RNA–Protein interactions for RNA: ENSMUST00000047145.13

Trim41-201, Transcript of E3 ubiquitin-protein ligase TRIM41, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim41, Length 3,432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41-201ENSMUST00000047145 Prpf40bQ80W14 870 aa17.09■□□□□ 0.33
Trim41-201ENSMUST00000047145 Suds3Q8BR65 328 aa17.09■□□□□ 0.33
Trim41-201ENSMUST00000047145 ClasrpQ8CFC7 668 aa17.09■□□□□ 0.33
Trim41-201ENSMUST00000047145 Rbm41Q8JZV4 413 aa17.09■□□□□ 0.33
Trim41-201ENSMUST00000047145 Kcnq3Q8K3F6 873 aa17.09■□□□□ 0.33
Trim41-201ENSMUST00000047145 AdarQ99MU3 1178 aaKnown RBP17.09■□□□□ 0.33
Trim41-201ENSMUST00000047145 Phkg2Q9DB30 406 aa17.09■□□□□ 0.33
Trim41-201ENSMUST00000047145 Pramel3A2AHA7 463 aa17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 Gm7903A2AWL1 463 aa17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 AV320801A2AWL3 467 aa17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 Gm15023L7MUB4 467 aa17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 Gnat1P20612 350 aa17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 Myd88P22366 296 aa17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 CrklP47941 303 aa17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 Klrb1Q0ZUP1 214 aa17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 Psmd1Q3TXS7 953 aa17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 Tmem87bQ8BKU8 555 aa17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 Phldb2Q8K1N2 1249 aa17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 Eif3hQ91WK2 352 aaKnown RBP17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 StrbpQ91WM1 672 aaKnown RBP17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 Bzw1Q9CQC6 419 aaKnown RBP17.08■□□□□ 0.33
Trim41-201ENSMUST00000047145 Tcof1O08784 1320 aaKnown RBP17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Nat1P50294 290 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Krt86P97861 486 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Ccdc129Q14B48 1034 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Tmem109Q3UBX0 243 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Trpc6Q61143 930 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Mrps31Q61733 384 aaKnown RBP17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Exd1Q8CDF7 570 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Mrpl44Q9CY73 333 aaKnown RBP17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 ToporslQ9D2F8 683 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Cfap53Q9D439 514 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Wdr17E9Q271 1322 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Sec24cG3X972 1096 aaKnown RBP17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Ezh1P70351 747 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Rnpc3Q3UZ01 514 aaKnown RBP17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Tcp11l2Q8K1H7 517 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Fam133bQ9CVI2 245 aaKnown RBP17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Rrp15Q9CYX7 281 aaKnown RBP17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Sept14Q9DA97 430 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Plekho1Q9JIY0 408 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Hmg20bQ9Z104 317 aa17.08■□□□□ 0.32
Trim41-201ENSMUST00000047145 Dab2P98078 766 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 Tmem232Q5K6N0 675 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 Gm21985Q6P6P5 1106 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 Asic4Q7TNS7 539 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 GptQ8QZR5 496 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 Pcdhb3Q91XZ7 784 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 Mei1Q9D4I2 1268 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 Abcc10Q8R4P9 1501 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 TnksQ6PFX9 1320 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 Tcp11Q01755 566 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 Mks1Q5SW45 561 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 Zcwpw1Q6IR42 630 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 Wdr35Q8BND3 1181 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 Pold4Q9CWP8 107 aa17.07■□□□□ 0.32
Trim41-201ENSMUST00000047145 Cct6aP80317 531 aaKnown RBP17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Rsrc1Q9DBU6 334 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Noa1Q9JJG9 693 aaKnown RBP17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Dnajc5P60904 198 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Usp13Q5BKP2 858 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Camsap3Q80VC9 1252 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 U2af1l4Q8BGJ9 220 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Sil1Q9EPK6 465 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Zscan18E9PUD6 809 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Hoxa7P02830 229 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Me1P06801 572 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Tmod1P49813 359 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Ell2Q3UKU1 639 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Rc3h1Q4VGL6 1130 aaKnown RBP17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 HellsQ60848 821 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Ankzf1Q80UU1 748 aaKnown RBP17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 MbipQ99LQ1 341 aa17.06■□□□□ 0.32
Trim41-201ENSMUST00000047145 Gm5624F6ZZG8 207 aa17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Ccdc160Q3UYG1 323 aa17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 SrlQ7TQ48 910 aa17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Cwf19l1Q8CI33 537 aa17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Abcf2Q99LE6 628 aaKnown RBP17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Ercc4Q9QZD4 917 aa17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Tnrc6bQ8BKI2 1810 aaKnown RBP17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Pfkfb1P70266 471 aa17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Ezh2Q61188 746 aaKnown RBP17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Ubxn10Q8BG34 277 aa17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Vipas39Q8BGQ1 491 aa17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Slain2Q8CI08 581 aa17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Lrrc2Q8VDB8 371 aa17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Ranbp17Q99NF8 1088 aa17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 Trim56Q80VI1 734 aaKnown RBP17.05■□□□□ 0.32
Trim41-201ENSMUST00000047145 ChkbO55229 394 aa17.04■□□□□ 0.32
Trim41-201ENSMUST00000047145 Sptlc2P97363 560 aaKnown RBP17.04■□□□□ 0.32
Trim41-201ENSMUST00000047145 Ift122Q6NWV3 1182 aa17.04■□□□□ 0.32
Trim41-201ENSMUST00000047145 4930572O03RikQ8C5Y0 211 aa17.04■□□□□ 0.32
Trim41-201ENSMUST00000047145 Tc2nQ91XT6 489 aa17.04■□□□□ 0.32
Trim41-201ENSMUST00000047145 Tmed5Q9CXE7 229 aa17.04■□□□□ 0.32
Trim41-201ENSMUST00000047145 Zc3h13E9Q784 1729 aaKnown RBP17.04■□□□□ 0.32
Trim41-201ENSMUST00000047145 CflarO35732 481 aa17.04■□□□□ 0.32
Trim41-201ENSMUST00000047145 Sult6b1P0CC03 303 aa17.04■□□□□ 0.32
Trim41-201ENSMUST00000047145 Clul1Q3ZRW6 464 aa17.04■□□□□ 0.32
Trim41-201ENSMUST00000047145 ChukQ60680 745 aa17.04■□□□□ 0.32
Trim41-201ENSMUST00000047145 Cep104Q80V31 926 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms