RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Ccnd3P30282 292 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Cct2P80314 535 aaKnown RBP9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Olfm4Q3UZZ4 505 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 QarsQ8BML9 775 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Pappa2E9PZ87 1789 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 TrioQ0KL02 3102 aa9.77□□□□□ -0.84
Trim39-205ENSMUST00000173369 MccE9PWI3 1003 aa9.77□□□□□ -0.84
Trim39-205ENSMUST00000173369 Kctd1Q5M956 257 aa9.77□□□□□ -0.84
Trim39-205ENSMUST00000173369 BC048507Q80ZS7 89 aa9.77□□□□□ -0.84
Trim39-205ENSMUST00000173369 Stac3Q8BZ71 360 aa9.77□□□□□ -0.84
Trim39-205ENSMUST00000173369 OplahQ8K010 1288 aa9.77□□□□□ -0.84
Trim39-205ENSMUST00000173369 Pms1Q8K119 917 aa9.77□□□□□ -0.84
Trim39-205ENSMUST00000173369 EhhadhQ9DBM2 718 aa9.77□□□□□ -0.84
Trim39-205ENSMUST00000173369 Trmt112Q9DCG9 125 aa9.77□□□□□ -0.84
Trim39-205ENSMUST00000173369 SetQ9EQU5 289 aaKnown RBP9.77□□□□□ -0.84
Trim39-205ENSMUST00000173369 Plxnb2B2RXS4 1842 aa9.77□□□□□ -0.85
Trim39-205ENSMUST00000173369 Tfcp2l1Q3UNW5 479 aa9.77□□□□□ -0.85
Trim39-205ENSMUST00000173369 Fbxo28Q8BIG4 368 aa9.77□□□□□ -0.85
Trim39-205ENSMUST00000173369 Cep55Q8BT07 462 aa9.77□□□□□ -0.85
Trim39-205ENSMUST00000173369 H2-Q4Q8HWB2 354 aa9.77□□□□□ -0.85
Trim39-205ENSMUST00000173369 Akap8Q9DBR0 687 aaKnown RBP9.77□□□□□ -0.85
Trim39-205ENSMUST00000173369 Gm30191A0A0U1RNT7 187 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Tbc1d8bA3KGB4 1114 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Prpmp5E9PXN1 296 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 FosbP13346 338 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Mybl2P48972 704 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 EvcP57680 1005 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Tpm2P58774 284 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Fxr1Q61584 677 aaKnown RBP9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 VwdeQ6DFV8 926 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Ccp110Q7TSH4 1004 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Sgsm2Q80U12 1005 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 DlatQ8BMF4 642 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Ccdc178Q8CDV0 866 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Rbm28Q8CGC6 750 aaKnown RBP9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 MyocdQ8VIM5 935 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Tdrd3Q91W18 743 aaKnown RBP9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Ltbp2O08999 1813 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Speer4f2E9Q366 295 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Rbm46P86049 533 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Rasa3Q60790 834 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Sp8Q8BMJ8 486 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Pus7lQ8CE46 702 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Ttc8Q8VD72 515 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Snapc2Q91XA5 359 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Dicer1Q8R418 1916 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Hap1O35668 628 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Pde6aP27664 859 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Atoh1P48985 351 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Slc9c1Q6UJY2 1175 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Tti2Q8BGV4 512 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Rnf41Q8BH75 317 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Bri3bpQ8BXV2 253 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Terb1Q8C0V1 768 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 E2f4Q8R0K9 410 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Rfc4Q99J62 364 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Ssr1Q9CY50 286 aaKnown RBP9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Odf2lQ9D478 642 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Q9D9S1 216 aa9.76□□□□□ -0.85
Trim39-205ENSMUST00000173369 Senp5Q6NXL6 749 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Exoc8Q6PGF7 716 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Epha10Q8BYG9 1007 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Il31raQ8K5B1 716 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Defb15Q8R2I5 79 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Mtmr4Q91XS1 1190 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Rnf181Q9CY62 165 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Casp12O08736 419 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Serpinb2P12388 415 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 CtshP49935 333 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 RubcnlQ3TD16 648 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Gm21985Q6P6P5 1106 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Tsr2Q8C8T8 191 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Pdlim2Q8R1G6 349 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Tmem47Q9JJG6 181 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Cry2Q9R194 592 aa9.75□□□□□ -0.85
Trim39-205ENSMUST00000173369 Vmn2r23E9PXI5 849 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Stag2O35638 1231 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 MyocO70624 490 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Eif5P59325 429 aaKnown RBP9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Pald1P70261 859 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 WasP70315 520 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Ttbk2Q3UVR3 1243 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Scnn1aQ61180 699 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Il21rQ9JHX3 529 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Homer1Q9Z2Y3 366 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Scn10aQ6QIY3 1958 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Zscan18E9PUD6 809 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Rfx1P48377 963 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Rrp12Q6P5B0 1295 aaKnown RBP9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Lrrc15Q80X72 579 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Syne4Q8CII8 388 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Tm4sf4Q91XD3 202 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 HlcsQ920N2 722 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Pdcd6ipQ9WU78 869 aaKnown RBP9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Zbtb12Q9Z150 459 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Btbd19S4R1I0 287 aa9.74□□□□□ -0.85
Trim39-205ENSMUST00000173369 Pus7B7ZNL8 666 aaKnown RBP9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 WtapQ9ER69 396 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Zcchc17Q9ESX4 241 aaKnown RBP9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 PcntP48725 2898 aa9.73□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms