RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Arhgap18Q8K0Q5 663 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Nxf1Q99JX7 618 aaKnown RBP18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Gm3404Q9D506 307 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Camsap2Q8C1B1 1461 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Gm21083A0A0G2JFD5 256 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Mcf2A2AEU1 1111 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Phldb3E9QAF4 648 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Pdcd2P46718 343 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Pank2Q3U4S0 443 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Lyve1Q8BHC0 318 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Stx19Q8R1Q0 292 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Lrrc8cQ8R502 803 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Stx2Q00262 289 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Mrps26Q80ZS3 200 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Dnm2P39054 870 aaKnown RBP18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Sh3bp1P55194 680 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Fam207aP58468 219 aaKnown RBP18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Ufl1Q8CCJ3 793 aaKnown RBP18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Znf467Q8JZL0 594 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Snx1Q9WV80 522 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Dthd1E9PZX1 795 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Slc7a6osQ7TPE5 306 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Ascc2Q91WR3 749 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Trim66Q924W6 1242 aa18.22■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Eif6O55135 245 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Slc27a3O88561 667 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Ccne1Q61457 408 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Pdcd7Q9WTY1 482 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Krt14Q61781 484 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Tubb2aQ7TMM9 445 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Tubb2bQ9CWF2 445 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Trim38Q5SZ99 471 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Ppfia4B8QI36 1187 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Krt9Q6RHW0 743 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Prkag2Q91WG5 566 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Sept3Q9Z1S5 350 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 4933406M09RikG3XA12 479 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Trim71Q1PSW8 855 aaKnown RBP18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 EprsQ8CGC7 1512 aaKnown RBP18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Pcyt1aP49586 367 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Lamc2Q61092 1191 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Ppp1r12bQ8BG95 976 aa18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Sde2Q8K1J5 448 aaKnown RBP18.21■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Znf568E9PYI1 671 aa18.21■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Tbc1d9bQ5SVR0 1263 aa18.21■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Znf507Q6ZPY5 941 aa18.21■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gstt4Q9D4P7 240 aa18.21■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gm6370A0A0G2JGX9 315 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gm45140A0A0N4SUM8 220 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gm6309L7N481 315 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Atp12aQ9Z1W8 1035 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Tnip3A0A1D5RMN0 279 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Serpini1O35684 410 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gbp4A4UUI3 631 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Q3KNL4 93 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ankrd36D3Z4K0 1415 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Trappc10Q3TLI0 1259 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Nlrp1bA1Z198 1177 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ddit3P35639 168 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Mdh1bQ5F204 500 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ckap2lQ7TS74 745 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gnat2P50149 354 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Arhgef9Q3UTH8 516 aa18.2■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Krt12Q64291 487 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 LzicQ8K3C3 190 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gm1604bQ3TRG0 118 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Srrm1Q52KI8 946 aaKnown RBP18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Acbd5Q5XG73 508 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ivns1abpQ920Q8 642 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gm3402K7N5P2 326 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Trim60Q8VI40 466 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Zswim7Q9CWQ2 152 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Fyb2A2A995 729 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gm4297D3YWB7 211 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gm17615E9Q9P2 165 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Pak1O88643 545 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Znf652Q5DU09 608 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 MesdQ9ERE7 224 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Dnajc7Q9QYI3 494 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Kif21aQ9QXL2 1672 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 MthfslL7N466 203 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Nrbf2Q8VCQ3 287 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ccdc125Q5U465 500 aa18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 MtbpQ8BJS8 894 aaKnown RBP18.19■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Serpind1P49182 478 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Atp6v1aP50516 617 aaKnown RBP18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Xrcc6P23475 608 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ftl1P29391 183 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Stx1bP61264 288 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 YwhahP68510 246 aaKnown RBP18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Armc6Q8BNU0 468 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Rapgef5Q8C0Q9 814 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Hexim1Q8R409 356 aaKnown RBP18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Sorbs3Q9R1Z8 733 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 SelenovD3YXG1 328 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Parp2O88554 559 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gpc4P51655 557 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Osbpl1aQ91XL9 950 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Lca5Q80ST9 704 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Tom1l1Q923U0 474 aa18.18■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms