RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Gm3415J3QMS8 315 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Tlr8P58682 1032 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cavin2Q63918 418 aaKnown RBP9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Gm3404Q9D506 307 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Sycp2lA0A0M3U1B0 842 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Vti1aO89116 217 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Prl3d1P18121 224 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Psmc4P54775 418 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Tubb4bP68372 445 aaKnown RBP9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Pnpla2Q8BJ56 486 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Acot11Q8VHQ9 594 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 MesdQ9ERE7 224 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cyp2c69E9PXC3 491 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Ankrd35E9Q9D8 996 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cyp2c40P56657 491 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cep19Q9CQA8 163 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 PtprtQ99M80 1454 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Synpo2Q91YE8 1087 aaKnown RBP9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Plcb1Q9Z1B3 1216 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Tm6sf1P58749 370 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Atp11aP98197 1187 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Eif2aQ8BJW6 581 aaKnown RBP9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 CactinQ9CS00 772 aaKnown RBP9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Zkscan5Q9Z1D8 819 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Rusc2Q80U22 1514 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Gm5624F6ZZG8 207 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Ankrd13cQ3UX43 541 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Gas8Q60779 478 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Rbm15bQ6PHZ5 887 aaKnown RBP9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Tmx3Q8BXZ1 456 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cst12Q9DAN8 128 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Osbpl5Q9ER64 874 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Ccne2Q9Z238 404 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Elf1Q60775 612 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 AticQ9CWJ9 592 aaKnown RBP9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Mroh7A2AVR2 1279 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Btn2a2A4QPC6 514 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Zfp213E9QAW0 468 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 XpcP51612 930 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Atp2b4Q6Q477 1205 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Rexo1Q7TT28 1213 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Scyl2Q8CFE4 930 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Tbc1d2B1AVH7 922 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Stat5bP42232 786 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Chrna5Q2MKA5 467 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Ddx31Q6NZQ2 687 aaKnown RBP9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Sdad1Q80UZ2 687 aaKnown RBP9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Ccdc186Q8C9S4 917 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Tubgcp2Q921G8 905 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 HgsQ99LI8 775 aa9.75□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Kdm1aQ6ZQ88 853 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cfap100Q80VN0 613 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Ncaph2Q8BSP2 607 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Apbb1ipQ8R5A3 670 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Ivns1abpQ920Q8 642 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Stk36Q69ZM6 1316 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Gsta4P24472 222 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Zfp202Q8C879 641 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Gna11P21278 359 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Stmn2P55821 179 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Chl1P70232 1209 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cct5P80316 541 aaKnown RBP9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Nek5Q7TSC3 627 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Mtx1P47802 317 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 GalcP54818 684 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Haus1Q8BHX1 278 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Tubb4aQ9D6F9 444 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Pde4aO89084 844 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Ccpg1Q640L3 753 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Appl2Q8K3G9 662 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Chmp2aQ9DB34 222 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Prdm11A2AGX3 565 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Usp54Q8BL06 1588 aaKnown RBP9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Trim66Q924W6 1242 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Foxp4Q9DBY0 795 aaKnown RBP9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cpsf1Q9EPU4 1441 aaKnown RBP9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Mkrn1Q9QXP6 481 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Setdb1O88974 1307 aa9.74□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Diaph2O70566 1098 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Kif2bQ8C0N1 668 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Skint5A7XUY5 1461 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Gm10378F6XQQ1 160 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 NpcdF8VQB8 469 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Flot1O08917 428 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Axin2O88566 840 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Celf1P28659 486 aaKnown RBP9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Dhx37Q6NZL1 1150 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Map3k11Q80XI6 850 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 SnrkQ8VDU5 748 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cyp2s1Q9DBX6 501 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Tfap4Q9JIZ5 338 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Col17a1Q07563 1470 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Pfkfb1P70266 471 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Smad1P70340 465 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Ankfy1Q810B6 1169 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Tacc2Q9JJG0 1149 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Slc2a13Q3UHK1 637 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 HhatQ8BMT9 499 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Tnip1Q9WUU8 647 aa9.73□□□□□ -0.85
Ttc28-201ENSMUST00000040111 MeiocA2AG06 965 aa9.73□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms