RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 LnpkQ7TQ95 425 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Snx14Q8BHY8 964 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Spata4Q8K3V1 295 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Msantd4Q91YU3 345 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Eef2kO08796 724 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Znf830Q8R1N0 363 aaKnown RBP11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Cd22P35329 862 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Dzip1lQ499E4 774 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Krt39Q6IFX4 482 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Anks1bQ8BIZ1 1259 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Prex2Q3LAC4 1598 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Ccdc92bQ5SUE3 299 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Cdc37Q61081 379 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Rab34Q64008 259 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 C130026I21RikQ8C898 291 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Bzw2Q91VK1 419 aaKnown RBP11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Cnbd1B1AWM0 430 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Gm14525B1AZA0 212 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Gm2012B1B0R1 212 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Atp8a2P98200 1148 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Lrrc43Q3V0L5 667 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Fkbp3Q62446 224 aaKnown RBP11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Gm14819Q62478 212 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Gbp5Q8CFB4 590 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 SlmapQ3URD3 845 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Prdm1Q60636 856 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Abtb2Q7TQI7 1024 aa11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Map3k19E9Q3S4 1311 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Usp28Q5I043 1051 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Tmem132eQ6IEE6 982 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Epn1Q80VP1 575 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Erbb4Q61527 1308 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Fmn2Q9JL04 1578 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Gm10488Q4KL05 212 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Cnnm4Q69ZF7 771 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 CtifQ6PEE2 600 aaKnown RBP11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Uba5Q8VE47 403 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Timm10P62073 90 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 S100a5P63084 93 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Tas2r124Q7M718 309 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Arhgap18Q8K0Q5 663 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 HscbQ8K3A0 234 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Kif21bQ9QXL1 1668 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Slc10a4Q3UEZ8 437 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Klhl29Q80T74 875 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Enox2Q8R0Z2 598 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Eif3cQ8R1B4 911 aaKnown RBP11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Elmsan1E9Q2I4 1089 aaKnown RBP11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Pkp1P97350 728 aaKnown RBP11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Zmynd15Q8C0R7 736 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Bola3Q8CEI1 110 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Cyp2j7A0A140T8U1 504 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Ctnna3Q65CL1 895 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Apbb1ipQ8R5A3 670 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Nip7Q9CXK8 180 aaKnown RBP11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Mrps22Q9CXW2 359 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Actn2Q9JI91 894 aa11.19□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Igsf1Q7TQA1 1317 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Pla2r1Q62028 1487 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Psmc4P54775 418 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Fam170aQ66LM6 333 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Cabp7Q91ZM8 215 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 4931423N10RikQ9D4J9 382 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Tcof1O08784 1320 aaKnown RBP11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 FerP70451 823 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Tmem60Q8K174 133 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Nod2Q8K3Z0 1020 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 2310002L09RikQ9D7L5 217 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Map3k4O08648 1597 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Plch2A2AP18 1501 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Myl3P09542 204 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Suds3Q8BR65 328 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Cabs1Q8C633 391 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 H2afzP0C0S6 128 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Snrpa1P57784 255 aaKnown RBP11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 H2afvQ3THW5 128 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Ppm1fQ8CGA0 452 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Acsl3Q9CZW4 720 aaKnown RBP11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Vstm4T1NXB5 319 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Zc3h12cQ5DTV4 884 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Clic4Q9QYB1 253 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 MthfslL7N466 203 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Wdhd1P59328 1117 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Ccdc129Q14B48 1034 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Acot10Q32MW3 439 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Krt9Q6RHW0 743 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Ulbp1Q8HWA3 334 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 AdpgkQ8VDL4 496 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Trim60Q8VI40 466 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Klc3Q91W40 508 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Xrcc4Q924T3 326 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Clasp1Q80TV8 1535 aaKnown RBP11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Disp3A3KFU9 1347 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Kdm5cP41230 1554 aa11.18□□□□□ -0.62
Ubr1-201ENSMUST00000028728 PrphP15331 475 aa11.17□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Ephb4P54761 987 aa11.17□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Trappc10Q3TLI0 1259 aa11.17□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Ddx54Q8K4L0 874 aaKnown RBP11.17□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Stk10O55098 966 aa11.17□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Sval3Q76I99 144 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms