RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 PHF20L1A8MW92 1017 aa19.41■□□□□ 0.7
CHMP5-201ENST00000223500 CTNND1O60716 968 aaKnown RBP19.41■□□□□ 0.7
CHMP5-201ENST00000223500 ASNSP08243 561 aa19.41■□□□□ 0.7
CHMP5-201ENST00000223500 CATIPQ7Z7H3 387 aa19.41■□□□□ 0.7
CHMP5-201ENST00000223500 CHMP4CQ96CF2 233 aa19.41■□□□□ 0.7
CHMP5-201ENST00000223500 TMX3Q96JJ7 454 aa19.41■□□□□ 0.7
CHMP5-201ENST00000223500 KAT14Q9H8E8 782 aa19.41■□□□□ 0.7
CHMP5-201ENST00000223500 MTMR4Q9NYA4 1195 aa19.41■□□□□ 0.7
CHMP5-201ENST00000223500 ZNF112Q9UJU3 913 aa19.41■□□□□ 0.7
CHMP5-201ENST00000223500 TPCN1Q9ULQ1 816 aa19.41■□□□□ 0.7
CHMP5-201ENST00000223500 TTLL1O95922 423 aa19.4■□□□□ 0.7
CHMP5-201ENST00000223500 RAB3GAP1Q15042 981 aa19.4■□□□□ 0.7
CHMP5-201ENST00000223500 ATAD5Q96QE3 1844 aa19.4■□□□□ 0.7
CHMP5-201ENST00000223500 WRNIP1Q96S55 665 aa19.4■□□□□ 0.7
CHMP5-201ENST00000223500 ZBTB21Q9ULJ3 1066 aa19.4■□□□□ 0.7
CHMP5-201ENST00000223500 MYH4Q9Y623 1939 aa19.39■□□□□ 0.69
CHMP5-201ENST00000223500 ZBTB43O43298 467 aa19.39■□□□□ 0.69
CHMP5-201ENST00000223500 TOP1P11387 765 aaKnown RBP19.39■□□□□ 0.69
CHMP5-201ENST00000223500 NOVP48745 357 aa19.39■□□□□ 0.69
CHMP5-201ENST00000223500 RRP1BQ14684 758 aaKnown RBP19.39■□□□□ 0.69
CHMP5-201ENST00000223500 SEPT2Q15019 361 aa19.39■□□□□ 0.69
CHMP5-201ENST00000223500 RCSD1Q6JBY9 416 aa19.39■□□□□ 0.69
CHMP5-201ENST00000223500 CHADLQ6NUI6 762 aa19.39■□□□□ 0.69
CHMP5-201ENST00000223500 IPO9Q96P70 1041 aaKnown RBP19.39■□□□□ 0.69
CHMP5-201ENST00000223500 SLKQ9H2G2 1235 aaPredicted RBP19.39■□□□□ 0.69
CHMP5-201ENST00000223500 SSC5DA1L4H1 1573 aa19.38■□□□□ 0.69
CHMP5-201ENST00000223500 GOLGA8BA8MQT2 603 aa19.38■□□□□ 0.69
CHMP5-201ENST00000223500 IREB2P48200 963 aaKnown RBP19.38■□□□□ 0.69
CHMP5-201ENST00000223500 ATP2B2Q01814 1243 aa19.38■□□□□ 0.69
CHMP5-201ENST00000223500 ICA1Q05084 483 aa19.38■□□□□ 0.69
CHMP5-201ENST00000223500 ME3Q16798 604 aa19.38■□□□□ 0.69
CHMP5-201ENST00000223500 DLK2Q6UY11 383 aa19.38■□□□□ 0.69
CHMP5-201ENST00000223500 KLRG1Q96E93 195 aa19.38■□□□□ 0.69
CHMP5-201ENST00000223500 TMEM47Q9BQJ4 181 aa19.38■□□□□ 0.69
CHMP5-201ENST00000223500 SENP2Q9HC62 589 aa19.38■□□□□ 0.69
CHMP5-201ENST00000223500 NYAP2Q9P242 653 aa19.38■□□□□ 0.69
CHMP5-201ENST00000223500 CLIP2Q9UDT6 1046 aa19.38■□□□□ 0.69
CHMP5-201ENST00000223500 BRPF3Q9ULD4 1205 aa19.38■□□□□ 0.69
CHMP5-201ENST00000223500 USP2O75604 605 aaPredicted RBP19.37■□□□□ 0.69
CHMP5-201ENST00000223500 HSP90AA1P07900 732 aaKnown RBP19.37■□□□□ 0.69
CHMP5-201ENST00000223500 CALM1P0DP23 149 aa19.37■□□□□ 0.69
CHMP5-201ENST00000223500 CALM2P0DP24 149 aa19.37■□□□□ 0.69
CHMP5-201ENST00000223500 CALM3P0DP25 149 aa19.37■□□□□ 0.69
CHMP5-201ENST00000223500 PDIA3P30101 505 aaKnown RBP19.37■□□□□ 0.69
CHMP5-201ENST00000223500 RCAN1P53805 252 aa19.37■□□□□ 0.69
CHMP5-201ENST00000223500 PRKG1Q13976 671 aa19.37■□□□□ 0.69
CHMP5-201ENST00000223500 TTLL12Q14166 644 aaPredicted RBP19.37■□□□□ 0.69
CHMP5-201ENST00000223500 APOA5Q6Q788 366 aa19.37■□□□□ 0.69
CHMP5-201ENST00000223500 ZNF654Q8IZM8 581 aa19.37■□□□□ 0.69
CHMP5-201ENST00000223500 ARHGEF10LQ9HCE6 1279 aa19.37■□□□□ 0.69
CHMP5-201ENST00000223500 PICK1Q9NRD5 415 aa19.37■□□□□ 0.69
CHMP5-201ENST00000223500 DOCK1Q14185 1865 aa19.37■□□□□ 0.69
CHMP5-201ENST00000223500 PFKFB2O60825 505 aa19.36■□□□□ 0.69
CHMP5-201ENST00000223500 DDAH1O94760 285 aa19.36■□□□□ 0.69
CHMP5-201ENST00000223500 INPP5BP32019 993 aa19.36■□□□□ 0.69
CHMP5-201ENST00000223500 GUCY1A2P33402 732 aa19.36■□□□□ 0.69
CHMP5-201ENST00000223500 MAP3K9P80192 1104 aa19.36■□□□□ 0.69
CHMP5-201ENST00000223500 STK3Q13188 491 aa19.36■□□□□ 0.69
CHMP5-201ENST00000223500 SHROOM1Q2M3G4 852 aaPredicted RBP19.36■□□□□ 0.69
CHMP5-201ENST00000223500 ARMC9Q7Z3E5 817 aa19.36■□□□□ 0.69
CHMP5-201ENST00000223500 SCYL3Q8IZE3 742 aa19.36■□□□□ 0.69
CHMP5-201ENST00000223500 PNMA1Q8ND90 353 aa19.36■□□□□ 0.69
CHMP5-201ENST00000223500 EEF2P13639 858 aaKnown RBP19.35■□□□□ 0.69
CHMP5-201ENST00000223500 METAP2P50579 478 aaKnown RBP eCLIP19.35■□□□□ 0.69
CHMP5-201ENST00000223500 JAG1P78504 1218 aa19.35■□□□□ 0.69
CHMP5-201ENST00000223500 PPP2R5BQ15173 497 aa19.35■□□□□ 0.69
CHMP5-201ENST00000223500 MICU3Q86XE3 530 aa19.35■□□□□ 0.69
CHMP5-201ENST00000223500 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.35■□□□□ 0.69
CHMP5-201ENST00000223500 NUP133Q8WUM0 1156 aa19.35■□□□□ 0.69
CHMP5-201ENST00000223500 MKL1Q969V6 931 aa19.35■□□□□ 0.69
CHMP5-201ENST00000223500 CSADQ9Y600 493 aa19.35■□□□□ 0.69
CHMP5-201ENST00000223500 GOLGA8AA7E2F4 631 aa19.35■□□□□ 0.69
CHMP5-201ENST00000223500 TRAF5O00463 557 aa19.35■□□□□ 0.69
CHMP5-201ENST00000223500 DHX16O60231 1041 aaKnown RBP19.35■□□□□ 0.69
CHMP5-201ENST00000223500 LARGE1O95461 756 aa19.35■□□□□ 0.69
CHMP5-201ENST00000223500 NOL9Q5SY16 702 aaKnown RBP19.35■□□□□ 0.69
CHMP5-201ENST00000223500 GTF3C6Q969F1 213 aa19.35■□□□□ 0.69
CHMP5-201ENST00000223500 SH2D4AQ9H788 454 aa19.35■□□□□ 0.69
CHMP5-201ENST00000223500 SYNPO2Q9UMS6 1093 aa19.35■□□□□ 0.69
CHMP5-201ENST00000223500 CCDC196A0A1B0GTZ2 297 aa19.34■□□□□ 0.69
CHMP5-201ENST00000223500 USP17L5A8MUK1 530 aa19.34■□□□□ 0.69
CHMP5-201ENST00000223500 CCT2P78371 535 aaKnown RBP19.34■□□□□ 0.69
CHMP5-201ENST00000223500 CUL4AQ13619 759 aa19.34■□□□□ 0.69
CHMP5-201ENST00000223500 MAP3K11Q16584 847 aa19.34■□□□□ 0.69
CHMP5-201ENST00000223500 RTN1Q16799 776 aa19.34■□□□□ 0.69
CHMP5-201ENST00000223500 CPLX2Q6PUV4 134 aaKnown RBP19.34■□□□□ 0.69
CHMP5-201ENST00000223500 CLEC10AQ8IUN9 316 aa19.34■□□□□ 0.69
CHMP5-201ENST00000223500 CCDC83Q8IWF9 413 aa19.34■□□□□ 0.69
CHMP5-201ENST00000223500 NECAB1Q8N987 351 aa19.34■□□□□ 0.69
CHMP5-201ENST00000223500 CTCFLQ8NI51 663 aaPredicted RBP19.34■□□□□ 0.69
CHMP5-201ENST00000223500 ZKSCAN4Q969J2 545 aaPredicted RBP19.34■□□□□ 0.69
CHMP5-201ENST00000223500 MAP3K14Q99558 947 aa19.34■□□□□ 0.69
CHMP5-201ENST00000223500 ZNF408Q9H9D4 720 aa19.34■□□□□ 0.69
CHMP5-201ENST00000223500 FZD1Q9UP38 647 aa19.34■□□□□ 0.69
CHMP5-201ENST00000223500 YY1P25490 414 aa19.33■□□□□ 0.68
CHMP5-201ENST00000223500 KIF5BP33176 963 aa19.33■□□□□ 0.68
CHMP5-201ENST00000223500 FKBP1BP68106 108 aa19.33■□□□□ 0.68
CHMP5-201ENST00000223500 SCRN1Q12765 414 aa19.33■□□□□ 0.68
CHMP5-201ENST00000223500 TROAPQ12815 778 aa19.33■□□□□ 0.68
CHMP5-201ENST00000223500 RAB11FIP4Q86YS3 637 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms