RNA–Protein interactions for RNA: ENST00000217999.2

RHOXF1-201, Transcript of Rhox homeobox family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1-201ENST00000217999 USP17L13C9JLJ4 530 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 USP17L11C9JVI0 530 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 USP17L18D6R9N7 530 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 USP17L22D6RA61 530 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 USP17L17D6RBQ6 530 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 USP17L19D6RCP7 530 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 USP17L20D6RJB6 530 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 CCL5P13501 91 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 MAPK4P31152 587 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 USP17L24Q0WX57 530 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 RNF208Q9H0X6 261 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 ARHGEF10LQ9HCE6 1279 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 EMILIN3Q9NT22 766 aa17.23■□□□□ 0.35
RHOXF1-201ENST00000217999 INHAP05111 366 aa17.22■□□□□ 0.35
RHOXF1-201ENST00000217999 CAPN2P17655 700 aa17.22■□□□□ 0.35
RHOXF1-201ENST00000217999 VCAM1P19320 739 aa17.22■□□□□ 0.35
RHOXF1-201ENST00000217999 CCNA1P78396 465 aa17.22■□□□□ 0.35
RHOXF1-201ENST00000217999 MTFR1Q15390 333 aa17.22■□□□□ 0.35
RHOXF1-201ENST00000217999 CCDC17Q96LX7 622 aa17.22■□□□□ 0.35
RHOXF1-201ENST00000217999 P2RX7Q99572 595 aaKnown RBP17.22■□□□□ 0.35
RHOXF1-201ENST00000217999 PAGR1Q9BTK6 254 aa17.22■□□□□ 0.35
RHOXF1-201ENST00000217999 PRKAB2O43741 272 aa17.21■□□□□ 0.35
RHOXF1-201ENST00000217999 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
RHOXF1-201ENST00000217999 HMGCRP04035 888 aa17.21■□□□□ 0.35
RHOXF1-201ENST00000217999 GJB1P08034 283 aa17.21■□□□□ 0.35
RHOXF1-201ENST00000217999 ELNP15502 786 aa17.21■□□□□ 0.35
RHOXF1-201ENST00000217999 ERVK-9P63128 1117 aa17.21■□□□□ 0.35
RHOXF1-201ENST00000217999 ERVK-24P63145 666 aa17.21■□□□□ 0.35
RHOXF1-201ENST00000217999 AAMPQ13685 434 aa17.21■□□□□ 0.35
RHOXF1-201ENST00000217999 SEPT2Q15019 361 aa17.21■□□□□ 0.35
RHOXF1-201ENST00000217999 APPBP2Q92624 585 aa17.21■□□□□ 0.35
RHOXF1-201ENST00000217999 RNF113AO15541 343 aaKnown RBP17.2■□□□□ 0.34
RHOXF1-201ENST00000217999 CYP2D6P10635 497 aa17.2■□□□□ 0.34
RHOXF1-201ENST00000217999 GNAT2P19087 354 aa17.2■□□□□ 0.34
RHOXF1-201ENST00000217999 GJA8P48165 433 aa17.2■□□□□ 0.34
RHOXF1-201ENST00000217999 ICA1Q05084 483 aa17.2■□□□□ 0.34
RHOXF1-201ENST00000217999 C12orf60Q5U649 245 aa17.2■□□□□ 0.34
RHOXF1-201ENST00000217999 TSHZ3Q63HK5 1081 aa17.2■□□□□ 0.34
RHOXF1-201ENST00000217999 GCC1Q96CN9 775 aa17.2■□□□□ 0.34
RHOXF1-201ENST00000217999 NUDT12Q9BQG2 462 aa17.2■□□□□ 0.34
RHOXF1-201ENST00000217999 PUS7LQ9H0K6 701 aaKnown RBP17.2■□□□□ 0.34
RHOXF1-201ENST00000217999 RABGAP1Q9Y3P9 1069 aa17.2■□□□□ 0.34
RHOXF1-201ENST00000217999 PCDHB15Q9Y5E8 787 aa17.2■□□□□ 0.34
RHOXF1-201ENST00000217999 USP17L12C9JPN9 530 aa17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 USP17L21D6R901 530 aa17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 MX1P20591 662 aa17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 SLFNL1Q499Z3 407 aa17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 GIMAP6Q6P9H5 292 aa17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 C16orf86Q6ZW13 317 aa17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 TRMT44Q8IYL2 757 aaKnown RBP17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 SLC44A5Q8NCS7 719 aa17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 ACER1Q8TDN7 264 aa17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 LPAR1Q92633 364 aa17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 CRBNQ96SW2 442 aa17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 FSD1Q9BTV5 496 aa17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 TANGO6Q9C0B7 1094 aa17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 RPAP3Q9H6T3 665 aaPredicted RBP17.19■□□□□ 0.34
RHOXF1-201ENST00000217999 DOCK3Q8IZD9 2030 aa17.18■□□□□ 0.34
RHOXF1-201ENST00000217999 GUCY1A2P33402 732 aa17.18■□□□□ 0.34
RHOXF1-201ENST00000217999 CDK8P49336 464 aa17.18■□□□□ 0.34
RHOXF1-201ENST00000217999 CATSPERGQ6ZRH7 1159 aa17.18■□□□□ 0.34
RHOXF1-201ENST00000217999 U2AF1L4Q8WU68 220 aaKnown RBP17.18■□□□□ 0.34
RHOXF1-201ENST00000217999 DYNLL2Q96FJ2 89 aa17.18■□□□□ 0.34
RHOXF1-201ENST00000217999 UNC93B1Q9H1C4 597 aa17.18■□□□□ 0.34
RHOXF1-201ENST00000217999 ZNF287Q9HBT7 754 aa17.18■□□□□ 0.34
RHOXF1-201ENST00000217999 TXNRD2Q9NNW7 524 aa17.18■□□□□ 0.34
RHOXF1-201ENST00000217999 RGS2P41220 211 aa17.17■□□□□ 0.34
RHOXF1-201ENST00000217999 TDO2P48775 406 aa17.17■□□□□ 0.34
RHOXF1-201ENST00000217999 LBX2Q6XYB7 198 aa17.17■□□□□ 0.34
RHOXF1-201ENST00000217999 PLEKHH3Q7Z736 793 aa17.17■□□□□ 0.34
RHOXF1-201ENST00000217999 SHISA4Q96DD7 197 aa17.17■□□□□ 0.34
RHOXF1-201ENST00000217999 STRBPQ96SI9 672 aaKnown RBP17.17■□□□□ 0.34
RHOXF1-201ENST00000217999 HTATIP2Q9BUP3 242 aa17.17■□□□□ 0.34
RHOXF1-201ENST00000217999 RBPJLQ9UBG7 517 aa17.17■□□□□ 0.34
RHOXF1-201ENST00000217999 IVNS1ABPQ9Y6Y0 642 aa17.17■□□□□ 0.34
RHOXF1-201ENST00000217999 ROBO3Q96MS0 1386 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 GPAA1O43292 621 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 CHGBP05060 677 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 AKR1B1P15121 316 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 ZKSCAN1P17029 563 aaPredicted RBP17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 EVX2Q03828 476 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 SBK1Q52WX2 424 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 WDR78Q5VTH9 848 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 CTR9Q6PD62 1173 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 GPR142Q7Z601 462 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 APBA2Q99767 749 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 NACAP1Q9BZK3 213 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 PLXNB2O15031 1838 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 A0A0G2JMZ2 1700 aa17.16■□□□□ 0.34
RHOXF1-201ENST00000217999 BRCA2P51587 3418 aa17.15■□□□□ 0.34
RHOXF1-201ENST00000217999 CYP2D7A0A087X1C5 515 aa17.15■□□□□ 0.34
RHOXF1-201ENST00000217999 SPDYE16A6NNV3 312 aaPredicted RBP17.15■□□□□ 0.34
RHOXF1-201ENST00000217999 FARP2O94887 1054 aaPredicted RBP17.15■□□□□ 0.34
RHOXF1-201ENST00000217999 APPP05067 770 aa17.15■□□□□ 0.34
RHOXF1-201ENST00000217999 XRCC5P13010 732 aaKnown RBP17.15■□□□□ 0.34
RHOXF1-201ENST00000217999 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
RHOXF1-201ENST00000217999 MB21D1Q8N884 522 aa17.15■□□□□ 0.34
RHOXF1-201ENST00000217999 PI4K2BQ8TCG2 481 aa17.15■□□□□ 0.34
RHOXF1-201ENST00000217999 OSBP2Q969R2 916 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms