RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 ARMCX5Q6P1M9 558 aa24.06■■□□□ 1.44
CCDC130-201ENST00000221554 FOXP4Q8IVH2 680 aaPredicted RBP24.06■■□□□ 1.44
CCDC130-201ENST00000221554 CTCFLQ8NI51 663 aaPredicted RBP24.06■■□□□ 1.44
CCDC130-201ENST00000221554 USP17L12C9JPN9 530 aa24.05■■□□□ 1.44
CCDC130-201ENST00000221554 USP17L21D6R901 530 aa24.05■■□□□ 1.44
CCDC130-201ENST00000221554 MECOMQ03112 1051 aa24.05■■□□□ 1.44
CCDC130-201ENST00000221554 CCDC178Q5BJE1 867 aa24.05■■□□□ 1.44
CCDC130-201ENST00000221554 ISM2Q6H9L7 571 aa24.05■■□□□ 1.44
CCDC130-201ENST00000221554 NBPF5PQ86XG9 351 aaPredicted RBP24.05■■□□□ 1.44
CCDC130-201ENST00000221554 MAN1B1Q9UKM7 699 aa24.05■■□□□ 1.44
CCDC130-201ENST00000221554 ERCC5P28715 1186 aaPredicted RBP24.04■■□□□ 1.44
CCDC130-201ENST00000221554 TRAPPC10P48553 1259 aa24.04■■□□□ 1.44
CCDC130-201ENST00000221554 MORC3Q14149 939 aa24.04■■□□□ 1.44
CCDC130-201ENST00000221554 CFAP100Q494V2 611 aa24.04■■□□□ 1.44
CCDC130-201ENST00000221554 TMTC3Q6ZXV5 915 aa24.04■■□□□ 1.44
CCDC130-201ENST00000221554 SERTAD1Q9UHV2 236 aa24.04■■□□□ 1.44
CCDC130-201ENST00000221554 MYH6P13533 1939 aa24.04■■□□□ 1.44
CCDC130-201ENST00000221554 FCHSD1Q86WN1 690 aa24.03■■□□□ 1.44
CCDC130-201ENST00000221554 VSTM4Q8IW00 320 aa24.03■■□□□ 1.44
CCDC130-201ENST00000221554 CMTR1Q8N1G2 835 aaKnown RBP24.03■■□□□ 1.44
CCDC130-201ENST00000221554 PDCL2Q8N4E4 241 aa24.03■■□□□ 1.44
CCDC130-201ENST00000221554 SPATA20Q8TB22 786 aa24.03■■□□□ 1.44
CCDC130-201ENST00000221554 V9GY48 417 aaPredicted RBP24.03■■□□□ 1.44
CCDC130-201ENST00000221554 COL4A1P02462 1669 aa24.03■■□□□ 1.44
CCDC130-201ENST00000221554 KIF5BP33176 963 aa24.03■■□□□ 1.44
CCDC130-201ENST00000221554 BICDL1Q6ZP65 573 aa24.03■■□□□ 1.44
CCDC130-201ENST00000221554 OXER1Q8TDS5 423 aa24.03■■□□□ 1.44
CCDC130-201ENST00000221554 DCP1AQ9NPI6 582 aaPredicted RBP24.03■■□□□ 1.44
CCDC130-201ENST00000221554 COL24A1Q17RW2 1714 aa24.02■■□□□ 1.44
CCDC130-201ENST00000221554 MAST2Q6P0Q8 1798 aa24.02■■□□□ 1.44
CCDC130-201ENST00000221554 CASZ1Q86V15 1759 aa24.02■■□□□ 1.44
CCDC130-201ENST00000221554 TOP1P11387 765 aaKnown RBP24.02■■□□□ 1.44
CCDC130-201ENST00000221554 ZNF384Q8TF68 577 aa24.02■■□□□ 1.44
CCDC130-201ENST00000221554 CSRNP2Q9H175 543 aa24.02■■□□□ 1.44
CCDC130-201ENST00000221554 USP27XA6NNY8 438 aa24.01■■□□□ 1.43
CCDC130-201ENST00000221554 ACTN4O43707 911 aaKnown RBP24.01■■□□□ 1.43
CCDC130-201ENST00000221554 ATP1A3P13637 1013 aa24.01■■□□□ 1.43
CCDC130-201ENST00000221554 ZNF592Q92610 1267 aa24.01■■□□□ 1.43
CCDC130-201ENST00000221554 FANCLQ9NW38 375 aa24.01■■□□□ 1.43
CCDC130-201ENST00000221554 VPS54Q9P1Q0 977 aa24.01■■□□□ 1.43
CCDC130-201ENST00000221554 SLFN14P0C7P3 912 aa24■■□□□ 1.43
CCDC130-201ENST00000221554 SPECC1Q5M775 1068 aa24■■□□□ 1.43
CCDC130-201ENST00000221554 E4F1Q66K89 784 aaPredicted RBP24■■□□□ 1.43
CCDC130-201ENST00000221554 CERS3Q8IU89 383 aa24■■□□□ 1.43
CCDC130-201ENST00000221554 TSC1Q92574 1164 aa24■■□□□ 1.43
CCDC130-201ENST00000221554 TMX1Q9H3N1 280 aa24■■□□□ 1.43
CCDC130-201ENST00000221554 TRMT1Q9NXH9 659 aaKnown RBP24■■□□□ 1.43
CCDC130-201ENST00000221554 RTCBQ9Y3I0 505 aaKnown RBP24■■□□□ 1.43
CCDC130-201ENST00000221554 MYH2Q9UKX2 1941 aa23.99■■□□□ 1.43
CCDC130-201ENST00000221554 MYH13Q9UKX3 1938 aa23.99■■□□□ 1.43
CCDC130-201ENST00000221554 BTAF1O14981 1849 aa23.99■■□□□ 1.43
CCDC130-201ENST00000221554 CALML3P27482 149 aa23.99■■□□□ 1.43
CCDC130-201ENST00000221554 GSTO1P78417 241 aa23.99■■□□□ 1.43
CCDC130-201ENST00000221554 PTF1AQ7RTS3 328 aa23.99■■□□□ 1.43
CCDC130-201ENST00000221554 FAM177A1Q8N128 213 aaPredicted RBP23.99■■□□□ 1.43
CCDC130-201ENST00000221554 WDR66Q8TBY9 1149 aa23.99■■□□□ 1.43
CCDC130-201ENST00000221554 CGNQ9P2M7 1197 aaKnown RBP23.99■■□□□ 1.43
CCDC130-201ENST00000221554 LEMD3Q9Y2U8 911 aa23.99■■□□□ 1.43
CCDC130-201ENST00000221554 LAMB1P07942 1786 aa23.99■■□□□ 1.43
CCDC130-201ENST00000221554 NHSQ6T4R5 1651 aa23.99■■□□□ 1.43
CCDC130-201ENST00000221554 CDK11BP21127 795 aaKnown RBP23.98■■□□□ 1.43
CCDC130-201ENST00000221554 BMP6P22004 513 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 PLCD1P51178 756 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 GRIN1Q05586 938 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 TNFRSF25Q93038 417 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 PPP1R13BQ96KQ4 1090 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 GSDMAQ96QA5 445 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 SH3GLB2Q9NR46 395 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 CCDC88AQ3V6T2 1871 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 CNTNAP5Q8WYK1 1306 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 CYP2D7A0A087X1C5 515 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 PLEKHA8P1O95397 391 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 ZNF18P17022 549 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 GNAQP50148 359 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 TTC38Q5R3I4 469 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 DGKHQ86XP1 1220 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 AMOTL1Q8IY63 956 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 ANKS1AQ92625 1134 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 ERO1AQ96HE7 468 aa23.98■■□□□ 1.43
CCDC130-201ENST00000221554 BAZ2AQ9UIF9 1905 aaKnown RBP23.97■■□□□ 1.43
CCDC130-201ENST00000221554 KIAA1551Q9HCM1 1747 aa23.97■■□□□ 1.43
CCDC130-201ENST00000221554 ZSCAN12O43309 604 aa23.97■■□□□ 1.43
CCDC130-201ENST00000221554 SCG2P13521 617 aa23.97■■□□□ 1.43
CCDC130-201ENST00000221554 ATP2B1P20020 1258 aa23.97■■□□□ 1.43
CCDC130-201ENST00000221554 NCBP1Q09161 790 aaKnown RBP23.97■■□□□ 1.43
CCDC130-201ENST00000221554 SH3RF1Q7Z6J0 888 aa23.97■■□□□ 1.43
CCDC130-201ENST00000221554 DZIP1Q86YF9 867 aaKnown RBP23.97■■□□□ 1.43
CCDC130-201ENST00000221554 GOLGA6L9A6NEM1 432 aa23.96■■□□□ 1.43
CCDC130-201ENST00000221554 WTIPA6NIX2 430 aaPredicted RBP23.96■■□□□ 1.43
CCDC130-201ENST00000221554 TSPY2A6NKD2 308 aa23.96■■□□□ 1.43
CCDC130-201ENST00000221554 FOXN1O15353 648 aa23.96■■□□□ 1.43
CCDC130-201ENST00000221554 PRDM1O75626 825 aa23.96■■□□□ 1.43
CCDC130-201ENST00000221554 PFKFB3Q16875 520 aaPredicted RBP23.96■■□□□ 1.43
CCDC130-201ENST00000221554 FEZ1Q99689 392 aa23.96■■□□□ 1.43
CCDC130-201ENST00000221554 NFE2L3Q9Y4A8 694 aa23.96■■□□□ 1.43
CCDC130-201ENST00000221554 TNS1Q9HBL0 1735 aaKnown RBP23.96■■□□□ 1.43
CCDC130-201ENST00000221554 ATP2C1P98194 919 aaPredicted RBP23.96■■□□□ 1.43
CCDC130-201ENST00000221554 SRBD1Q8N5C6 995 aaKnown RBP23.96■■□□□ 1.43
CCDC130-201ENST00000221554 DPF2Q92785 391 aa23.96■■□□□ 1.43
CCDC130-201ENST00000221554 TAF1P21675 1872 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms