RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Ifit1Q64282 463 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 ChmQ9QXG2 665 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Sh3bp1P55194 680 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Zbtb40Q6PCS8 1258 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Asic4Q7TNS7 539 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Znf526Q8BI66 675 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Pm20d1Q8C165 503 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Sorbs3Q9R1Z8 733 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Zscan18E9PUD6 809 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Myo1aO88329 1043 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Ankrd24Q80VM7 985 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Naa30Q8CES0 364 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Gtpbp10Q8K013 366 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Rilpl1Q9JJC6 406 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Krt71Q9R0H5 524 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Magi3Q9EQJ9 1476 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Cnbd1B1AWM0 430 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Ttll12Q3UDE2 639 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Enox2Q8R0Z2 598 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 4921530L21RikQ9CQ47 274 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 CutaQ9CQ89 177 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Abca5Q8K448 1642 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Gm6121L7MUF1 212 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 PrphP15331 475 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Idi1P58044 227 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Zmynd15Q8C0R7 736 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Cep83Q9D5R3 692 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Trpc3Q9QZC1 836 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Wdr17E9Q271 1322 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Cyp2j7A0A140T8U1 504 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Unc5clQ6R653 518 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 EhhadhQ9DBM2 718 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Ube3bQ9ES34 1070 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Heatr4E9Q357 955 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Pde1bQ01065 535 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Nlrx1Q3TL44 975 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Wdr70Q3TWF6 657 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Znf697Q569E7 569 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Miga2Q8BK03 593 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Pcdha7Q91Y13 937 aa17.18■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Esr2O08537 530 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Ncf2O70145 525 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Tas2r124Q7M718 309 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Synpo2Q91YE8 1087 aaKnown RBP17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Med23Q80YQ2 1367 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Stim2P83093 746 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Lrp2bpQ9D4C6 346 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Ripply1Q2WG77 201 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Rnf40Q3U319 1001 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Rps6ka5Q8C050 863 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Zfp113Q8C689 439 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 C130026I21RikQ8C898 291 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Arpp21Q9DCB4 807 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 AlkP97793 1621 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Clasp1Q80TV8 1535 aaKnown RBP17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Prdm11A2AGX3 565 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Vps41Q5KU39 853 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Vat1lQ80TB8 417 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Card14Q99KF0 999 aa17.17■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Kiaa1107Q80TK0 1369 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Zfp597E9Q6S0 419 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Gm6583E9Q8Z1 469 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Anxa1P10107 346 aaKnown RBP17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Kif22Q3V300 660 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Lonrf3Q9D4H7 753 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Nlrp5Q9R1M5 1163 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Lmnb2P21619 596 aaKnown RBP17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Dis3l2Q8CI75 870 aaKnown RBP17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Dbndd1Q9CZ00 160 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Gm43638A0A0J9YU36 694 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Tuft1O08970 390 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Actn3O88990 900 aaKnown RBP17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Vps52Q8C754 723 aaKnown RBP17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Cacna2d3Q9Z1L5 1091 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Trappc10Q3TLI0 1259 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Trim37Q6PCX9 961 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Slain2Q8CI08 581 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Ccdc7Q9D541 371 aa17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Eef1gQ9D8N0 437 aaKnown RBP17.16■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Spata31d1bE9QA57 1361 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Gm4297D3YWB7 211 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Ctnna1P26231 906 aaKnown RBP17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 EnahQ03173 802 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Ccdc174Q3U155 467 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Sestd1Q80UK0 696 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Cst12Q9DAN8 128 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Nhej1Q3KNJ2 295 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Armc2Q3URY6 854 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Tsr1Q5SWD9 803 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Cdc23Q8BGZ4 597 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Tekt2Q922G7 430 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 PdclQ9DBX2 301 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 H2-OaQ9QWV1 250 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Taf4E9QAP7 1042 aaKnown RBP17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Slc27a1Q60714 646 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Sp4Q62445 782 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Desi2Q9D291 194 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 FibpQ9JI19 357 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Mettl14Q3UIK4 456 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 PaoxQ8C0L6 504 aa17.15■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms