RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 KLHL33A6NCF5 533 aa16.77■□□□□ 0.27
TMEM38A-201ENST00000187762 MRPL12P52815 198 aaKnown RBP16.77■□□□□ 0.27
TMEM38A-201ENST00000187762 FAM43BQ6ZT52 329 aaPredicted RBP16.77■□□□□ 0.27
TMEM38A-201ENST00000187762 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.77■□□□□ 0.27
TMEM38A-201ENST00000187762 OTUD6BQ8N6M0 293 aa16.77■□□□□ 0.27
TMEM38A-201ENST00000187762 TOGARAM1Q9Y4F4 1720 aa16.77■□□□□ 0.27
TMEM38A-201ENST00000187762 ECM2O94769 699 aaPredicted RBP16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 KIAA0754O94854 1291 aa16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 ZAP70P43403 619 aa16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 HSPA2P54652 639 aa16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 GNGT1P63211 74 aa16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 ATP2B2Q01814 1243 aa16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 AKAP17AQ02040 695 aaKnown RBP16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 TCIRG1Q13488 830 aa16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 RAD9BQ6WBX8 426 aa16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 TRIM6Q9C030 488 aaPredicted RBP16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 XIRP1Q702N8 1843 aaKnown RBP16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 AGPSO00116 658 aa16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 PFKFB1P16118 471 aa16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 NKX1-1Q15270 411 aaPredicted RBP16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 HSP90AA4PQ58FG1 418 aa16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 CCDC148Q8NFR7 591 aa16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 ZNF274Q96GC6 653 aaPredicted RBP16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 NAPGQ99747 312 aaPredicted RBP16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 PUS7LQ9H0K6 701 aaKnown RBP16.76■□□□□ 0.27
TMEM38A-201ENST00000187762 TNS2Q63HR2 1409 aa16.75■□□□□ 0.27
TMEM38A-201ENST00000187762 SPTLC2O15270 562 aa16.75■□□□□ 0.27
TMEM38A-201ENST00000187762 B4GALNT4Q76KP1 1039 aa16.75■□□□□ 0.27
TMEM38A-201ENST00000187762 CRACR2AQ9BSW2 395 aa16.75■□□□□ 0.27
TMEM38A-201ENST00000187762 GJB4Q9NTQ9 266 aa16.75■□□□□ 0.27
TMEM38A-201ENST00000187762 FGAP02671 866 aa16.75■□□□□ 0.27
TMEM38A-201ENST00000187762 DNAJC10Q8IXB1 793 aa16.75■□□□□ 0.27
TMEM38A-201ENST00000187762 MEFVO15553 781 aaPredicted RBP16.74■□□□□ 0.27
TMEM38A-201ENST00000187762 YEATS4O95619 227 aa16.74■□□□□ 0.27
TMEM38A-201ENST00000187762 USP14P54578 494 aa16.74■□□□□ 0.27
TMEM38A-201ENST00000187762 OLFM4Q6UX06 510 aa16.74■□□□□ 0.27
TMEM38A-201ENST00000187762 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.74■□□□□ 0.27
TMEM38A-201ENST00000187762 KLC4Q9NSK0 619 aa16.74■□□□□ 0.27
TMEM38A-201ENST00000187762 MYH7P12883 1935 aa16.74■□□□□ 0.27
TMEM38A-201ENST00000187762 GDAP1L1Q96MZ0 367 aa16.74■□□□□ 0.27
TMEM38A-201ENST00000187762 CDC5LQ99459 802 aaKnown RBP16.74■□□□□ 0.27
TMEM38A-201ENST00000187762 ASAP1Q9ULH1 1129 aa16.74■□□□□ 0.27
TMEM38A-201ENST00000187762 RTN2O75298 545 aa16.73■□□□□ 0.27
TMEM38A-201ENST00000187762 MCM3P25205 808 aa16.73■□□□□ 0.27
TMEM38A-201ENST00000187762 TBC1D8BQ0IIM8 1120 aa16.73■□□□□ 0.27
TMEM38A-201ENST00000187762 NCAPH2Q6IBW4 605 aa16.73■□□□□ 0.27
TMEM38A-201ENST00000187762 DENND2AQ9ULE3 1009 aa16.73■□□□□ 0.27
TMEM38A-201ENST00000187762 MYO5AQ9Y4I1 1855 aaKnown RBP16.73■□□□□ 0.27
TMEM38A-201ENST00000187762 KLF18A0A0U1RQI7 1052 aa16.73■□□□□ 0.27
TMEM38A-201ENST00000187762 PRC1O43663 620 aa16.73■□□□□ 0.27
TMEM38A-201ENST00000187762 IMMTQ16891 758 aaKnown RBP16.73■□□□□ 0.27
TMEM38A-201ENST00000187762 PANX2Q96RD6 677 aa16.73■□□□□ 0.27
TMEM38A-201ENST00000187762 POLR3EQ9NVU0 708 aa16.73■□□□□ 0.27
TMEM38A-201ENST00000187762 MROH7-TTC4A0A0A0MT08 1334 aa16.73■□□□□ 0.27
TMEM38A-201ENST00000187762 AKR1B15C9JRZ8 316 aaPredicted RBP16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 POLR3DP05423 398 aaPredicted RBP16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 IBSPP21815 317 aaPredicted RBP16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 CMA1P23946 247 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 ARHGAP25P42331 645 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 ANTXR2P58335 489 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 PNOCQ13519 176 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 NKX2-3Q8TAU0 364 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 TMOD3Q9NYL9 352 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 RIC1Q4ADV7 1423 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 KAT6BQ8WYB5 2073 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 GOLGA8BA8MQT2 603 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 ACTN3Q08043 901 aaPredicted RBP16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 IFIT5Q13325 482 aaKnown RBP16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 CEP85LQ5SZL2 805 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 SPATS2Q86XZ4 545 aaKnown RBP16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 CALR3Q96L12 384 aaKnown RBP16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 SH3GL2Q99962 352 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 MYO6Q9UM54 1294 aa16.72■□□□□ 0.27
TMEM38A-201ENST00000187762 NDUFAB1O14561 156 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 SMTNP53814 917 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 HLFQ16534 295 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 RASGRP2Q7LDG7 609 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 MB21D2Q8IYB1 491 aaPredicted RBP16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 HPS5Q9UPZ3 1129 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 AKAP11Q9UKA4 1901 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 GPAA1O43292 621 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 PCCAP05165 728 aaPredicted RBP16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 CCNHP51946 323 aaPredicted RBP16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 CLNS1AP54105 237 aaKnown RBP16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 AMPD2Q01433 879 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 PDE4BQ07343 736 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 GRIK3Q13003 919 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 SEMA3FQ13275 785 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 KIF6Q6ZMV9 814 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 APPBP2Q92624 585 aa16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 NAA15Q9BXJ9 866 aaKnown RBP16.71■□□□□ 0.27
TMEM38A-201ENST00000187762 GOLGA6BA6NDN3 693 aa16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 RASSF9O75901 435 aa16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 MCAMP43121 646 aa16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 SYKP43405 635 aa16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 METTL24Q5JXM2 366 aa16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 TICAM2Q86XR7 235 aa16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 SELENOOQ9BVL4 669 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms