RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Q3UZV7 1028 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Kpna1Q60960 538 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Gpr152Q8BXS7 511 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Rpgrip1lQ8CG73 1264 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Nol6Q8R5K4 1152 aaKnown RBP10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Znf687Q9D2D7 1237 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Dnajc7Q9QYI3 494 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Slx4Q6P1D7 1565 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Dll3O88516 592 aa10.04□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Pla2g4bP0C871 782 aa10.04□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Treml4Q3LRV9 263 aa10.04□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Usp30Q3UN04 517 aa10.04□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Sall4Q8BX22 1067 aa10.04□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Dusp15Q8R4V2 235 aa10.04□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 PrameQ9D4Z5 464 aa10.04□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Ythdc2B2RR83 1445 aaKnown RBP10.04□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Soga1E1U8D0 1418 aa10.04□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 PtprtQ99M80 1454 aa10.04□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Arhgap27A2AB59 869 aa10.03□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Gm14025A2AP89 1413 aa10.03□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Gm5878E9PUB3 99 aa10.03□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Ankrd35E9Q9D8 996 aa10.03□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Hepacam2Q4VAH7 463 aa10.03□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Gm156Q58A37 223 aa10.03□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Rtp3Q5QGU6 474 aa10.03□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Ecm1Q61508 559 aa10.03□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Sh3rf1Q69ZI1 892 aa10.03□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 MaobQ8BW75 520 aa10.03□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Taok3Q8BYC6 898 aa10.03□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Cog1Q9Z160 980 aa10.03□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Arhgef12Q8R4H2 1543 aaKnown RBP10.02□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 PtpraP18052 829 aa10.02□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 RxrbP28704 520 aa10.02□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Strn4P58404 760 aa10.02□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 SucoQ8C341 1250 aa10.02□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Pprc1Q6NZN1 1644 aa10.02□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Gm7298A0A0N4SVU1 1476 aa10.02□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Rpap1Q80TE0 1409 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Osbpl7A2A716 963 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Mroh5E9PUJ8 762 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Cyp2c23E9Q5K4 494 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Akap1O08715 857 aaKnown RBP10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Ano9P86044 747 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 MyrflQ3UN70 904 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Mum1l1Q4VA55 681 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Gas2l2Q5SSG4 860 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Gpr150Q8BL07 427 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Ankmy1Q8C0W1 906 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Taf6lQ8R2K4 616 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Vmn1r51Q8VIC6 319 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Slc15a4Q91W98 574 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Pcdha1Q91Y21 948 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Znf524Q9D0B1 321 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Glod5Q9D8I3 148 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Clec3aQ9EPW4 196 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Ak9G3UYQ4 1894 aa10.01□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Snx12O70493 165 aa10□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 GsnP13020 780 aa10□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Meox1P32442 253 aa10□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Igfbp4P47879 254 aa10□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Acap3Q6NXL5 833 aa10□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Znf507Q6ZPY5 941 aa10□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 CtsoQ8BM88 312 aa10□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Ube3dQ8BX13 368 aa10□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Q922C1 641 aa10□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 MrgprhQ99MT8 321 aa10□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 DhdhQ9DBB8 333 aa10□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Tnip1Q9WUU8 647 aa10□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Trim55G3X8Y1 545 aa9.99□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Pfdn2O70591 154 aa9.99□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Cnga1P29974 684 aa9.99□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Col9a2Q07643 688 aa9.99□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Adh7Q64437 374 aa9.99□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Usp17leQ7M764 540 aa9.99□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Nkx6-1Q99MA9 365 aa9.99□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Setbp1Q9Z180 1582 aa9.99□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Rrbp1Q99PL5 1605 aaKnown RBP9.99□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Cep162Q6ZQ06 1403 aa9.99□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Cux1P53564 1515 aa9.98□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Tmem238lA0A1B0GS74 79 aa9.98□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Ccl7Q03366 97 aa9.98□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Slc2a13Q3UHK1 637 aa9.98□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Ampd1Q3V1D3 745 aa9.98□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 HecaQ3V1N5 544 aaKnown RBP9.98□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Git1Q68FF6 770 aa9.98□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Plin5Q8BVZ1 463 aa9.98□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Fam193aQ8CGI1 1231 aaKnown RBP9.98□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Rnf141Q99MB7 230 aa9.98□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Igdcc4Q9EQS9 1252 aa9.98□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Map6d1Q14BB9 191 aa9.97□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 CyldQ80TQ2 952 aa9.97□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Olfr99Q8VFE4 305 aa9.97□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 DaglbQ91WC9 669 aa9.97□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 AI481877A2ALV5 1481 aa9.97□□□□□ -0.81
Ccdc54-201ENSMUST00000062439 Lrrc3cA0A1B0GRI5 255 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Gm8871F7AXK2 190 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 4933402N22RikF7D1B3 190 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 1810062G17RikG3X8Y2 129 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ncapg2Q6DFV1 1138 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Cpa4Q6P8K8 420 aa9.96□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms