RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Morc4Q8BMD7 928 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Rbm5Q91YE7 815 aaKnown RBP11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Msh6P54276 1358 aaKnown RBP11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Kcnk16G5E845 292 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ccdc113Q8C5T8 377 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Spata32Q8C5V0 334 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Fbxo18Q8K2I9 1042 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Pcdha12Q91Y18 950 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Cyth1Q9QX11 398 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ugt1a5B2RT14 529 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Apol10bG3X9K7 334 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Chl1P70232 1209 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 SpopQ6ZWS8 374 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Znf365Q8BG89 408 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 PigoQ9JJI6 1093 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Bpifb4A2BGH0 617 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Zbtb16Q3UQ17 673 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ptcd1Q8C2E4 695 aaKnown RBP11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Cep57Q8CEE0 500 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Tmem60Q8K174 133 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Nphp4P59240 1425 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Izumo3A6PWV3 263 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Zmym1Q3TJB1 983 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ap5z1Q3U829 807 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ccdc87Q8CDL9 855 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Slc35f6Q8VE96 372 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Rrp1bQ91YK2 724 aaKnown RBP11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Nuf2Q99P69 463 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Psma8Q9CWH6 250 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Aox4Q3TYQ9 1336 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Sec24cG3X972 1096 aaKnown RBP11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Zbtb38Q3LR78 1197 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Dzip1lQ499E4 774 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ifih1Q8R5F7 1025 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Sh2b1Q91ZM2 756 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 3830403N18RikQ9D6C3 208 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Plekho1Q9JIY0 408 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Znf394Q9Z1D9 521 aa11.32□□□□□ -0.6
Lig4-201ENSMUST00000095476 Lcmt1A0A0U1RNF2 332 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Bicdl1A0JNT9 577 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Otud7bB2RUR8 840 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Myo1eE9Q634 1107 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Rpl13P47963 211 aaKnown RBP11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Myo1fP70248 1099 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ccdc92bQ5SUE3 299 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Bank1Q80VH0 783 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Rnf168Q80XJ2 565 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Fermt3Q8K1B8 665 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ube2q2Q8K2Z8 378 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Champ1Q8K327 802 aaKnown RBP11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Fam50bQ9WTJ8 334 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Eef1bO70251 225 aaKnown RBP11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 HdxQ14B70 692 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Cage1Q5IR70 849 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Krt74Q6IFZ9 495 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Zbtb40Q6PCS8 1258 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Q8BWG4 1187 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Sirt1Q923E4 737 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Mei1Q9D4I2 1268 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Plch2A2AP18 1501 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ppp1r9aH3BJD6 1292 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Hnrnph1O35737 449 aaKnown RBP11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gsta4P24472 222 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Git1Q68FF6 770 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Fbxo41Q6NS60 873 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Vipas39Q8BGQ1 491 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Pwp2Q8BU03 919 aaKnown RBP11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Serpinb13Q8CDC0 389 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Kcnj14Q8JZN3 434 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Trim68Q8K243 485 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Anapc4Q91W96 807 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Taf5lQ91WQ5 589 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Acsl3Q9CZW4 720 aaKnown RBP11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Abt1Q9QYL7 269 aaKnown RBP11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Tulp1Q9Z273 543 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Frmpd2A0A140LI67 1392 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Mast3Q3U214 1321 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Lrrc74aA0A1Y7VMD6 494 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gm10110D3Z5M2 615 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Lnx1O70263 728 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Dcaf17Q3TUL7 519 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 LbrQ3U9G9 626 aaKnown RBP11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ptpn14Q62130 1189 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Abhd8Q8R0P8 439 aa11.31□□□□□ -0.6
Lig4-201ENSMUST00000095476 Skint5A7XUY5 1461 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gm28043E0CXC2 719 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Mroh9G5E8L9 891 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Caprin2Q05A80 1031 aaKnown RBP11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 HdlbpQ8VDJ3 1268 aaKnown RBP11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 PalldQ9ET54 1408 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Nova2D3YVV7 556 aaKnown RBP11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 AdkP55264 361 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Lrriq3Q14DL3 633 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Nhej1Q3KNJ2 295 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Jarid2Q62315 1234 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 LpxnQ99N69 386 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Appbp2Q9DAX9 585 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Pck1Q9Z2V4 622 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 TnksQ6PFX9 1320 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gm5580A0A0N4SVP8 411 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms