□□□ 0.32
SUPT4H1-201ENST00000225504 MTMR4Q9NYA4 1195 aa17.06■□□□□ 0.32
SUPT4H1-201ENST00000225504 TMOD4Q9NZQ9 345 aa17.06■□□□□ 0.32
SUPT4H1-201ENST00000225504 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
SUPT4H1-201ENST00000225504 AGTPBP1Q9UPW5 1226 aa17.06■□□□□ 0.32
SUPT4H1-201ENST00000225504 TMX2Q9Y320 296 aa17.06■□□□□ 0.32
SUPT4H1-201ENST00000225504 TSPY2A6NKD2 308 aa17.05■□□□□ 0.32
SUPT4H1-201ENST00000225504 CASC1Q6TDU7 716 aa17.05■□□□□ 0.32
SUPT4H1-201ENST00000225504 CFHR5Q9BXR6 569 aa17.05■□□□□ 0.32
SUPT4H1-201ENST00000225504 B4E1Z4 1266 aa17.05■□□□□ 0.32
SUPT4H1-201ENST00000225504 ARHGEF10LQ9HCE6 1279 aa17.05■□□□□ 0.32
SUPT4H1-201ENST00000225504 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
SUPT4H1-201ENST00000225504 NYAP2Q9P242 653 aa17.05■□□□□ 0.32
SUPT4H1-201ENST00000225504 LAMA4Q16363 1823 aa17.04■□□□□ 0.32
SUPT4H1-201ENST00000225504 LOC285556D6RIA3 1793 aa17.04■□□□□ 0.32
SUPT4H1-201ENST00000225504 GPR25O00155 361 aa17.04■□□□□ 0.32
SUPT4H1-201ENST00000225504 NECTIN1Q15223 517 aa17.04■□□□□ 0.32
SUPT4H1-201ENST00000225504 STOX1Q6ZVD7 989 aa17.04■□□□□ 0.32
SUPT4H1-201ENST00000225504 SPICE1Q8N0Z3 855 aa17.04■□□□□ 0.32
SUPT4H1-201ENST00000225504 C12orf42Q96LP6 360 aa17.04■□□□□ 0.32
SUPT4H1-201ENST00000225504 RNF41Q9H4P4 317 aaPredicted RBP17.04■□□□□ 0.32
SUPT4H1-201ENST00000225504 ZFYVE28Q9HCC9 887 aa17.04■□□□□ 0.32
SUPT4H1-201ENST00000225504 ZSWIM5Q9P217 1185 aa17.04■□□□□ 0.32
SUPT4H1-201ENST00000225504 PLIN4Q96Q06 1357 aa17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 KDM4AO75164 1064 aa17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 PCP11498 1178 aaKnown RBP17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 VCAM1P19320 739 aa17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 USP14P54578 494 aa17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 MKL1Q969V6 931 aa17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 P2RX7Q99572 595 aaKnown RBP17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 ZKSCAN3Q9BRR0 538 aa17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 ASCC2Q9H1I8 757 aaPredicted RBP17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 VCPKMTQ9H867 229 aa17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 CPA4Q9UI42 421 aa17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 SLC45A1Q9Y2W3 748 aa17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 CASP8AP2Q9UKL3 1982 aa17.03■□□□□ 0.32
SUPT4H1-201ENST00000225504 E7EWF7 191 aa17.02■□□□□ 0.32
SUPT4H1-201ENST00000225504 SLC27A2O14975 620 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms