RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Nxnl2Q9D531 156 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Plscr1Q9JJ00 328 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Pkd2l2Q9JLG4 621 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Hmg20bQ9Z104 317 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Large1Q9Z1M7 756 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Atp12aQ9Z1W8 1035 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Usp42B2RQC2 1324 aaKnown RBP10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Tet3Q8BG87 1668 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Phldb3E9QAF4 648 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 RpsaP14206 295 aaKnown RBP10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Xrcc6P23475 608 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Kif5cP28738 956 aaKnown RBP10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Shox2P70390 331 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Tspan18Q80WR1 248 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ehd2Q8BH64 543 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Gga1Q8R0H9 635 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Nup58Q8R332 587 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Klhdc4Q921I2 584 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Mfap3lQ9D3X9 409 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ndst4Q9EQW8 872 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 NpatQ8BMA5 1420 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Znf335A2A5K6 1337 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Pramel3A2AHA7 463 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Gm7903A2AWL1 463 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 AV320801A2AWL3 467 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Gm15023L7MUB4 467 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 CatspereP0DP43 985 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ctnnd1P30999 938 aaKnown RBP10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Akr1b8P45377 316 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Pfkfb1P70266 471 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 GmncQ3URY2 333 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Lrrfip1Q3UZ39 729 aaKnown RBP10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Mylk4Q5SUV5 386 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Serpinb1cQ5SV42 375 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Azin2Q8BVM4 459 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Trim59Q922Y2 403 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Kif9Q9WV04 790 aa10.87□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 A0A0U1RNP2 1173 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Cyp26c1B2RXA7 518 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ppp1r9aH3BJD6 1292 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Atp2a2O55143 1044 aaKnown RBP10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Lrrc4bP0C192 709 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Oxr1Q4KMM3 866 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Nab2Q61127 525 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Mrps31Q61733 384 aaKnown RBP10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Tpp2Q64514 1262 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Cep55Q8BT07 462 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Zbtb8bQ8CII0 484 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Tdrd7Q8K1H1 1086 aaKnown RBP10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Atp6v0a4Q920R6 833 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Toe1Q9D2E2 511 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 4930449I24RikQ9D5E3 319 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Kcnh3Q9WVJ0 1095 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Fbxl16A2RT62 479 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Sash1P59808 1230 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Epas1P97481 874 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Hdgfl1Q2VPR5 283 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Mphosph8Q3TYA6 858 aaKnown RBP10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Tmprss11aQ3UQ41 389 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Nr1d1Q3UV55 615 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Irak1Q62406 710 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Krt42Q6IFX2 452 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Trim37Q6PCX9 961 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Zic5Q7TQ40 622 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Rab11fip4Q8BQP8 635 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Zkscan8Q8BSL0 588 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 OplahQ8K010 1288 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Stk38Q91VJ4 465 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Peg12Q9WVA7 283 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Morc1Q9WVL5 950 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Cacna2d3Q9Z1L5 1091 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Pitpnm2Q6ZPQ6 1335 aa10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Kiaa0232Q80U59 1396 aaKnown RBP10.86□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Sycp2lA0A0M3U1B0 842 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Gm5624F6ZZG8 207 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Cyp26a1O55127 497 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Snx12O70493 165 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 GnaqP21279 359 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 RubcnlQ3TD16 648 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Hif1aQ61221 836 aaKnown RBP10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Lrrn2Q6PHP6 730 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Daam2Q80U19 1115 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 D130040H23RikQ8BII3 405 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Rint1Q8BZ36 792 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 N4bp3Q8C7U1 537 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ablim1Q8K4G5 861 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Usp15Q8R5H1 981 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 MbipQ99LQ1 341 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Polr3cQ9D483 533 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Arpc5lQ9D898 153 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Pdcd6ipQ9WU78 869 aaKnown RBP10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Sart1Q9Z315 806 aaKnown RBP10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Rims2Q9EQZ7 1530 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ugt1a5B2RT14 529 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Tpm3-rs7D3Z2H9 248 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Trappc3O55013 180 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Sptlc2P97363 560 aaKnown RBP10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Slc38a10Q5I012 1090 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Kif3bQ61771 747 aa10.85□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Sec24bQ80ZX0 1251 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms