RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Akap8Q9DBR0 687 aaKnown RBP28.12■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Ces1hD3Z298 562 aa28.11■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Myl3P09542 204 aa28.11■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Scg2Q03517 617 aa28.11■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Cdkl5Q3UTQ8 938 aa28.11■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Ppp2r5bQ6PD28 497 aa28.11■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Slitrk3Q810B9 980 aa28.11■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Tmtc2Q56A06 836 aa28.1■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Rbm28Q8CGC6 750 aaKnown RBP28.1■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Terf2ipQ91VL8 393 aa28.1■■■□□ 2.09
Pcf11-205ENSMUST00000208255 SmapQ9R0P4 181 aaKnown RBP28.1■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Mmp20P57748 482 aa28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Cplx2P84086 134 aa28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Slc10a4Q3UEZ8 437 aa28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Phf20l1Q8CCJ9 1013 aa28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Plcd3Q8K2J0 785 aa28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Tut1Q8R3F9 869 aa28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Igf2rQ07113 2483 aaKnown RBP28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Calm1P0DP26 149 aaKnown RBP28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Calm2P0DP27 149 aaKnown RBP28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Calm3P0DP28 149 aaKnown RBP28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Traf3ip1Q149C2 625 aa28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Brip1Q5SXJ3 1174 aa28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Rtn1Q8K0T0 780 aa28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Acot3Q9QYR7 432 aa28.09■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Ttll12Q3UDE2 639 aa28.08■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Mad2l2Q9D752 211 aa28.08■■■□□ 2.09
Pcf11-205ENSMUST00000208255 WaplQ65Z40 1200 aaKnown RBP28.07■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Ccdc66Q6NS45 935 aa28.07■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Mtmr4Q91XS1 1190 aa28.07■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Tomm22Q9CPQ3 142 aa28.07■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Myh8P13542 1937 aa28.07■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Stx8O88983 236 aa28.06■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Babam1Q3UI43 333 aa28.06■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Krt74Q6IFZ9 495 aa28.06■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Senp6Q6P7W0 1132 aa28.06■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Tacc1Q6Y685 774 aa28.06■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Ccar2Q8VDP4 922 aaKnown RBP28.06■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Trex1Q91XB0 314 aa28.06■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Tmem47Q9JJG6 181 aa28.06■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Ccdc88aQ5SNZ0 1873 aa28.06■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Plcb2A3KGF7 1181 aa28.06■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Zfp953Q3UPV7 304 aa28.06■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Kif1bpQ6ZPU9 617 aa28.06■■■□□ 2.08
Pcf11-205ENSMUST00000208255 FosbP13346 338 aa28.05■■■□□ 2.08
Pcf11-205ENSMUST00000208255 PgfP49764 158 aa28.05■■■□□ 2.08
Pcf11-205ENSMUST00000208255 LyarQ08288 388 aaKnown RBP28.05■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Wdr93Q402B2 695 aa28.05■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Zfp317Q8C0Q5 607 aa28.05■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Gimap7Q8R379 293 aa28.05■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Il21rQ9JHX3 529 aa28.05■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Pagr1bF6V0H0 108 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Prkg1P0C605 671 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Sept2P42208 361 aaKnown RBP28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Senp5Q6NXL6 749 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 CerkQ8K4Q7 531 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Pagr1aQ99L02 253 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Mad1l1Q9WTX8 717 aaKnown RBP28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Usp31E9Q6Y8 1344 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 MycnP03966 462 aaKnown RBP28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Glra4Q61603 456 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Ccdc82Q6PG04 518 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Tbc1d5Q80XQ2 815 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Inpp5bQ8K337 993 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Lrrc2Q8VDB8 371 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Ttll1Q91V51 423 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Trmt112Q9DCG9 125 aa28.04■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Atp8b3Q6UQ17 1335 aa28.03■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Alppl2P24823 529 aa28.03■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Usp5P56399 858 aaKnown RBP28.03■■■□□ 2.08
Pcf11-205ENSMUST00000208255 1700013D24RikQ0P521 120 aa28.03■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Ifit1Q64282 463 aa28.03■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Scfd2Q8BTY8 684 aa28.03■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Clstn1Q9EPL2 979 aa28.03■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Eif4enif1Q9EST3 983 aaKnown RBP28.03■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Ube2oQ6ZPJ3 1288 aa28.02■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Cdc45Q9Z1X9 566 aa28.02■■■□□ 2.08
Pcf11-205ENSMUST00000208255 Sema3fO88632 785 aa28.01■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Ireb2Q811J3 963 aaKnown RBP28.01■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Pdlim2Q8R1G6 349 aa28.01■■■□□ 2.07
Pcf11-205ENSMUST00000208255 SdsQ8VBT2 327 aa28.01■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Fam122aQ9DB52 284 aa28.01■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Stk39Q9Z1W9 556 aa28.01■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Cxcl9P18340 126 aa28.01■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Znf697Q569E7 569 aa28.01■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Ddx55Q6ZPL9 600 aaKnown RBP28.01■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Scfd1Q8BRF7 639 aaKnown RBP28.01■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Lonrf3Q9D4H7 753 aa28.01■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Ubac1Q8VDI7 409 aa28■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Nop2Q922K7 793 aaKnown RBP28■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Cep89Q9CZX2 791 aa28■■■□□ 2.07
Pcf11-205ENSMUST00000208255 A430078G23RikE9Q7Y4 484 aa27.99■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Zbtb39Q6PDK0 712 aa27.99■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Arhgef6Q8K4I3 771 aa27.99■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Frmpd4A2AFR3 1320 aa27.99■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Ubash3aQ3V3E1 624 aa27.98■■■□□ 2.07
Pcf11-205ENSMUST00000208255 A0A1Y7VML8 143 aa27.98■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Stag2O35638 1231 aa27.98■■■□□ 2.07
Pcf11-205ENSMUST00000208255 Prpf3Q922U1 683 aaKnown RBP27.98■■■□□ 2.07
Pcf11-205ENSMUST00000208255 CsadQ9DBE0 493 aa27.98■■■□□ 2.07
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms