RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Tshz3Q8CGV9 1081 aa13.68□□□□□ -0.22
Upk3b-201ENSMUST00000062606 MajinQ9D992 256 aa13.68□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Mroh6V9GX81 722 aa13.68□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Fdx1P46656 188 aa13.68□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Sez6lQ6P1D5 963 aa13.68□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Ccdc47Q9D024 483 aaKnown RBP13.68□□□□□ -0.22
Upk3b-201ENSMUST00000062606 CpvlQ9D3S9 478 aa13.68□□□□□ -0.22
Upk3b-201ENSMUST00000062606 FliiQ9JJ28 1271 aa13.68□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Irs4Q9Z0Y7 1216 aa13.68□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Zfp651E9PZ11 729 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Elmsan1E9Q2I4 1089 aaKnown RBP13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Tuft1O08970 390 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Rnf216P58283 853 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 AaasP58742 546 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Anapc15P60007 132 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Dok7Q18PE0 504 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Ptcd1Q8C2E4 695 aaKnown RBP13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Zfp446Q8C9M8 523 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Tmem221Q8K071 230 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Unc45aQ99KD5 944 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Calr3Q9D9Q6 380 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Neurod6P48986 337 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Csrnp1P59054 583 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Nup88Q8CEC0 753 aaKnown RBP13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Ferd3lQ923Z4 168 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Pold1P52431 1105 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Gtf2f1Q3THK3 508 aaKnown RBP13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 VeztQ3ZK22 780 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Ube3cQ80U95 1083 aa13.67□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Cyp2c69E9PXC3 491 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Nf2P46662 596 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Mnat1P51949 309 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Cyp2c40P56657 491 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Fhod1Q6P9Q4 1197 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Ddx42Q810A7 929 aaKnown RBP13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Map10Q8BJS7 891 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Ttc27Q8CD92 847 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Calcoco1Q8CGU1 691 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Snrnp27Q8K194 155 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 RestQ8VIG1 1082 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Stx6Q9JKK1 255 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 ErmapQ9JLN5 566 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Ttc30a2A2AKQ8 664 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Trove2O08848 538 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Stat5bP42232 786 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Trak2Q6P9N8 913 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Spats2Q8K1N4 545 aaKnown RBP13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Polr3dQ91WD1 398 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Ttc30a1Q99J38 664 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Tlcd1Q99JT6 247 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Ttc30bQ9CY00 664 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Popdc2Q9ES82 367 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Coro1cQ9WUM4 474 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Plxnb2B2RXS4 1842 aa13.66□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Rbbp8nlA2ABX0 614 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 H2afxP27661 143 aaKnown RBP13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Alox12eP55249 662 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Frat1P70339 274 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Utp18Q5SSI6 552 aaKnown RBP13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Tmem179Q8BHH9 233 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Ccdc7Q9D541 371 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Klrk1O54709 232 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Tyro3P55144 880 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Polr3gQ6NXY9 223 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Erlin2Q8BFZ9 340 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Ppfia2Q8BSS9 1257 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 DpydQ8CHR6 1025 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Aox3G3X982 1335 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Frmd7A2AD83 703 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Kifc2O08672 792 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 OatP29758 439 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Ppp4cP97470 307 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Babam1Q3UI43 333 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Pla2g4eQ50L42 875 aa13.65□□□□□ -0.22
Upk3b-201ENSMUST00000062606 Wdr33Q8K4P0 1330 aaKnown RBP13.64□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Klra6Q60653 266 aa13.64□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Sgsm2Q80U12 1005 aa13.64□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Stag1Q9D3E6 1258 aa13.64□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Brca1P48754 1812 aa13.64□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Eddm13E9Q7F5 164 aa13.64□□□□□ -0.23
Upk3b-201ENSMUST00000062606 AsnsQ61024 561 aa13.64□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Kirrel3Q8BR86 778 aa13.64□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Fbxl16A2RT62 479 aa13.64□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Cd22P35329 862 aa13.64□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Adgre1Q61549 931 aa13.64□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Zfp42P22227 288 aa13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Pfkfb2P70265 519 aa13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 NogP97466 232 aa13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Slc10a5Q5PT54 434 aa13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Dusp9Q7TNL7 452 aa13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Ints3Q7TPD0 1041 aaKnown RBP13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Sept9Q80UG5 583 aa13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Cc2d1bQ8BRN9 848 aa13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Skor1Q8BX46 964 aa13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Zfp804bA0A0G2JGH6 1343 aa13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Sstr3P30935 428 aa13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Cxcl11Q9JHH5 100 aa13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Nfu1Q9QZ23 255 aa13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Smc1aQ9CU62 1233 aaKnown RBP13.63□□□□□ -0.23
Upk3b-201ENSMUST00000062606 Slx4ipQ9D7Y9 413 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms