RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Ankrd40Q5SUE8 363 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Cyp7b1Q60991 507 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Hand2Q61039 217 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Dcaf5Q80T85 946 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Lrsam1Q80ZI6 727 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Osbpl1aQ91XL9 950 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Mfap3Q922T2 349 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Xrcc4Q924T3 326 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Chmp3Q9CQ10 224 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Polr2dQ9D7M8 142 aaKnown RBP13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 TnksQ6PFX9 1320 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 A0A1W2P6Q8 802 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Gm9048A0A1W2P7H4 802 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 A0A1W2P7S8 802 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 A0A1W2P7Z8 802 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Gm9046A0A1W2P855 802 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 4932429P05RikA2ADI4 785 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Kiaa1468Q148V7 1216 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Fam107bQ3TGF2 131 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ppp1r7Q3UM45 361 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Gucy2cQ3UWA6 1072 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ice2Q3UZ18 988 aaKnown RBP13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Cdc5lQ6A068 802 aaKnown RBP13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Papd7Q6PB75 542 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Smc2Q8CG48 1191 aaKnown RBP13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Cap2Q9CYT6 476 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 SelenooQ9DBC0 667 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Abhd2Q9QXM0 425 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Myh7bA2AQP0 1941 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ankrd35E9Q9D8 996 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 PnnO35691 725 aaKnown RBP13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Nkx2-5P42582 318 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Sparcl1P70663 650 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Krt86P97861 486 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Llgl2Q3TJ91 1027 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Prkab2Q6PAM0 271 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Msl1Q6PDM1 616 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Necab1Q8BG18 352 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Cep128Q8BI22 1102 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ranbp6Q8BIV3 1105 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Map10Q8BJS7 891 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Zfp446Q8C9M8 523 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Smc4Q8CG47 1286 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Tcp11l2Q8K1H7 517 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Sash3Q8K352 380 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Cnot6lQ8VEG6 555 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Anapc4Q91W96 807 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 GzmnQ920S1 248 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Mis12Q9CY25 206 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Slc5a4aQ9ET37 656 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Egfl6Q9JJZ5 550 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Uchl5Q9WUP7 329 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Med23Q80YQ2 1367 aa13.61□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Gm13023A2A8N2 498 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 NpcdF8VQB8 469 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Akap2O54931 893 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 NppbP40753 121 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Cnnm1Q0GA42 951 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Kdm7aQ3UWM4 940 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Rasal3Q8C2K5 1041 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 LgsnQ8CIX8 563 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Eif3cQ8R1B4 911 aaKnown RBP13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Q9CYI0 393 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Rsph10bE9PYQ0 876 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Foxn2E9Q7L6 429 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Me1P06801 572 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Pde6aP27664 859 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Stim1P70302 685 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Stim2P83093 746 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Smg7Q5RJH6 1138 aaKnown RBP13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Miga2Q8BK03 593 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 AbraQ8BUZ1 375 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Tldc1Q8K0P3 455 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Adcy3Q8VHH7 1145 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Fam217aQ9D9W6 419 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 NagaQ9QWR8 415 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Angptl3Q9R182 455 aa13.6□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Snx12O70493 165 aa13.59□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Lrrc6O88978 473 aa13.59□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Zrsr2Q62377 462 aaKnown RBP13.59□□□□□ -0.23
Ufd1-201ENSMUST00000005394 ErfeQ6PGN1 340 aa13.59□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Znf653Q6YND2 615 aa13.59□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ctdspl2Q8BG15 465 aa13.59□□□□□ -0.23
Ufd1-201ENSMUST00000005394 3830417A13RikQ8BQJ2 303 aa13.59□□□□□ -0.23
Ufd1-201ENSMUST00000005394 AvenQ9D9K3 342 aa13.59□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Zbtb43Q9DAI4 467 aa13.59□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ulk4Q3V129 1303 aa13.59□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Zfand4D3Z3C6 739 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 AK157302I3ITR1 129 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Grin1P35438 938 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Wee1P47810 646 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Slc12a2P55012 1205 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Cct5P80316 541 aaKnown RBP13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 IntuQ059U7 942 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Clul1Q3ZRW6 464 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Sco1Q5SUC9 284 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 A1cfQ5YD48 595 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Srrm3Q80WV7 648 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Paf1Q8K2T8 535 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 BlmhQ8R016 455 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms