RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Ddx55Q6ZPL9 600 aaKnown RBP17.15■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Arhgef6Q8K4I3 771 aa17.15■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Dmrtc1Q9D9R7 182 aa17.15■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Trpm7Q923J1 1863 aa17.14■□□□□ 0.34
Ercc1-201ENSMUST00000003645 Polr2aP08775 1970 aaKnown RBP17.14■□□□□ 0.34
Ercc1-201ENSMUST00000003645 SynrgQ5SV85 1306 aa17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Sall1Q9ER74 1322 aa17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Pagr1bF6V0H0 108 aa17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Foxp1P58462 705 aa17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 1700013D24RikQ0P521 120 aa17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Slc10a4Q3UEZ8 437 aa17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Limch1Q3UH68 1057 aa17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Senp5Q6NXL6 749 aa17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Lca5Q80ST9 704 aa17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Pagr1aQ99L02 253 aa17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Tomm22Q9CPQ3 142 aa17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Smc3Q9CW03 1217 aaKnown RBP17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Lonrf3Q9D4H7 753 aa17.14■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Frmpd4A2AFR3 1320 aa17.13■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Has3O08650 554 aa17.13■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Adgrg6Q6F3F9 1165 aa17.13■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Kif1bpQ6ZPU9 617 aa17.13■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Trim59Q922Y2 403 aa17.13■□□□□ 0.33
Ercc1-201ENSMUST00000003645 CsadQ9DBE0 493 aa17.13■□□□□ 0.33
Ercc1-201ENSMUST00000003645 TicrrQ8BQ33 1889 aa17.12■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Stag2O35638 1231 aa17.12■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Rgs9O54828 675 aa17.12■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Fgfr2P21803 821 aa17.12■□□□□ 0.33
Ercc1-201ENSMUST00000003645 St18Q80TY4 1045 aa17.12■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Slitrk3Q810B9 980 aa17.12■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Zkscan1Q8BGS3 561 aaKnown RBP17.12■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Ranbp6Q8BIV3 1105 aa17.12■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Mettl16Q9CQG2 553 aaKnown RBP17.12■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Eid1Q9DCR4 169 aa17.12■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Cdc45Q9Z1X9 566 aa17.12■□□□□ 0.33
Ercc1-201ENSMUST00000003645 LdhaP06151 332 aaKnown RBP17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Prkg1P0C605 671 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 PtpraP18052 829 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Llgl2Q3TJ91 1027 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Babam1Q3UI43 333 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Prr7Q3V0I2 269 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Tshz1Q5DTH5 1084 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Tbc1d5Q80XQ2 815 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Me3Q8BMF3 604 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Rtn1Q8K0T0 780 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Clstn1Q9EPL2 979 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Gdpd2Q9ESM6 539 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Prkab1Q9R078 270 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Zfp804bA0A0G2JGH6 1343 aa17.11■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Mmp10O55123 476 aa17.1■□□□□ 0.33
Ercc1-201ENSMUST00000003645 ThbdP15306 577 aa17.1■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Cplx2P84086 134 aa17.1■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Ttll12Q3UDE2 639 aa17.1■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Cdkl5Q3UTQ8 938 aa17.1■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Swap70Q6A028 585 aaKnown RBP17.1■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Riox2Q8CD15 465 aa17.1■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Cep57l1Q8VDS7 400 aa17.1■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Bloc1s2Q9CWG9 143 aa17.1■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Eif4enif1Q9EST3 983 aaKnown RBP17.1■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Cxcl9P18340 126 aa17.09■□□□□ 0.33
Ercc1-201ENSMUST00000003645 GnaqP21279 359 aa17.09■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Ppfia3P60469 1194 aa17.09■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Eme2Q56A04 373 aa17.09■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Ces3aQ63880 571 aa17.09■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Haus6Q6NV99 933 aaKnown RBP17.09■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Trpv1Q704Y3 839 aa17.09■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Kiaa1524Q8BWY9 907 aa17.09■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Gtf3c5Q8R2T8 520 aa17.09■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Ces3bQ8VCU1 571 aa17.09■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Tdrd1Q99MV1 1172 aa17.09■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Aox1O54754 1333 aa17.09■□□□□ 0.33
Ercc1-201ENSMUST00000003645 Ppef2O35385 757 aa17.08■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Myo19Q5SV80 963 aa17.08■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Lrrc15Q80X72 579 aa17.08■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Ms4a5Q810P8 197 aa17.08■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Ireb2Q811J3 963 aaKnown RBP17.08■□□□□ 0.32
Ercc1-201ENSMUST00000003645 U2af1l4Q8BGJ9 220 aa17.08■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Lca5lQ8C0X0 741 aa17.08■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Ubac1Q8VDI7 409 aa17.08■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Gmcl1Q920G9 524 aa17.08■□□□□ 0.32
Ercc1-201ENSMUST00000003645 S1pr4Q9Z0L1 386 aa17.08■□□□□ 0.32
Ercc1-201ENSMUST00000003645 A0A1Y7VML8 143 aa17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Nsrp1Q5NCR9 542 aa17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Sv2cQ69ZS6 727 aa17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Zfp341Q6PGC9 846 aa17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Ccp110Q7TSH4 1004 aa17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Triml1Q8BVP1 470 aa17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Mknk2Q8CDB0 459 aa17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Sulf1Q8K007 870 aa17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Lzts2Q91YU6 671 aa17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Prpf3Q922U1 683 aaKnown RBP17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Mrpl44Q9CY73 333 aaKnown RBP17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 AllcQ9JHX6 414 aa17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Tfap4Q9JIZ5 338 aa17.07■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Gm45015A0A140LII9 184 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Gm18336A0A140LIU8 765 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 PgfP49764 158 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Zdhhc9P59268 364 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Irx3P81067 507 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Rsph3aQ3UFY4 516 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms