RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 A0A1B0GVL5 298 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 NEMFO60524 1076 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 PARP1P09874 1014 aaKnown RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 CD19P15391 556 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 HADHQ16836 314 aaKnown RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 TEX9Q8N6V9 391 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 SCYL1Q96KG9 808 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 MMS19Q96T76 1030 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ARHGDIAP52565 204 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ASIC1P78348 528 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 VWA3BQ502W6 1294 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 UBL4BQ8N7F7 174 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 PAWRQ96IZ0 340 aaKnown RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 NDEL1Q9GZM8 345 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 SH2B1Q9NRF2 756 aaPredicted RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 ARHGEF35A5YM69 484 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 POLR2DO15514 142 aaKnown RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 PPIP5K2O43314 1243 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ESRRBO95718 433 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ARPP19P56211 112 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 DRP2Q13474 957 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 CCDC62Q6P9F0 684 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 RSRC2Q7L4I2 434 aaKnown RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 ZFP42Q96MM3 310 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 FHOD3Q2V2M9 1422 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 EFCAB8A8MWE9 144 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ZNF365Q70YC5 407 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 INTS8Q75QN2 995 aaKnown RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 HDAC11Q96DB2 347 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 IFNLR1Q8IU57 520 aaPredicted RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 SNTNA6NMZ2 147 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 CHMP2AO43633 222 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 GTF2H3Q13889 308 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 CC2D1AQ6P1N0 951 aaPredicted RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 RNF139Q8WU17 664 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 EPAS1Q99814 870 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 IFIH1Q9BYX4 1025 aaKnown RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 MCM9Q9NXL9 1143 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 PAXBP1Q9Y5B6 917 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 SUPT3HB4E1H0 165 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ARHGEF16Q5VV41 709 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 NUP58Q9BVL2 599 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 GGA1Q9UJY5 639 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 USP47Q96K76 1375 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 CCDC84Q86UT8 332 aaPredicted RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 GPBP1L1Q9HC44 474 aaPredicted RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 SAMD15Q9P1V8 674 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 CLCA2Q9UQC9 943 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 GNGT2O14610 69 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 PDE4DQ08499 809 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 RTN1Q16799 776 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 NECAB1Q8N987 351 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 KIF18AQ8NI77 898 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 LRGUKQ96M69 825 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 DENND2AQ9ULE3 1009 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ZMYND10O75800 440 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 NPR1P16066 1061 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 MCM5P33992 734 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 DDX42Q86XP3 938 aaKnown RBP eCLIP3.8□□□□□ -1.8
NEB-201ENST00000172853 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.8□□□□□ -1.8
NEB-201ENST00000172853 TSGA10Q9BZW7 698 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ZBTB3Q9H5J0 574 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ABI2Q9NYB9 513 aaPredicted RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 KLHL3Q9UH77 587 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 IFT140Q96RY7 1462 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ATAD2Q6PL18 1390 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 N4BP3O15049 544 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 GTPBP6O43824 516 aaPredicted RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 SNRPA1P09661 255 aaKnown RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 PPP1R14AQ96A00 147 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 DBF4Q9UBU7 674 aaPredicted RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 USP21Q9UK80 565 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 PI4K2BG5E9Z4 385 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 IRX5P78411 483 aaPredicted RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 RPAP2Q8IXW5 612 aaPredicted RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 PI4K2BQ8TCG2 481 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 MTRQ99707 1265 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 GIGYF1O75420 1035 aaPredicted RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 HDAC4P56524 1084 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 STX19Q8N4C7 294 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 CNBD1Q8NA66 436 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 OTUB1Q96FW1 271 aaPredicted RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 MOCS3O95396 460 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 TERF1P54274 439 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 ARMC6Q6NXE6 501 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 CCDC25Q86WR0 208 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 TRAK2O60296 914 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 FCHSD1Q86WN1 690 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 MICALL1Q8N3F8 863 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 CDCA7LQ96GN5 454 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 MFSD1Q9H3U5 465 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 SART1O43290 800 aaKnown RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 SRGAP2CP0DJJ0 459 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 ACTN1P12814 892 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 STX1BP61266 288 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 SV2BQ7L1I2 683 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 STX18Q9P2W9 335 aaKnown RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 SUGT1Q9Y2Z0 365 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 KRT2P35908 639 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 GUCA1AP43080 201 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms