RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Nup98Q6PFD9 1816 aaKnown RBP18.25■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Aox3G3X982 1335 aa18.25■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Scgb2b18A0A087WPA9 112 aa18.25■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Ube4aE9Q735 1028 aa18.25■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 LtbrP50284 415 aa18.25■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Smarca1Q6PGB8 1046 aa18.25■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Pus7lQ8CE46 702 aa18.25■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Card14Q99KF0 999 aa18.25■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Thap2Q9D305 217 aa18.25■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Uso1Q9Z1Z0 959 aaKnown RBP18.25■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Nhsl1Q8CAF4 1587 aa18.24■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Izumo3A6PWV3 263 aa18.24■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Zbtb7aO88939 569 aaKnown RBP18.24■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Tmem143Q8VD26 458 aa18.24■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Rrp1bQ91YK2 724 aaKnown RBP18.24■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Trim34aQ99PP6 485 aa18.24■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Scrn1Q9CZC8 414 aa18.24■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 RabggtaQ9JHK4 567 aa18.24■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Btn2a2A4QPC6 514 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Gcom1E9PZ54 550 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Kif23E9Q5G3 953 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Eif5P59325 429 aaKnown RBP18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Traf3ip1Q149C2 625 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Znhit6Q3UFB2 460 aaKnown RBP18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 MyzapQ3UIJ9 466 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Sik1Q60670 779 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Fam170aQ66LM6 333 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Adam6bQ6IMH7 756 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Igsf9bE9PZ19 1328 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Plch1Q4KWH5 1682 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Serpina16D3Z660 418 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Capn2O08529 700 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Stat5bP42232 786 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Nap1l2P51860 460 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Rtkn2Q14B46 604 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Cct6bQ61390 531 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Caps2Q8BUG5 550 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Fam161bQ8CB59 589 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Fermt2Q8CIB5 680 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Stap2Q8R0L1 411 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Pik3ap1Q9EQ32 811 aa18.23■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Api5O35841 504 aaKnown RBP18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Ano9P86044 747 aa18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Rtel1Q0VGM9 1203 aa18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Mrps31Q61733 384 aaKnown RBP18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Necab1Q8BG18 352 aa18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Larp6Q8BN59 492 aa18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 SowahdQ8BY98 327 aa18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Apol10aQ8CCA5 318 aa18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Ginm1Q91WR6 327 aa18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Myo1hQ9D6A1 958 aa18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Lonp2Q9DBN5 852 aa18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Copb1Q9JIF7 953 aa18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Phrf1A6H619 1682 aa18.22■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Wnt7aP24383 349 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 ItgadQ3V0T4 1168 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 FntaQ61239 377 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Cnnm4Q69ZF7 771 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Lrrn2Q6PHP6 730 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 QarsQ8BML9 775 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Q8C5C9 218 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Tmx1Q8VBT0 278 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Pcdha12Q91Y18 950 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Tab2Q99K90 693 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Golga5Q9QYE6 729 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Rexo5D3YW29 759 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Samd1D3YXK1 519 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Gtf2f1Q3THK3 508 aaKnown RBP18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 C87499Q3UX49 493 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Znf496Q5SXI5 585 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Tacc1Q6Y685 774 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Gga3Q8BMI3 718 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 RadxQ8C779 850 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Tcp11l2Q8K1H7 517 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Trim29Q8R2Q0 587 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Ubac1Q8VDI7 409 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Pla2g12bQ99P27 195 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 NapgQ9CWZ7 312 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Egfl6Q9JJZ5 550 aa18.21■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Cntnap1O54991 1385 aa18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Cnbd1B1AWM0 430 aa18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Zfand4D3Z3C6 739 aa18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Sema6bO54951 886 aa18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Tnni2P13412 182 aa18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Sun3Q5SS91 320 aa18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Otop3Q80UF9 577 aa18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Q8C1R3 189 aa18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Rbm28Q8CGC6 750 aaKnown RBP18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 MlphQ91V27 590 aa18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Uap1Q91YN5 522 aa18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Efcc1Q9JJF6 558 aa18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Hip1rQ9JKY5 1068 aa18.2■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Lcmt1A0A0U1RNF2 332 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Prr16A3KMN5 304 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Qtrt2B8ZXI1 415 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 1700029H14RikE9PY36 240 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Tuft1O08970 390 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Pak1O88643 545 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 MarcksP26645 309 aaKnown RBP18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Ccdc34Q3UI66 367 aa18.19■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms